cancervariants · korikuzma · Jun 1, 2023 · Feb 17, 2023 · Feb 20, 2023 · Feb 20, 2023
diff --git a/.gitignore b/.gitignore
@@ -38,3 +38,9 @@ pyproject.toml
 
 build/
 dynamodb_local_latest/
+
+# Env files
+.env
+
+# pickle files
+*.pkl
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
@@ -7,6 +7,7 @@ repos:
     - id: flake8
       additional_dependencies: [flake8-docstrings, flake8-quotes, flake8-import-order, flake8-annotations]
     - id: check-added-large-files
+      exclude: ^notebooks/analysis/
     - id: detect-private-key
     - id: trailing-whitespace
     - id: end-of-file-fixer
diff --git a/Pipfile b/Pipfile
@@ -17,6 +17,8 @@ variation-normalizer = {editable = true, path = "."}
 jupyter = "*"
 ipykernel = "*"
 psycopg2-binary = "*"
+civicpy = ">=3.0.0"
+python-dotenv = "*"
 
 [packages]
 "biocommons.seqrepo" = "*"

diff --git a/notebooks/analysis/civic/able_to_normalize_queries.csv b/notebooks/analysis/civic/able_to_normalize_queries.csv