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Releases: broadinstitute/hidive

v0.1.67

08 Oct 02:46
a57b978
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New command to recruit a subset of reads from rescued reads. New functionality to remove tangles from de Bruijn graphs (#27)

v0.1.66

06 Oct 23:31
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Minor bug fixes for things that broke during the merge

v0.1.65

05 Oct 23:25
cfe369f
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Kvg mldbg (#26)

  • Simplified much of the logic around creating the joint assembly graph

  • Added a read error correction command

  • Implemented Patterson et al., 2015 wMEC algorithm for read-based phasing and error correction

  • Improved tip cleaning

v0.1.64

29 Aug 20:22
716b284
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cleaned up assemble.rs (#24)

v0.1.63

27 Aug 21:35
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Minor fixes to Cargo.toml

v0.1.62

27 Aug 21:27
d4f3620
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Fix Docker build issue in previous version (#22)

  • add abpoa functions in replace of spoa

  • revise docker

v0.1.61

27 Aug 20:21
a6e7c15
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Fixed some build issues (#23)

v0.1.60

27 Aug 02:25
1662bca
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Kvg rescue and filter (#21)

  • A completely written (and now working) read error corrector

  • Rewrote filter command to further filter rescued reads by alignment to a draft assembly of long reads

v0.1.59

14 Aug 20:17
2aeeb2a
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Added KNN and MIP function to assemble.rs. (#20)

v0.1.58

07 Aug 12:06
3e8eff5
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Kvg clean graph (#19)

  • Implemented tip cleaning, graph cleaning, and read correction