How to reproduce:

• Go to the RAS/RAF alterations in colorectal cancer example
• Try removing any of the genes by using the Remove track option
  

It doesn't remove the track on the first try. After the first try the feature works as expected.

Looks like when we have an QOL query it is not possible to remove the gene with the OQL at all.

To reproduce

• Go to https://deploy-preview-4907--cbioportalfrontend.netlify.app/results/oncoprint?cancer_study_list=coadread_tcga_pub&cancer_study_id=coadread_tcga_pub&genetic_profile_ids_PROFILE_MUTATION_EXTENDED=coadread_tcga_pub_mutations&genetic_profile_ids_PROFILE_COPY_NUMBER_ALTERATION=coadread_tcga_pub_gistic&Z_SCORE_THRESHOLD=2.0&case_set_id=coadread_tcga_pub_nonhypermut&gene_list=KRAS%2520NRAS%2520BRAF%253AV600E&gene_set_choice=user-defined-list&RPPA_SCORE_THRESHOLD=2.0&profileFilter=mutations%2Cgistic&geneset_list=%20&tab_index=tab_visualize&Action=Submit
• Try removing BRAF
  

It is not possible to remove BRAF on second try either.

Small update.

gene_list parameter in the example query (which is not working):
gene_list=KRAS%20NRAS%20BRAF (KRAS NRAS BRAF)
after the removal try, gene_list is changed to the following:
gene_list=%250A%2520KRAS%2520NRAS%2520BRAF
And then removing is working, you can check it by opening the original URI with modified gene_list

Unfortunately, I wasn't able to reproduce the issue described in the previous message (removing is working on the first time)

I'm new here, and I have no expertise in the medical area, but are there any other symptoms that something is wrong with the querying? It looks like a badly hardcoded URI with the example.

*when I'm querying the same data from the main screen, I receive such URL (removing working fine) https://www.cbioportal.org/results/oncoprint?cancer_study_list=coadread_tcga_pub&Z_SCORE_THRESHOLD=2.0&RPPA_SCORE_THRESHOLD=2.0&profileFilter=mutations%2Cgistic&case_set_id=coadread_tcga_pub_cna_seq&gene_list=KRAS%2520NRAS%2520BRAF&geneset_list=%20&tab_index=tab_visualize&Action=Submit

TP53 and MDM2/4 alterations in GBM example is not working as well