Docker image does not build (Apple M1)

[val-ismaili]

On building a docker image on an Apple M1 machine with:
docker build -t "osmox" .

when executing this line in the dockerfile I get the error:

`× python setup.py egg_info did not run successfully.
#10 2.642   │ exit code: 1
#10 2.642   ╰─> [12 lines of output]
#10 2.642       Failed `CDLL(libgeos_c.so.1)`
#10 2.642       Failed `CDLL(libgeos_c.so)`
#10 2.642       Traceback (most recent call last):
#10 2.642         File "<string>", line 36, in <module>
#10 2.642         File "<pip-setuptools-caller>", line 34, in <module>
#10 2.642         File "/tmp/pip-install-w53lhwgs/shapely_248fa231557d464fa86b92b4ff842582/setup.py", line 74, in <module>
#10 2.642           from shapely._buildcfg import geos_version_string, geos_version, \
#10 2.642         File "/tmp/pip-install-w53lhwgs/shapely_248fa231557d464fa86b92b4ff842582/shapely/_buildcfg.py", line 167, in <module>
#10 2.642           fallbacks=['libgeos_c.so.1', 'libgeos_c.so'])
#10 2.642         File "/tmp/pip-install-w53lhwgs/shapely_248fa231557d464fa86b92b4ff842582/shapely/_buildcfg.py", line 161, in load_dll
#10 2.642           libname, fallbacks or []))
#10 2.642       OSError: Could not find library geos_c or load any of its variants ['libgeos_c.so.1', 'libgeos_c.so']
#10 2.642       [end of output]
#10 2.642   
#10 2.642   note: This error originates from a subprocess, and is likely not a problem with pip.
#10 2.643 error: metadata-generation-failed`

[val-ismaili]

Docker image will build if add the below to dockerfile:

apt-get -y install libgeos-dev &&  \
apt-get -y install libgdal-dev &&  \
apt-get -y install build-essential cmake libboost-dev libexpat1-dev zlib1g-dev libbz2-dev &&  \

However when running osmox in a container a shapely error occurs:

Loading config from '/mnt/new_d/example.json'.
Configured OSM tag keys: ['building', 'highway', 'public_transport']
Configured activities: ['education', 'home', 'medical', 'other', 'shop', 'transit', 'visit', 'work']
INFO:osmox.main: Filtering all objects found in /mnt/new_d/isle-of-man-latest.osm.pbf. This may take a long while.
ERROR:shapely.geos:ParseException: Invalid HEX char
Traceback (most recent call last):
  File "/usr/local/bin/osmox", line 33, in <module>
    sys.exit(load_entry_point('osmox', 'console_scripts', 'osmox')())
  File "/usr/local/lib/python3.7/site-packages/click/core.py", line 829, in __call__
    return self.main(*args, **kwargs)
  File "/usr/local/lib/python3.7/site-packages/click/core.py", line 782, in main
    rv = self.invoke(ctx)
  File "/usr/local/lib/python3.7/site-packages/click/core.py", line 1259, in invoke
    return _process_result(sub_ctx.command.invoke(sub_ctx))
  File "/usr/local/lib/python3.7/site-packages/click/core.py", line 1066, in invoke
    return ctx.invoke(self.callback, **ctx.params)
  File "/usr/local/lib/python3.7/site-packages/click/core.py", line 610, in invoke
    return callback(*args, **kwargs)
  File "/osmox/main.py", line 71, in run
    handler.apply_file(str(input_path), locations=True, idx='flex_mem')
  File "/osmox/build.py", line 287, in node
    self.add_point(idx=n.id, activity_tags=activity_tags, geom=self.fab_point(n))
  File "/osmox/build.py", line 268, in fab_point
    return wkblib.loads(wkb, hex=True)
  File "/usr/local/lib/python3.7/site-packages/shapely/wkb.py", line 21, in loads
    return reader.read_hex(data)
  File "/usr/local/lib/python3.7/site-packages/shapely/geos.py", line 443, in read_hex
    "Could not create geometry because of errors "
shapely.errors.WKBReadingError: Could not create geometry because of errors while reading input.

[brynpickering]

With the new mamba install method, this has a workaround on Apple Silicon devices: arup-group/genet#221