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setup.py
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setup.py
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#!/usr/bin/env python
# -----------------------------------------------------------------------------
# This work is licensed under the Creative Commons
# Attribution-NonCommercial-ShareAlike 4.0 International License. To view a
# copy of this license, visit
# http://creativecommons.org/licenses/by-nc-sa/4.0/.
# -----------------------------------------------------------------------------
__version__ = '0.1.4.dev0'
from setuptools import find_packages, setup
import sys
# Check that Python version is 3, since build will
# currently complete in Python 2, but the notebooks
# won't work.
python_version = sys.version_info.major
if python_version != 3:
sys.exit("IAB can only be used with Python 3. "
"You are currently running Python %d." % python_version)
classes = """
Development Status :: 1 - Planning
Framework :: IPython
Intended Audience :: Developers
Intended Audience :: Education
Intended Audience :: Science/Research
Natural Language :: English
Operating System :: MacOS :: MacOS X
Operating System :: POSIX
Operating System :: Unix
Programming Language :: Python
Programming Language :: Python :: 3.5
Topic :: Scientific/Engineering
Topic :: Scientific/Engineering :: Bio-Informatics
"""
classifiers = [s.strip() for s in classes.split('\n') if s]
description = ("An Introduction To Applied Bioinformatics (IAB): "
"Interactive lessions in bioinformatics.")
setup(name='An-Introduction-To-Applied-Bioinformatics',
version=__version__,
license='CC BY-NC-SA 4.0',
description=description,
long_description=description,
author='Greg Caporaso',
author_email='[email protected]',
maintainer='Greg Caporaso',
maintainer_email='[email protected]',
url='http://readIAB.org',
packages=find_packages(),
install_requires=['scikit-bio >= 0.5.5, < 0.6.0',
'jupyter', 'seaborn',
'qiime-default-reference >= 0.1.3, < 0.2.0',
'pandas',
'markdown2 >= 2.3.0',
'tabulate',
'networkx == 2.3.0',
'ete3',
'ipymd >= 0.1.2'],
classifiers=classifiers)