Changelog

0.1.3 (2023-02-10)

Bug Fixes

build workflow for comment bot (#186) (ebcf6cd)
comment bot in build pipeline (#184) (b3fb839)

Documentation

warn about pysam pip issue (#187) (bda0157)

0.1.2 (2023-02-02)

Bug Fixes

add poetry readme to fix long_description when publishing to pypi (#177) (4050251)
checkout in comment bot workflow for CD pipeline (#181) (9782d3d)
checkout ref in comment bot from CD pipeline (#182) (e3b92f6)
comment bot in CD pipeline (#180) (a2f66bd)
indentation in checkout build (#183) (de431ab)

0.1.1 (2023-02-02)

Documentation

add dependency to conda env build (#175) (6626049)

0.1.0 (2023-01-31)

Features

a new --no-normalize parameter for simphenotype (#156) (24a0867)
add --seed to simphenotype (#162) (9f7890a)
change default verbosity to INFO (#157) (18ff090)
github actions for publishing (#141) (5cf6f29)
Significantly decreased runtime of simgenotype (#163) (de011d0)
updated .vcf.gz output in simgenotype (#150) (f61f613)
Updated simgenotype to allow only breakpoint generation (#167) (c0c3c97)

Bug Fixes

Added an additional test file containing only autosome centromeres (#168) (ca220e7)
Added utilization of logging class to karyogram and simgenotype (#159) (bcf778a)
case where genotypes are all the same but heritability is specified in simphenotype (#145) (063b411)
Fixed logic error in simgenotype and docs errors (#172) (18dd27f)
issue where breakpoints weren't outputting (#144) (ff90bff)
logging so that it doesn't affect the root logger (#154) (c1dc1ef)
pin numpy to ensure a recent version of numpy (#151) (7c84a45)
Update maps.rst (#170) (8ace893)

Documentation

better showcase example files and their locations in simgenotype (#166) (6995407)
updates for v0.1.0 (#171) (714142f)