Error updating atom package

[kain88-de]

I'm trying to update the jupyter atom-notebook package. But the update fails with npm telling me that there is a likely error in runas package. I would like to add the stated support file but it doesn't exists in my tmp folder.

I'm running the current stable relase 1.3.3 on debian-testing using the official deb-package.
My version of nodejs is 4.2.4.

thinki ~ » apm upgrade jupyter-notebook
Package Updates Available (1)
└── jupyter-notebook 0.0.7 -> 0.0.8
Would you like to install these updates? (yes) yes
Installing [email protected] to /home/max/.atom/packages ✗
[email protected] install /tmp/apm-install-dir-116011-23793-1marnne/node_modules/jupyter-notebook/node_modules/pathwatcher/node_modules/runas
node-gyp rebuild
make: Entering directory '/tmp/apm-install-dir-116011-23793-1marnne/node_modules/jupyter-notebook/node_modules/pathwatcher/node_modules/runas/build'
CXX(target) Release/obj.target/runas/src/main.o
runas.target.mk:90: recipe for target 'Release/obj.target/runas/src/main.o' failed
make: Leaving directory '/tmp/apm-install-dir-116011-23793-1marnne/node_modules/jupyter-notebook/node_modules/pathwatcher/node_modules/runas/build'
[email protected] postinstall /tmp/apm-install-dir-116011-23793-1marnne/node_modules/jupyter-notebook/node_modules/jupyter-js-services
npm dedupe
[email protected] install /tmp/apm-install-dir-116011-23793-1marnne/node_modules/jupyter-notebook/node_modules/ws/node_modules/utf-8-validate
node-gyp rebuild
make: Entering directory '/tmp/apm-install-dir-116011-23793-1marnne/node_modules/jupyter-notebook/node_modules/ws/node_modules/utf-8-validate/build'
CXX(target) Release/obj.target/validation/src/validation.o
SOLINK_MODULE(target) Release/obj.target/validation.node
COPY Release/validation.node
make: Leaving directory '/tmp/apm-install-dir-116011-23793-1marnne/node_modules/jupyter-notebook/node_modules/ws/node_modules/utf-8-validate/build'
[email protected] install /tmp/apm-install-dir-116011-23793-1marnne/node_modules/jupyter-notebook/node_modules/ws/node_modules/bufferutil
node-gyp rebuild
make: Entering directory '/tmp/apm-install-dir-116011-23793-1marnne/node_modules/jupyter-notebook/node_modules/ws/node_modules/bufferutil/build'
CXX(target) Release/obj.target/bufferutil/src/bufferutil.o
SOLINK_MODULE(target) Release/obj.target/bufferutil.node
COPY Release/bufferutil.node
make: Leaving directory '/tmp/apm-install-dir-116011-23793-1marnne/node_modules/jupyter-notebook/node_modules/ws/node_modules/bufferutil/build'
../src/main.cc:1:17: fatal error: nan.h: No such file or directory
compilation terminated.
make: *** [Release/obj.target/runas/src/main.o] Error 1
gyp ERR! build error
gyp ERR! stack Error: make failed with exit code: 2
gyp ERR! stack at ChildProcess.onExit (/usr/share/atom/resources/app/apm/node_modules/npm/node_modules/node-gyp/lib/build.js:269:23)
gyp ERR! stack at ChildProcess.emit (events.js:98:17)
gyp ERR! stack at Process.ChildProcess._handle.onexit (child_process.js:820:12)
gyp ERR! System Linux 4.3.0-1-amd64
gyp ERR! command "node" "/usr/share/atom/resources/app/apm/node_modules/npm/node_modules/node-gyp/bin/node-gyp.js" "rebuild"
gyp ERR! cwd /tmp/apm-install-dir-116011-23793-1marnne/node_modules/jupyter-notebook/node_modules/pathwatcher/node_modules/runas
gyp ERR! node -v v0.10.40
gyp ERR! node-gyp -v v2.0.2
gyp ERR! not ok
npm ERR! Linux 4.3.0-1-amd64
npm ERR! argv "/usr/share/atom/resources/app/apm/bin/node" "/usr/share/atom/resources/app/apm/node_modules/npm/bin/npm-cli.js" "--globalconfig" "/home/max/.atom/.apm/.apmrc" "--userconfig" "/home/max/.atom/.apmrc" "install" "/tmp/d-116011-23793-sk2z78/package.tgz" "--target=0.34.5" "--arch=x64"
npm ERR! node v0.10.40
npm ERR! npm v2.13.3
npm ERR! code ELIFECYCLE
npm ERR! [email protected] install: node-gyp rebuild
npm ERR! Exit status 1
npm ERR!
npm ERR! Failed at the [email protected] install script 'node-gyp rebuild'.
npm ERR! This is most likely a problem with the runas package,
npm ERR! not with npm itself.
npm ERR! Tell the author that this fails on your system:
npm ERR! node-gyp rebuild
npm ERR! You can get their info via:
npm ERR! npm owner ls runas
npm ERR! There is likely additional logging output above.
npm ERR! Please include the following file with any support request:
npm ERR! /tmp/apm-install-dir-116011-23793-1marnne/npm-debug.log

[gnestor]

There is an issue with node-gyp and Python 3. Try explicitly setting the Python version PYTHON=python2 apm install.

[kain88-de]

I get the same error.

Also this is what apm tells me is installed.

thinki ~ » apm --version
apm 1.4.1
npm 2.13.3
node 0.10.40
python 2.7.11
git 2.6.4

Could it be that atom bundles it's own version of node? Because the node-package I have installed is much newer then what apm tells me about.

[gnestor]

apm does bundle it's own version of Node...

[sayingandparsing]

I'm having the same issue with runas during installation of an atom package. PYTHON=python2 apm install jupyter-notebook failed with the same error message. I'm using arch linux. Any suggestions?

[rornor]

I too have same problem

> apm --version
apm  1.6.0
npm  2.13.3
node 0.10.40
python 2.7.11
git 2.7.1.windows.2
visual studio 2010

Log:

> apm install jupyter-notebook
Installing jupyter-notebook to C:\Users\rornor\.atom\packages failed

> [email protected] install C:\Users\rornor\AppData\Local\Temp\apm-install-dir-116226-9220-1p7swt8\node_modules\jupyter-notebook\node_modules\pathwatcher\node_modules\runas
> node-gyp rebuild


C:\Users\rornor\AppData\Local\Temp\apm-install-dir-116226-9220-1p7swt8\node_modules\jupyter-notebook\node_modules\pathwatcher\node_modules\runas>if not defined npm_config_node_gyp (node "c:\Users\rornor\AppData\Local\atom\app-1.6.0\resources\app\apm\node_modules\npm\bin\node-gyp-bin\\..\..\node_modules\node-gyp\bin\node-gyp.js" rebuild )  else (node  rebuild )

> [email protected] install C:\Users\rornor\AppData\Local\Temp\apm-install-dir-116226-9220-1p7swt8\node_modules\jupyter-notebook\node_modules\ws\node_modules\bufferutil
> node-gyp rebuild


C:\Users\rornor\AppData\Local\Temp\apm-install-dir-116226-9220-1p7swt8\node_modules\jupyter-notebook\node_modules\ws\node_modules\bufferutil>if not defined npm_config_node_gyp (node "c:\Users\rornor\AppData\Local\atom\app-1.6.0\resources\app\apm\node_modules\npm\bin\node-gyp-bin\\..\..\node_modules\node-gyp\bin\node-gyp.js" rebuild )  else (node  rebuild )

> [email protected] install C:\Users\rornor\AppData\Local\Temp\apm-install-dir-116226-9220-1p7swt8\node_modules\jupyter-notebook\node_modules\ws\node_modules\utf-8-validate
> node-gyp rebuild


C:\Users\rornor\AppData\Local\Temp\apm-install-dir-116226-9220-1p7swt8\node_modules\jupyter-notebook\node_modules\ws\node_modules\utf-8-validate>if not defined npm_config_node_gyp (node "c:\Users\rornor\AppData\Local\atom\app-1.6.0\resources\app\apm\node_modules\npm\bin\node-gyp-bin\\..\..\node_modules\node-gyp\bin\node-gyp.js" rebuild )  else (node  rebuild )

npm WARN peerDependencies The peer dependency phosphor-disposable@^1.0.5 included from jupyter-js-services will no
npm WARN peerDependencies longer be automatically installed to fulfill the peerDependency
npm WARN peerDependencies in npm 3+. Your application will need to depend on it explicitly.
npm WARN peerDependencies The peer dependency phosphor-signaling@^1.2.0 included from jupyter-js-services will no
npm WARN peerDependencies longer be automatically installed to fulfill the peerDependency
npm WARN peerDependencies in npm 3+. Your application will need to depend on it explicitly.
gypgypnpm WARN optional dep failed, continuing [email protected]
npm WARN optional dep failed, continuing [email protected]
npm ERR! Windows_NT 6.1.7601
npm ERR! argv "c:\\Users\\rornor\\AppData\\Local\\atom\\app-1.6.0\\resources\\app\\apm\\bin\\node.exe" "c:\\Users\\rornor\\AppData\\Local\\atom\\app-1.6.0\\resources\\app\\apm\\node_modules\\npm\\bin\\npm-cli.js" "--globalconfig" "C:\\Users\\rornor\\.atom\\.apm\\.apmrc" "--userconfig" "C:\\Users\\rornor\\.atom\\.apmrc" "install" "C:\\Users\\rornor\\AppData\\Local\\Temp\\d-116226-9220-x3jmd2\\package.tgz" "--target=0.34.5" "--arch=ia32" "--msvs_version=2010"
npm ERR! node v0.10.40
npm ERR! npm  v2.13.3
npm ERR! code ELIFECYCLE

npm ERR! [email protected] install: `node-gyp rebuild`
npm ERR! Exit status 1
npm ERR!
npm ERR! Failed at the [email protected] install script 'node-gyp rebuild'.
npm ERR! This is most likely a problem with the runas package,
npm ERR! not with npm itself.
npm ERR! Tell the author that this fails on your system:
npm ERR!     node-gyp rebuild
npm ERR! You can get their info via:
npm ERR!     npm owner ls runas
npm ERR! There is likely additional logging output above.

Is there some workaround?

[rornor]

I managed to solve this while trying various approaches, which finally led to this: JustinTulloss/zeromq.node#500

[lee-dohm]

All repositories in the atom-archive organization are unmaintained and deprecated. Because of this, we are archiving this repository and closing all issues and pull requests. Thanks very much for your support and contributions!