DESCRIPTION

Package: mWISE
Type: Package
Title: Untargeted LC-MS data annotation
Version: 0.1.0
Authors@R: c(
  person(
    "Maria", "Barranco-Altirriba", email = "maria.barranco@upc.edu",
    role = c("aut", "cre")))
Description: mWISE provides a set of strategies to annotate untargeted LC-MS 
    data.
    Given a peak-intensity table as input, mWISE applies three main steps 
    aimed at i) matching  mass-to-charge ratio values to KEGG database, ii) clustering 
    and filtering the potential KEGG candidates and iii) building a final prioritized 
    list using diffusion in networks. 
    mWISE takes advantage of biological pathways knowledge to improve the
    annotation confidence level.
License: GPL-3
Encoding: UTF-8
biocViews: Software, Metabolomics, Annotation, MassSpectrometry, Network, Pathways,
    KEGG
RoxygenNote: 7.1.2
Depends: 
    R (>= 4.1)
VignetteBuilder: rmarkdown
Suggests: BiocStyle, knitr, rmarkdown
Imports: doParallel, GenomicRanges, dbscan, diffuStats, plyr, igraph, IRanges, 
    stats, utils