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setup.py
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setup.py
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import re
import setuptools
import subprocess
import sys
try:
result = subprocess.run(
[sys.executable, "-m", "pip", "show", "pkg_utils"],
check=True, capture_output=True)
match = re.search(r'\nVersion: (.*?)\n', result.stdout.decode(), re.DOTALL)
assert match and tuple(match.group(1).split('.')) >= ('0', '0', '5')
except (subprocess.CalledProcessError, AssertionError):
subprocess.run(
[sys.executable, "-m", "pip", "install", "-U", "pkg_utils"],
check=True)
import os
import pkg_utils
name = 'biosimulators_pysces'
dirname = os.path.dirname(__file__)
# get package metadata
md = pkg_utils.get_package_metadata(dirname, name)
# install package
setuptools.setup(
name=name,
version=md.version,
description=("BioSimulators-compliant command-line interface to "
"the PySCeS simulation program <http://pysces.sourceforge.net/>."),
long_description=md.long_description,
url="https://github.com/biosimulators/Biosimulators_PySCeS>",
download_url="https://github.com/biosimulators/Biosimulators_PySCeS",
author='Center for Reproducible Biomedical Modeling',
author_email="[email protected]",
license="MIT",
keywords=['BioSimulators', 'systems biology', 'computational biology', 'mathematical model',
'kinetic model', 'simulation', 'SBML', 'SED-ML', 'COMBINE', 'OMEX'],
packages=setuptools.find_packages(exclude=['tests', 'tests.*']),
install_requires=md.install_requires,
extras_require=md.extras_require,
tests_require=md.tests_require,
dependency_links=md.dependency_links,
classifiers=[
'Development Status :: 3 - Alpha',
'Intended Audience :: Science/Research',
'License :: OSI Approved :: MIT License',
'Topic :: Scientific/Engineering :: Bio-Informatics',
],
entry_points={
'console_scripts': [
'biosimulators-pysces = biosimulators_pysces.__main__:main',
],
},
)