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poetry.lock
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# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand.
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name = "accessible-pygments"
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description = "A collection of accessible pygments styles"
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python-versions = ">=3.9"
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tests = ["hypothesis", "pytest"]
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description = "A light, configurable Sphinx theme"
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python-versions = ">=3.10"
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description = "Screen-scraping library"
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cchardet = ["cchardet"]
chardet = ["chardet"]
charset-normalizer = ["charset-normalizer"]
html5lib = ["html5lib"]
lxml = ["lxml"]
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description = "Freely available tools for computational molecular biology."
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python-versions = ">=3.9"
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numpy = "*"
[[package]]
name = "biosimulators-utils"
version = "0.2.3"
description = "description"
optional = false
python-versions = "<4.0,>=3.10"
files = [
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appdirs = "*"
biopython = "*"
capturer = {version = "*", optional = true, markers = "extra == \"logging\""}
cement = "*"
evalidate = ">=2.0"
h5py = "*"
kisao = ">=2.33"
lxml = "*"
matplotlib = "*"
mpmath = "*"
natsort = "*"
networkx = ">=2.6"
numpy = "*"
openpyxl = "*"
pandas = "*"
pronto = ">=2.4"
pyomexmeta = ">=1.2.13"
python-dateutil = "*"
python-libcombine = ">=0.2.11"
python-libsbml = {version = "*", optional = true, markers = "extra == \"sbml\""}
python-libsedml = ">=2.0.16"
pyyaml = "*"
rdflib = "*"
regex = "*"
requests = "*"
setuptools = ">=74.1.1"
simplejson = "*"
termcolor = "*"
uritools = "*"
yamldown = "*"
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bngl = ["bionetgen (>=0.8.4)", "libroadrunner (>=2.7.0,<3.0.0)"]
cellml = ["libcellml (>=0.5.0)"]
containers = ["docker (>=4.4)"]
escher = ["bezier"]
lems = ["pint", "pylems", "pyneuroml (>=0.5.18)"]
logging = ["capturer"]
neuroml = ["libneuroml", "pyneuroml (>=0.5.18)"]
sbml = ["python-libsbml"]
simularium = ["simulariumio"]
smoldyn = ["smoldyn (>=2.66)"]
[[package]]
name = "capturer"
version = "3.0"
description = "Easily capture stdout/stderr of the current process and subprocesses"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
files = [
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humanfriendly = ">=8.0"
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description = "Application Framework for Python"
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python-versions = ">=3.8"
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colorlog = ["colorlog"]
docs = ["guzzle_sphinx_theme", "sphinx", "sphinx_rtd_theme", "sphinxcontrib-napoleon"]
generate = ["pyYaml"]
jinja2 = ["jinja2"]
memcached = ["pylibmc"]
mustache = ["pystache"]
redis = ["redis"]
tabulate = ["tabulate"]
watchdog = ["watchdog"]
yaml = ["pyYaml"]
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