| layout | permalink | title | header1 | header2 | image | keywords | description | instructors | length |
|---|---|---|---|---|---|---|---|---|---|
workshop_main_4day |
/IDE_2023_tools |
Infectious Disease Genomic Epidemiology |
Workshop Pages for Students |
Infectious Disease Genomic Epidemiology 2023 |
/site_images/CBW_epidemiology_icon.png |
Infectious Disease Genomic Epidemiology |
Infectious Disease Genomic Epidemiology |
4 days |
Install Miniconda by following the instructoion at Miniconda official site
download signalncovtools_yaml.yaml
conda env create -f ./signalncovtools_yaml.yaml -n signalcovtools
conda create --name rgi --channel conda-forge --channel bioconda --channel defaults rgi
pip install hAMRonization
download environment.yml
conda env create -f module8-emerging-pathogen.yaml -n module8-emerging-pathogen