diff --git a/pipes/WDL/tasks/tasks_sarscov2.wdl b/pipes/WDL/tasks/tasks_sarscov2.wdl index 2619344dd..b39b76009 100644 --- a/pipes/WDL/tasks/tasks_sarscov2.wdl +++ b/pipes/WDL/tasks/tasks_sarscov2.wdl @@ -10,7 +10,7 @@ task pangolin_one_sample { Float? max_ambig String? analysis_mode Boolean update_dbs_now=false - String docker = "quay.io/staphb/pangolin:4.0.4-pdata-1.2.133" + String docker = "quay.io/staphb/pangolin:4.0.5-pdata-1.3" } String basename = basename(genome_fasta, ".fasta") command <<< @@ -91,7 +91,7 @@ task pangolin_many_samples { String? analysis_mode Boolean update_dbs_now=false String basename - String docker = "quay.io/staphb/pangolin:4.0.4-pdata-1.2.133" + String docker = "quay.io/staphb/pangolin:4.0.5-pdata-1.3" } command <<< set -ex diff --git a/requirements-modules.txt b/requirements-modules.txt index 18ebc5e81..ea3afe7db 100644 --- a/requirements-modules.txt +++ b/requirements-modules.txt @@ -7,5 +7,5 @@ broadinstitute/beast-beagle-cuda=1.10.5pre broadinstitute/ncbi-tools=2.10.7.10 nextstrain/base=build-20211012T204409Z andersenlabapps/ivar=1.3.1 -quay.io/staphb/pangolin=4.0.4-pdata-1.2.133 +quay.io/staphb/pangolin=4.0.5-pdata-1.3 nextstrain/nextclade=1.11.0