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Move sync after chmod #31

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keiranmraine opened this issue Feb 16, 2019 · 3 comments

Contributor

keiranmraine commented Feb 16, 2019

cancerit/dockstore-cgpwgs#33

https://github.com/cancerit/PCAP-core/blob/develop/lib/PCAP/Threaded.pm#L294-L298

Contributor Author

keiranmraine commented Feb 16, 2019 •

edited

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Possibly just drop the chmod and change the following to execute with bash:

This:

PCAP-core/lib/PCAP/Threaded.pm

Line 268 in 693141e

system("/usr/bin/time $script 1> $out 2> $err");

To:

system("/usr/bin/time bash $script 1> $out 2> $err");

Contributor Author

keiranmraine commented Feb 20, 2019

Done in e8a6b2c

Contributor Author

keiranmraine commented Mar 7, 2019

Fixed in V4.2.7.

keiranmraine closed this as completed

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