From a4c606990dd31b3e27341317c2227a5e191dc3ca Mon Sep 17 00:00:00 2001 From: Retype GitHub Action Date: Fri, 13 Dec 2024 18:57:12 +0000 Subject: [PATCH] Refreshes Retype-generated documentation. Process triggered by inodb. --- 404.html | 8 ++++---- about-us/index.html | 8 ++++---- architecture-overview/index.html | 8 ++++---- backend-code-organization/index.html | 8 ++++---- backend-development-guidelines/index.html | 8 ++++---- create-and-publish-virtual-study/index.html | 10 +++++----- data-loading-for-developers/index.html | 8 ++++---- data-loading-maintaining-studies/index.html | 8 ++++---- .../index.html | 8 ++++---- data-loading/index.html | 10 +++++----- .../index.html | 10 +++++----- .../authenticating-users-via-ldap/index.html | 8 ++++---- .../authenticating-users-via-saml/index.html | 8 ++++---- .../index.html | 8 ++++---- .../index.html | 10 +++++----- .../user-authorization/index.html | 8 ++++---- .../index.html | 10 +++++----- deployment/customization/caching/index.html | 8 ++++---- .../index.html | 8 ++++---- .../index.html | 8 ++++---- .../portal.properties-reference/index.html | 8 ++++---- .../security.properties-reference/index.html | 10 +++++----- deployment/customization/studyview/index.html | 8 ++++---- .../build-from-source/index.html | 8 ++++---- .../deploying/index.html | 8 ++++---- .../import-the-seed-database/index.html | 8 ++++---- .../load-sample-cancer-study/index.html | 8 ++++---- .../pre-build-steps/index.html | 8 ++++---- .../software-requirements/index.html | 8 ++++---- deployment/docker/example_commands/index.html | 10 +++++----- deployment/docker/import_data/index.html | 10 +++++----- deployment/docker/index.html | 8 ++++---- .../docker/notes-for-non-linux/index.html | 8 ++++---- deployment/docker/using-keycloak/index.html | 10 +++++----- deployment/index.html | 8 ++++---- .../index.html | 8 ++++---- .../oncokb-data-access/index.html | 8 ++++---- deployment/kubernetes/index.html | 10 +++++----- .../build-different-frontend/index.html | 8 ++++---- development/cbioportal-er-diagram/index.html | 8 ++++---- development/database-versioning/index.html | 10 +++++----- development/deployment-procedure/index.html | 8 ++++---- development/documentation-site/index.html | 8 ++++---- .../feature-development-guide/index.html | 8 ++++---- .../frontend-setup-guideline/index.html | 8 ++++---- development/index.html | 8 ++++---- development/manual-test-cases/index.html | 8 ++++---- development/release-procedure/index.html | 8 ++++---- .../session-service-working/index.html | 8 ++++---- donate/index.html | 8 ++++---- downloads/index.html | 8 ++++---- file-formats/index.html | 10 +++++----- hardware-requirements/index.html | 8 ++++---- import-gene-panels/index.html | 8 ++++---- import-gene-sets/index.html | 8 ++++---- .../index.html | 8 ++++---- import-reference-genome/index.html | 8 ++++---- import-study-using-docker/index.html | 10 +++++----- imported-maf-columns/index.html | 8 ++++---- importer-tool/index.html | 8 ++++---- incremental-data-loading/index.html | 8 ++++---- index.html | 8 ++++---- inter-repository-dependencies/index.html | 8 ++++---- migration-guide/index.html | 8 ++++---- msk-maintenance/index.html | 8 ++++---- .../index.html | 8 ++++---- news-genie/index.html | 8 ++++---- news/index.html | 8 ++++---- resources/js/config.js | 2 +- rfc-list/index.html | 8 ++++---- session-service-management/index.html | 10 +++++----- sitemap.xml.gz | Bin 1402 -> 1402 bytes software-acknowledgments/index.html | 8 ++++---- study-curation-guide/index.html | 8 ++++---- testing/index.html | 10 +++++----- uninstall-docker-cbioportal/index.html | 10 +++++----- .../index.html | 10 +++++----- .../index.html | 10 +++++----- user-guide/by-page/index.html | 8 ++++---- user-guide/faq/index.html | 8 ++++---- user-guide/index.html | 8 ++++---- user-guide/new-users/index.html | 8 ++++---- user-guide/oql/index.html | 8 ++++---- user-guide/overview/index.html | 8 ++++---- using-the-dataset-validator/index.html | 10 +++++----- using-the-metaimport-script/index.html | 8 ++++---- web-api-and-clients/index.html | 10 +++++----- z-score-normalization-script/index.html | 8 ++++---- 88 files changed, 365 insertions(+), 365 deletions(-) diff --git a/404.html b/404.html index 8ca7efc1e5d..807eefcf5c2 100644 --- a/404.html +++ b/404.html @@ -3,7 +3,7 @@ - + @@ -28,11 +28,11 @@ - + - + - + diff --git a/about-us/index.html b/about-us/index.html index ed449629fcb..d09079cd53b 100644 --- a/about-us/index.html +++ b/about-us/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/architecture-overview/index.html b/architecture-overview/index.html index 0351299ba24..a0829586b8b 100644 --- a/architecture-overview/index.html +++ b/architecture-overview/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/backend-code-organization/index.html b/backend-code-organization/index.html index 4340a61b4d1..7f890aff26c 100644 --- a/backend-code-organization/index.html +++ b/backend-code-organization/index.html @@ -3,7 +3,7 @@ - + @@ -33,11 +33,11 @@ - + - + - + diff --git a/backend-development-guidelines/index.html b/backend-development-guidelines/index.html index 54dd5eaaa42..1f60cccbf96 100644 --- a/backend-development-guidelines/index.html +++ b/backend-development-guidelines/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/create-and-publish-virtual-study/index.html b/create-and-publish-virtual-study/index.html index 48d4355f980..b17ec0a86d0 100644 --- a/create-and-publish-virtual-study/index.html +++ b/create-and-publish-virtual-study/index.html @@ -3,7 +3,7 @@ - + @@ -31,12 +31,12 @@ - + - + - - + + diff --git a/data-loading-for-developers/index.html b/data-loading-for-developers/index.html index a2635bf60b0..b06495d7af1 100644 --- a/data-loading-for-developers/index.html +++ b/data-loading-for-developers/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/data-loading-maintaining-studies/index.html b/data-loading-maintaining-studies/index.html index 88e337633ab..42ad40b8124 100644 --- a/data-loading-maintaining-studies/index.html +++ b/data-loading-maintaining-studies/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/data-loading-tips-and-best-practices/index.html b/data-loading-tips-and-best-practices/index.html index 1f5bd0097dd..24e74cb582d 100644 --- a/data-loading-tips-and-best-practices/index.html +++ b/data-loading-tips-and-best-practices/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/data-loading/index.html b/data-loading/index.html index 2408538eb9a..71a36e76e06 100644 --- a/data-loading/index.html +++ b/data-loading/index.html @@ -3,7 +3,7 @@ - + @@ -31,12 +31,12 @@ - + - + - - + + diff --git a/deployment/authorization-and-authentication/authenticating-and-authorizing-users-via-keycloak/index.html b/deployment/authorization-and-authentication/authenticating-and-authorizing-users-via-keycloak/index.html index be2a658c6ea..994f110f82e 100644 --- a/deployment/authorization-and-authentication/authenticating-and-authorizing-users-via-keycloak/index.html +++ b/deployment/authorization-and-authentication/authenticating-and-authorizing-users-via-keycloak/index.html @@ -3,7 +3,7 @@ - + @@ -33,12 +33,12 @@ - + - + - - + + diff --git a/deployment/authorization-and-authentication/authenticating-users-via-ldap/index.html b/deployment/authorization-and-authentication/authenticating-users-via-ldap/index.html index 03cc2e83dd6..d4167fde219 100644 --- a/deployment/authorization-and-authentication/authenticating-users-via-ldap/index.html +++ b/deployment/authorization-and-authentication/authenticating-users-via-ldap/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/deployment/authorization-and-authentication/authenticating-users-via-saml/index.html b/deployment/authorization-and-authentication/authenticating-users-via-saml/index.html index 65ca3bd63a0..a6e0ebb2f79 100644 --- a/deployment/authorization-and-authentication/authenticating-users-via-saml/index.html +++ b/deployment/authorization-and-authentication/authenticating-users-via-saml/index.html @@ -3,7 +3,7 @@ - + @@ -33,11 +33,11 @@ - + - + - + diff --git a/deployment/authorization-and-authentication/authenticating-users-via-tokens/index.html b/deployment/authorization-and-authentication/authenticating-users-via-tokens/index.html index 2c4fe5c9102..677612c81dc 100644 --- a/deployment/authorization-and-authentication/authenticating-users-via-tokens/index.html +++ b/deployment/authorization-and-authentication/authenticating-users-via-tokens/index.html @@ -3,7 +3,7 @@ - + @@ -33,11 +33,11 @@ - + - + - + diff --git a/deployment/authorization-and-authentication/keycloak-api-access-and-user-creation/index.html b/deployment/authorization-and-authentication/keycloak-api-access-and-user-creation/index.html index e97c8cb00f1..284d0e472ea 100644 --- a/deployment/authorization-and-authentication/keycloak-api-access-and-user-creation/index.html +++ b/deployment/authorization-and-authentication/keycloak-api-access-and-user-creation/index.html @@ -3,7 +3,7 @@ - + @@ -33,12 +33,12 @@ - + - + - - + + diff --git a/deployment/authorization-and-authentication/user-authorization/index.html b/deployment/authorization-and-authentication/user-authorization/index.html index b14ce7da28c..42a35c8774a 100644 --- a/deployment/authorization-and-authentication/user-authorization/index.html +++ b/deployment/authorization-and-authentication/user-authorization/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/deployment/customization/application.properties-reference/index.html b/deployment/customization/application.properties-reference/index.html index 1c82438af33..a86a567bd99 100644 --- a/deployment/customization/application.properties-reference/index.html +++ b/deployment/customization/application.properties-reference/index.html @@ -3,7 +3,7 @@ - + @@ -33,12 +33,12 @@ - + - + - - + + diff --git a/deployment/customization/caching/index.html b/deployment/customization/caching/index.html index 30e90146c21..4f2f43dc700 100644 --- a/deployment/customization/caching/index.html +++ b/deployment/customization/caching/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/deployment/customization/customizing-your-instance-of-cbioportal/index.html b/deployment/customization/customizing-your-instance-of-cbioportal/index.html index 500b04b926d..58c0542f7ca 100644 --- a/deployment/customization/customizing-your-instance-of-cbioportal/index.html +++ b/deployment/customization/customizing-your-instance-of-cbioportal/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/deployment/customization/download_custom_buttons-reference/index.html b/deployment/customization/download_custom_buttons-reference/index.html index 0aea4f78a0e..d6472658104 100644 --- a/deployment/customization/download_custom_buttons-reference/index.html +++ b/deployment/customization/download_custom_buttons-reference/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/deployment/customization/portal.properties-reference/index.html b/deployment/customization/portal.properties-reference/index.html index 9a71a930fd3..023aa95d875 100644 --- a/deployment/customization/portal.properties-reference/index.html +++ b/deployment/customization/portal.properties-reference/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/deployment/customization/security.properties-reference/index.html b/deployment/customization/security.properties-reference/index.html index 463b9754295..7e895a2ca9c 100644 --- a/deployment/customization/security.properties-reference/index.html +++ b/deployment/customization/security.properties-reference/index.html @@ -3,7 +3,7 @@ - + @@ -31,12 +31,12 @@ - + - + - - + + diff --git a/deployment/customization/studyview/index.html b/deployment/customization/studyview/index.html index f324647d634..006f34cdfd8 100644 --- a/deployment/customization/studyview/index.html +++ b/deployment/customization/studyview/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/deployment/deploy-without-docker/build-from-source/index.html b/deployment/deploy-without-docker/build-from-source/index.html index f9dace90bb9..b57d3ed39a9 100644 --- a/deployment/deploy-without-docker/build-from-source/index.html +++ b/deployment/deploy-without-docker/build-from-source/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/deployment/deploy-without-docker/deploying/index.html b/deployment/deploy-without-docker/deploying/index.html index 6c7befd86d5..31affb8a76b 100644 --- a/deployment/deploy-without-docker/deploying/index.html +++ b/deployment/deploy-without-docker/deploying/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/deployment/deploy-without-docker/import-the-seed-database/index.html b/deployment/deploy-without-docker/import-the-seed-database/index.html index 7cc70a048a2..d6fb592f40f 100644 --- a/deployment/deploy-without-docker/import-the-seed-database/index.html +++ b/deployment/deploy-without-docker/import-the-seed-database/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/deployment/deploy-without-docker/load-sample-cancer-study/index.html b/deployment/deploy-without-docker/load-sample-cancer-study/index.html index 98778f6e1d5..c8a3d2eea12 100644 --- a/deployment/deploy-without-docker/load-sample-cancer-study/index.html +++ b/deployment/deploy-without-docker/load-sample-cancer-study/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/deployment/deploy-without-docker/pre-build-steps/index.html b/deployment/deploy-without-docker/pre-build-steps/index.html index 02a365c39cb..b0036c4f822 100644 --- a/deployment/deploy-without-docker/pre-build-steps/index.html +++ b/deployment/deploy-without-docker/pre-build-steps/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/deployment/deploy-without-docker/software-requirements/index.html b/deployment/deploy-without-docker/software-requirements/index.html index 2df67012fdc..8d9c2abf778 100644 --- a/deployment/deploy-without-docker/software-requirements/index.html +++ b/deployment/deploy-without-docker/software-requirements/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/deployment/docker/example_commands/index.html b/deployment/docker/example_commands/index.html index dac64b4436e..e195131b6ce 100644 --- a/deployment/docker/example_commands/index.html +++ b/deployment/docker/example_commands/index.html @@ -3,7 +3,7 @@ - + @@ -31,12 +31,12 @@ - + - + - - + + diff --git a/deployment/docker/import_data/index.html b/deployment/docker/import_data/index.html index 754fbd57922..409c1c0e687 100644 --- a/deployment/docker/import_data/index.html +++ b/deployment/docker/import_data/index.html @@ -3,7 +3,7 @@ - + @@ -31,12 +31,12 @@ - + - + - - + + diff --git a/deployment/docker/index.html b/deployment/docker/index.html index 86b31d3ea69..d6d0bca6600 100644 --- a/deployment/docker/index.html +++ b/deployment/docker/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/deployment/docker/notes-for-non-linux/index.html b/deployment/docker/notes-for-non-linux/index.html index 19ad2343c05..1b4ffeeb3a6 100644 --- a/deployment/docker/notes-for-non-linux/index.html +++ b/deployment/docker/notes-for-non-linux/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/deployment/docker/using-keycloak/index.html b/deployment/docker/using-keycloak/index.html index 4892d7e2df4..986d85402ca 100644 --- a/deployment/docker/using-keycloak/index.html +++ b/deployment/docker/using-keycloak/index.html @@ -3,7 +3,7 @@ - + @@ -31,12 +31,12 @@ - + - + - - + + diff --git a/deployment/index.html b/deployment/index.html index a7b073569a5..19fe5c08f91 100644 --- a/deployment/index.html +++ b/deployment/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/deployment/integration-with-other-webservices/index.html b/deployment/integration-with-other-webservices/index.html index 7fba1f13e80..7684d5b122f 100644 --- a/deployment/integration-with-other-webservices/index.html +++ b/deployment/integration-with-other-webservices/index.html @@ -3,7 +3,7 @@ - + @@ -28,11 +28,11 @@ - + - + - + diff --git a/deployment/integration-with-other-webservices/oncokb-data-access/index.html b/deployment/integration-with-other-webservices/oncokb-data-access/index.html index 174dc5c84d0..1417a501cb2 100644 --- a/deployment/integration-with-other-webservices/oncokb-data-access/index.html +++ b/deployment/integration-with-other-webservices/oncokb-data-access/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/deployment/kubernetes/index.html b/deployment/kubernetes/index.html index 4d5af016fcc..699b2dc70d1 100644 --- a/deployment/kubernetes/index.html +++ b/deployment/kubernetes/index.html @@ -3,7 +3,7 @@ - + @@ -31,12 +31,12 @@ - + - + - - + + diff --git a/development/build-different-frontend/index.html b/development/build-different-frontend/index.html index 12c7c6e77c0..23bb2d412e9 100644 --- a/development/build-different-frontend/index.html +++ b/development/build-different-frontend/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/development/cbioportal-er-diagram/index.html b/development/cbioportal-er-diagram/index.html index 4483edf4be1..0d2b4bff32c 100644 --- a/development/cbioportal-er-diagram/index.html +++ b/development/cbioportal-er-diagram/index.html @@ -3,7 +3,7 @@ - + @@ -33,11 +33,11 @@ - + - + - + diff --git a/development/database-versioning/index.html b/development/database-versioning/index.html index ffa0cf0a827..fd7c70d6ef7 100644 --- a/development/database-versioning/index.html +++ b/development/database-versioning/index.html @@ -3,7 +3,7 @@ - + @@ -31,12 +31,12 @@ - + - + - - + + diff --git a/development/deployment-procedure/index.html b/development/deployment-procedure/index.html index e713aebb905..5780edf0972 100644 --- a/development/deployment-procedure/index.html +++ b/development/deployment-procedure/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/development/documentation-site/index.html b/development/documentation-site/index.html index 2f6d3e7640a..cd844055dd8 100644 --- a/development/documentation-site/index.html +++ b/development/documentation-site/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/development/feature-development-guide/index.html b/development/feature-development-guide/index.html index eac19efd6c0..e5d2aaacf4b 100644 --- a/development/feature-development-guide/index.html +++ b/development/feature-development-guide/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/development/frontend-setup-guideline/index.html b/development/frontend-setup-guideline/index.html index 55b94898638..8befcba8bf5 100644 --- a/development/frontend-setup-guideline/index.html +++ b/development/frontend-setup-guideline/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/development/index.html b/development/index.html index fc2f01d2417..e66883dea00 100644 --- a/development/index.html +++ b/development/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/development/manual-test-cases/index.html b/development/manual-test-cases/index.html index 5f362c4c77d..d216b75bbcb 100644 --- a/development/manual-test-cases/index.html +++ b/development/manual-test-cases/index.html @@ -3,7 +3,7 @@ - + @@ -31,11 +31,11 @@ - + - + - + diff --git a/development/release-procedure/index.html b/development/release-procedure/index.html index 32151c27512..ee073360395 100644 --- a/development/release-procedure/index.html +++ 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