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PeakML.GapFiller Error #10

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chaesh90 opened this issue Oct 4, 2023 · 2 comments
Open

PeakML.GapFiller Error #10

chaesh90 opened this issue Oct 4, 2023 · 2 comments

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@chaesh90
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chaesh90 commented Oct 4, 2023

Hello again.

I'm still running some test samples to set mzmatch and mzmatch-ISO for my lab and after running the code below,
image
this occured.
image

The PeakML.BlankFilter function worked fine in the same script so I don't know what is going on..

Thanks.

@andzajan
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andzajan commented Oct 4, 2023

Hi, my first guess is that you can't have ppm and rt parameters as 0, they should be at least 1 or more.
If the error is still there, I will need some small reproducible example of data from you to investigate it.

@chaesh90
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chaesh90 commented Oct 5, 2023

I have changed the code to the following image and it still ends up with the same error message.
image

I've attatched the "final_combined_blank_filtered" file.
final_combined_blank_filtered.zip

I've also created the dropbox link that has all the files and R code.
https://www.dropbox.com/scl/fo/kbblz8fdtmo30dd85mpc0/h?rlkey=mx0m1bl6d0zqz1ymzuirc1gg8&dl=0

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