From 0bd07d9ad36d045c119cdf55bc6bc53a9cbc42c1 Mon Sep 17 00:00:00 2001
From: David Lougheed <david.lougheed@gmail.com>
Date: Tue, 16 Jan 2024 15:02:49 -0500
Subject: [PATCH] chore(scripts): calculate-top-peaks: increase chunk size +
 fix log statement

---
 scripts/calculate-top-peaks.mjs | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/scripts/calculate-top-peaks.mjs b/scripts/calculate-top-peaks.mjs
index b36eaab3..26623972 100644
--- a/scripts/calculate-top-peaks.mjs
+++ b/scripts/calculate-top-peaks.mjs
@@ -12,7 +12,7 @@ const chromSizes = chromosomeSizesByAssemblyID[config.assembly ?? "hg19"];
 const minPValue = envConfig.PLOT_MANHATTAN_MIN_P_VAL;
 const binSize = envConfig.PLOT_MANHATTAN_BIN_SIZE;
 
-const BINS_CHUNK_SIZE = 30;
+const BINS_CHUNK_SIZE = 50;
 
 for (const chrom in chromSizes) {
   const size = chromSizes[chrom];
@@ -63,7 +63,7 @@ for (const chrom in chromSizes) {
       })();
     }));
 
-    console.log(`chr${chrom}: processed ${bins.length}/${nBins} bins`);
+    console.log(`chr${chrom}: processed ${nBins - bins.length}/${nBins} bins`);
   }
 
   console.log(`done chr${chrom}`);