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Changelog

(unreleased)

  • Merge pull request #5 from cantinilab/dependabot/github_actions/codecov/codecov-action-5. [Jérémie Kalfon]

    Bump codecov/codecov-action from 4 to 5

  • Bump codecov/codecov-action from 4 to 5. [dependabot[bot]]

    Bumps codecov/codecov-action from 4 to 5.

    updated-dependencies:

    • dependency-name: codecov/codecov-action dependency-type: direct:production update-type: version-update:semver-major ...

  • Merge branch 'main' of https://github.com/cantinilab/GRnnData into main. [jkobject]

  • Update README.md. [Jérémie Kalfon]

  • Add files via upload. [Jérémie Kalfon]

  • Nothing. [jkobject]

  • Merge branch 'main' of https://github.com/cantinilab/GRnnData. [maestro-jk]

  • Making it fail and few debugs. [jkobject]

  • Update README.md. [Jérémie Kalfon]

  • Merge pull request #4 from cantinilab/dependabot/github_actions/softprops/action-gh-release-2. [Jérémie Kalfon]

    Bump softprops/action-gh-release from 1 to 2

  • Bump softprops/action-gh-release from 1 to 2. [dependabot[bot]]

    Bumps softprops/action-gh-release from 1 to 2.

    updated-dependencies:

    • dependency-name: softprops/action-gh-release dependency-type: direct:production update-type: version-update:semver-major ...

  • Adding setuptools. [jkobject]

  • Added coverage and better install. [jkobject]

  • New grnndata. [maestro-jk]

1.1.4 (2024-10-08)

  • Release: version 1.1.4 🚀 [jkobject]
  • Update. [jkobject]

1.1.3 (2024-10-08)

  • Release: version 1.1.3 🚀 [jkobject]
  • Added ruff and uv. [jkobject]
  • Better tests. [jkobject]

1.1.2 (2024-09-04)

  • Release: version 1.1.2 🚀 [jkobject]
  • More tests. [jkobject]

1.1.1 (2024-09-04)

  • Release: version 1.1.1 🚀 [jkobject]
  • Makefile update. [jkobject]

1.1.0 (2024-09-04)

  • Release: version 1.1.0 🚀 [jkobject]
  • Better release process. [jkobject]
  • Format and clean. [jkobject]
  • Wip. [jkobject]
  • Pushing the tests. [jkobject]
  • Adding codecov. [jkobject]
  • Updating the makefile. [jkobject]
  • Update package version. [jkobject]

1.0.2 (2024-08-11)

  • Release: version 1.0.2 🚀 [jkobject]
  • Release: version 1.0.1 🚀 [jkobject]
  • Debug. [jkobject]
  • Adding tests. [jkobject]
  • Adding documentation. [jkobject]

1.0.0 (2024-08-06)

  • Release: version 1.0.0 🚀 [jkobject]
  • Merge branch 'dev' into main. [jkobject]
  • Debug enrichment and centrality. [jkobject]
  • Adding new plotting. [jkobject]
  • Merge branch 'dev' of https://github.com/cantinilab/GRnnData into dev. [jkobject]
  • Adding background. [maestro-jk]
  • Better background. [jkobject]
  • Some more debugs. [jkobject]
  • Solve issues. [jkobject]
  • Wip on plotting gene networks. [jkobject]
  • Making it work on new hardware. [maestro-jk]
  • Tiny side case. [jkobject]
  • Better utils. [jkobject]
  • Working with mouse. [jkobject]
  • Some new methods. [jkobject]
  • Some more install requirements and new functions. [jkobject]
  • Some more docs and better deps. [jkobject]
  • Adding some more features. [jkobject]
  • Update README.md. [Jérémie Kalfon]

1.0.1 (2024-01-11)

  • Making the release. [jkobject]

  • Working on improving grnndata. [jkobject]

  • Testing and creating a first version of GRnnData. [jkobject]

  • Finish switch to peotry. [jkobject]

  • Update LICENSE. [Jérémie Kalfon]

  • Improving and making it ready for first release. [jkobject]

  • Update. [jkobject]

  • Update extract_links to return output sorted by scores. [Rémi Trimbour]

  • Add mu file. [jkobject]

  • Merge pull request #1 from cantinilab/dependabot/github_actions/stefanzweifel/git-auto-commit- action-5. [Jérémie Kalfon]

    Bump stefanzweifel/git-auto-commit-action from 4 to 5

  • ✅ Ready to clone and code. [dependabot[bot]]

  • Bump stefanzweifel/git-auto-commit-action from 4 to 5. [dependabot[bot]]

    Bumps stefanzweifel/git-auto-commit-action from 4 to 5.

    updated-dependencies:

    • dependency-name: stefanzweifel/git-auto-commit-action dependency-type: direct:production update-type: version-update:semver-major ...

  • Merge pull request #3 from cantinilab/dependabot/github_actions/actions/setup-python-5. [Jérémie Kalfon]

    Bump actions/setup-python from 4 to 5

  • ✅ Ready to clone and code. [dependabot[bot]]

  • Bump actions/setup-python from 4 to 5. [dependabot[bot]]

    Bumps actions/setup-python from 4 to 5.

    updated-dependencies:

    • dependency-name: actions/setup-python dependency-type: direct:production update-type: version-update:semver-major ...

  • ✅ Ready to clone and code. [jkobject]

  • Initial commit. [Jérémie Kalfon]