diff --git a/assembly.py b/assembly.py index 175b113f..807ee560 100755 --- a/assembly.py +++ b/assembly.py @@ -402,7 +402,7 @@ def skani_contigs_to_refs(inContigs, inRefs, out_skani_dist, out_skani_dist_filt skani = assemble.skani.SkaniTool() clusters = skani.find_reference_clusters(inRefs, threads=threads) - skani.find_closest_references(inContigs, inRefs, out_skani_dist, threads=threads) + skani.find_closest_reference(inContigs, inRefs, out_skani_dist, threads=threads) refs_hit = set() refs_hit_by_cluster = set()