(qiime2-2021.11) xxxxxxx:~/share/2-12-21$ pip install empress Collecting empress Using cached empress-1.2.0-py3-none-any.whl Requirement already satisfied: emperor>=1.0.2 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from empress) (1.0.3) Collecting iow Using cached iow-0.1.3.tar.gz (899 kB) Preparing metadata (setup.py) ... done Requirement already satisfied: scikit-bio in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from empress) (0.5.6) Requirement already satisfied: pandas in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from empress) (1.2.5) Requirement already satisfied: click in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from empress) (7.1.2) Requirement already satisfied: biom-format in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from empress) (2.1.10) Requirement already satisfied: numpy in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from empress) (1.21.4) Requirement already satisfied: jinja2 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from empress) (3.0.3) Requirement already satisfied: scipy in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from empress) (1.7.2) Requirement already satisfied: future in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from emperor>=1.0.2->empress) (0.18.2) Requirement already satisfied: MarkupSafe>=2.0 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from jinja2->empress) (2.0.1) Requirement already satisfied: matplotlib>=1.4.3 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from scikit-bio->empress) (3.5.0) Requirement already satisfied: lockfile>=0.10.2 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from scikit-bio->empress) (0.12.2) Requirement already satisfied: IPython>=3.2.0 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from scikit-bio->empress) (7.29.0) Requirement already satisfied: CacheControl>=0.11.5 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from scikit-bio->empress) (0.12.10) Requirement already satisfied: natsort>=4.0.3 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from scikit-bio->empress) (8.0.0) Requirement already satisfied: hdmedians>=0.13 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from scikit-bio->empress) (0.14.2) Requirement already satisfied: scikit-learn>=0.19.1 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from scikit-bio->empress) (0.24.1) Requirement already satisfied: decorator>=3.4.2 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from scikit-bio->empress) (4.4.2) Requirement already satisfied: python-dateutil>=2.7.3 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from pandas->empress) (2.8.2) Requirement already satisfied: pytz>=2017.3 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from pandas->empress) (2021.3) Requirement already satisfied: cython>=0.29 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from biom-format->empress) (0.29.24) Requirement already satisfied: six>=1.10.0 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from biom-format->empress) (1.16.0) Requirement already satisfied: h5py in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from biom-format->empress) (3.3.0) Requirement already satisfied: nose>=1.3.7 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from iow->empress) (1.3.7) Requirement already satisfied: requests in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from CacheControl>=0.11.5->scikit-bio->empress) (2.25.1) Requirement already satisfied: msgpack>=0.5.2 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from CacheControl>=0.11.5->scikit-bio->empress) (1.0.2) Requirement already satisfied: pygments in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from IPython>=3.2.0->scikit-bio->empress) (2.10.0) Requirement already satisfied: traitlets>=4.2 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from IPython>=3.2.0->scikit-bio->empress) (5.1.1) Requirement already satisfied: prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from IPython>=3.2.0->scikit-bio->empress) (3.0.22) Requirement already satisfied: pickleshare in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from IPython>=3.2.0->scikit-bio->empress) (0.7.5) Requirement already satisfied: jedi>=0.16 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from IPython>=3.2.0->scikit-bio->empress) (0.18.1) Requirement already satisfied: backcall in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from IPython>=3.2.0->scikit-bio->empress) (0.2.0) Requirement already satisfied: matplotlib-inline in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from IPython>=3.2.0->scikit-bio->empress) (0.1.3) Requirement already satisfied: setuptools>=18.5 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from IPython>=3.2.0->scikit-bio->empress) (59.2.0) Requirement already satisfied: pexpect>4.3 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from IPython>=3.2.0->scikit-bio->empress) (4.8.0) Requirement already satisfied: fonttools>=4.22.0 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from matplotlib>=1.4.3->scikit-bio->empress) (4.28.1) Requirement already satisfied: cycler>=0.10 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from matplotlib>=1.4.3->scikit-bio->empress) (0.11.0) Requirement already satisfied: packaging>=20.0 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from matplotlib>=1.4.3->scikit-bio->empress) (21.3) Requirement already satisfied: pyparsing>=2.2.1 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from matplotlib>=1.4.3->scikit-bio->empress) (3.0.6) Requirement already satisfied: pillow>=6.2.0 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from matplotlib>=1.4.3->scikit-bio->empress) (8.4.0) Requirement already satisfied: kiwisolver>=1.0.1 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from matplotlib>=1.4.3->scikit-bio->empress) (1.3.2) Requirement already satisfied: joblib>=0.11 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from scikit-learn>=0.19.1->scikit-bio->empress) (1.1.0) Requirement already satisfied: threadpoolctl>=2.0.0 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from scikit-learn>=0.19.1->scikit-bio->empress) (3.0.0) Requirement already satisfied: parso<0.9.0,>=0.8.0 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from jedi>=0.16->IPython>=3.2.0->scikit-bio->empress) (0.8.2) Requirement already satisfied: ptyprocess>=0.5 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from pexpect>4.3->IPython>=3.2.0->scikit-bio->empress) (0.7.0) Requirement already satisfied: wcwidth in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0->IPython>=3.2.0->scikit-bio->empress) (0.2.5) Requirement already satisfied: certifi>=2017.4.17 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from requests->CacheControl>=0.11.5->scikit-bio->empress) (2021.10.8) Requirement already satisfied: idna<3,>=2.5 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from requests->CacheControl>=0.11.5->scikit-bio->empress) (2.10) Requirement already satisfied: urllib3<1.27,>=1.21.1 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from requests->CacheControl>=0.11.5->scikit-bio->empress) (1.26.7) Requirement already satisfied: chardet<5,>=3.0.2 in /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages (from requests->CacheControl>=0.11.5->scikit-bio->empress) (4.0.0) Building wheels for collected packages: iow Building wheel for iow (setup.py) ... error ERROR: Command errored out with exit status 1: command: /home/oliver/miniconda3/envs/qiime2-2021.11/bin/python3.8 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-w97_8tx7/iow_64955545b9984426afb4cc99c1081b33/setup.py'"'"'; __file__='"'"'/tmp/pip-install-w97_8tx7/iow_64955545b9984426afb4cc99c1081b33/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-dkh5d3vl cwd: /tmp/pip-install-w97_8tx7/iow_64955545b9984426afb4cc99c1081b33/ Complete output (44 lines): running bdist_wheel running build running build_py make: Entering directory '/tmp/pip-install-w97_8tx7/iow_64955545b9984426afb4cc99c1081b33/BitArray' /home/oliver/miniconda3/envs/qiime2-2021.11/bin/x86_64-conda-linux-gnu-cc -Wall -Wextra -Wc++-compat -I. -O4 -fPIC -c bit_array.c -o bit_array.o bit_array.c: In function 'hashword2': bit_array.c:3099:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 3099 | case 3 : c+=k[2]; | ~^~~~~~ bit_array.c:3100:3: note: here 3100 | case 2 : b+=k[1]; | ^~~~ bit_array.c:3100:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 3100 | case 2 : b+=k[1]; | ~^~~~~~ bit_array.c:3101:3: note: here 3101 | case 1 : a+=k[0]; | ^~~~ ar -csru libbitarr.a bit_array.o make: ar: No such file or directory make: *** [Makefile:25: libbitarr.a] Error 127 make: Leaving directory '/tmp/pip-install-w97_8tx7/iow_64955545b9984426afb4cc99c1081b33/BitArray' creating build creating build/lib.linux-x86_64-3.8 creating build/lib.linux-x86_64-3.8/bp copying bp/_parse_py.py -> build/lib.linux-x86_64-3.8/bp copying bp/_bp_py.py -> build/lib.linux-x86_64-3.8/bp copying bp/__init__.py -> build/lib.linux-x86_64-3.8/bp running build_ext building 'bp._bp' extension creating build/temp.linux-x86_64-3.8 creating build/temp.linux-x86_64-3.8/bp /home/oliver/miniconda3/envs/qiime2-2021.11/bin/x86_64-conda-linux-gnu-cc -Wno-unused-result -Wsign-compare -DNDEBUG -fwrapv -O2 -Wall -Wstrict-prototypes -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -pipe -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -pipe -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /home/oliver/miniconda3/envs/qiime2-2021.11/include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /home/oliver/miniconda3/envs/qiime2-2021.11/include -fPIC -I./bp -IBitArray/ -I/home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages/numpy/core/include -IBitArray/ -I/home/oliver/miniconda3/envs/qiime2-2021.11/include/python3.8 -c bp/_bp.c -o build/temp.linux-x86_64-3.8/bp/_bp.o In file included from /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, from /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:4, from bp/_bp.c:645: /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ x86_64-conda_cos6-linux-gnu-gcc -pthread -shared -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-rpath,/home/oliver/miniconda3/envs/qiime2-2021.11/lib -L/home/oliver/miniconda3/envs/qiime2-2021.11/lib -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-rpath,/home/oliver/miniconda3/envs/qiime2-2021.11/lib -L/home/oliver/miniconda3/envs/qiime2-2021.11/lib -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,-rpath,/home/oliver/miniconda3/envs/qiime2-2021.11/lib -Wl,-rpath-link,/home/oliver/miniconda3/envs/qiime2-2021.11/lib -L/home/oliver/miniconda3/envs/qiime2-2021.11/lib -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /home/oliver/miniconda3/envs/qiime2-2021.11/include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /home/oliver/miniconda3/envs/qiime2-2021.11/include build/temp.linux-x86_64-3.8/bp/_bp.o -LBitArray/ -lbitarr -o build/lib.linux-x86_64-3.8/bp/_bp.cpython-38-x86_64-linux-gnu.so /home/oliver/miniconda3/envs/qiime2-2021.11/bin/../lib/gcc/x86_64-conda-linux-gnu/9.4.0/../../../../x86_64-conda-linux-gnu/bin/ld: cannot find -lbitarr collect2: error: ld returned 1 exit status error: command 'x86_64-conda_cos6-linux-gnu-gcc' failed with exit status 1 ---------------------------------------- ERROR: Failed building wheel for iow Running setup.py clean for iow Failed to build iow Installing collected packages: iow, empress Running setup.py install for iow ... error ERROR: Command errored out with exit status 1: command: /home/oliver/miniconda3/envs/qiime2-2021.11/bin/python3.8 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-w97_8tx7/iow_64955545b9984426afb4cc99c1081b33/setup.py'"'"'; __file__='"'"'/tmp/pip-install-w97_8tx7/iow_64955545b9984426afb4cc99c1081b33/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-e5eqi_t5/install-record.txt --single-version-externally-managed --compile --install-headers /home/oliver/miniconda3/envs/qiime2-2021.11/include/python3.8/iow cwd: /tmp/pip-install-w97_8tx7/iow_64955545b9984426afb4cc99c1081b33/ Complete output (32 lines): running install /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py make: Entering directory '/tmp/pip-install-w97_8tx7/iow_64955545b9984426afb4cc99c1081b33/BitArray' ar -csru libbitarr.a bit_array.o make: ar: No such file or directory make: *** [Makefile:25: libbitarr.a] Error 127 make: Leaving directory '/tmp/pip-install-w97_8tx7/iow_64955545b9984426afb4cc99c1081b33/BitArray' creating build creating build/lib.linux-x86_64-3.8 creating build/lib.linux-x86_64-3.8/bp copying bp/_parse_py.py -> build/lib.linux-x86_64-3.8/bp copying bp/_bp_py.py -> build/lib.linux-x86_64-3.8/bp copying bp/__init__.py -> build/lib.linux-x86_64-3.8/bp running build_ext building 'bp._bp' extension creating build/temp.linux-x86_64-3.8 creating build/temp.linux-x86_64-3.8/bp /home/oliver/miniconda3/envs/qiime2-2021.11/bin/x86_64-conda-linux-gnu-cc -Wno-unused-result -Wsign-compare -DNDEBUG -fwrapv -O2 -Wall -Wstrict-prototypes -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -pipe -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -pipe -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /home/oliver/miniconda3/envs/qiime2-2021.11/include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /home/oliver/miniconda3/envs/qiime2-2021.11/include -fPIC -I./bp -IBitArray/ -I/home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages/numpy/core/include -IBitArray/ -I/home/oliver/miniconda3/envs/qiime2-2021.11/include/python3.8 -c bp/_bp.c -o build/temp.linux-x86_64-3.8/bp/_bp.o In file included from /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, from /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:4, from bp/_bp.c:645: /home/oliver/miniconda3/envs/qiime2-2021.11/lib/python3.8/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ x86_64-conda_cos6-linux-gnu-gcc -pthread -shared -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-rpath,/home/oliver/miniconda3/envs/qiime2-2021.11/lib -L/home/oliver/miniconda3/envs/qiime2-2021.11/lib -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-rpath,/home/oliver/miniconda3/envs/qiime2-2021.11/lib -L/home/oliver/miniconda3/envs/qiime2-2021.11/lib -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,-rpath,/home/oliver/miniconda3/envs/qiime2-2021.11/lib -Wl,-rpath-link,/home/oliver/miniconda3/envs/qiime2-2021.11/lib -L/home/oliver/miniconda3/envs/qiime2-2021.11/lib -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /home/oliver/miniconda3/envs/qiime2-2021.11/include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /home/oliver/miniconda3/envs/qiime2-2021.11/include build/temp.linux-x86_64-3.8/bp/_bp.o -LBitArray/ -lbitarr -o build/lib.linux-x86_64-3.8/bp/_bp.cpython-38-x86_64-linux-gnu.so /home/oliver/miniconda3/envs/qiime2-2021.11/bin/../lib/gcc/x86_64-conda-linux-gnu/9.4.0/../../../../x86_64-conda-linux-gnu/bin/ld: cannot find -lbitarr collect2: error: ld returned 1 exit status error: command 'x86_64-conda_cos6-linux-gnu-gcc' failed with exit status 1 ---------------------------------------- ERROR: Command errored out with exit status 1: /home/oliver/miniconda3/envs/qiime2-2021.11/bin/python3.8 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-w97_8tx7/iow_64955545b9984426afb4cc99c1081b33/setup.py'"'"'; __file__='"'"'/tmp/pip-install-w97_8tx7/iow_64955545b9984426afb4cc99c1081b33/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-e5eqi_t5/install-record.txt --single-version-externally-managed --compile --install-headers /home/oliver/miniconda3/envs/qiime2-2021.11/include/python3.8/iow Check the logs for full command output. (qiime2-2021.11) xxxxxxx:~/share/2-12-21$ qiime dev refresh-cache QIIME is caching your current deployment for improved performance. This may take a few moments and should only happen once per deployment. (qiime2-2021.11) xxxxxxx:~/share/2-12-21$ qiime empress --help Error: QIIME 2 has no plugin/command named 'empress'.