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0ntologies diagnostics (January 2022) - Ontologies with RDF data, without ANNOTATOR status #199

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Tracked by #192
syphax-bouazzouni opened this issue Feb 4, 2022 · 2 comments
Closed
2 tasks done
Tracked by #192
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content Issues related to the content of AgroPortal

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@syphax-bouazzouni
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syphax-bouazzouni commented Feb 4, 2022

Ontologies with RDF data, without ANNOTATOR status:

http://bioportal.bioontology.org/ontologies/CO_345
        flat=
        submissionId=57
        hasOntologyLanguage=OWL
        metrics=METRICS_MISSING
        submissionStatus=RDF,OBSOLETE,INDEXED_PROPERTIES,METRICS,RDF_LABELS,UPLOADED,DIFF,INDEXED,INDEX_ERROR:missing,ANNOTATIONS_MISSING_STATUS,ANNOTATIONS_AVAILABLE

http://bioportal.bioontology.org/ontologies/CO_365
        flat=
        submissionId=51
        hasOntologyLanguage=OWL
        metrics=averageChildCount:11,classes:443,classesWithMoreThan25Children:3,classesWithNoDefinition:268,classesWithOneChild:2,individuals:0,maxChildCount:94,maxDepth:3,properties:3
        submissionStatus=RDF,OBSOLETE,INDEXED_PROPERTIES,METRICS,RDF_LABELS,UPLOADED,DIFF,INDEXED,INDEX_ERROR:missing,ANNOTATIONS_MISSING_STATUS,ANNOTATIONS_AVAILABLE

Progression

  • CO_345 annotations missing
  • CO_365 annotations missing
@syphax-bouazzouni syphax-bouazzouni added the content Issues related to the content of AgroPortal label Feb 4, 2022
@syphax-bouazzouni
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Done for 345 :

D, [2022-02-04T18:46:18.443085 #4410] DEBUG -- : ["Completed processing of http://data.bioontology.org/ontologies/CO_345/submissions/57 in 865.16s"]
I, [2022-02-04T18:46:18.463138 #4410]  INFO -- : ["Running ontologies report for ontologies CO_345...\n"]
I, [2022-02-04T18:46:18.463240 #4410]  INFO -- : ["Processing report for CO_345 - 1 of 1 ontologies."]
I, [2022-02-04T18:46:21.217926 #4410]  INFO -- : ["Finished report for CO_345 in 2.754529332742095 sec."]
I, [2022-02-04T18:46:21.225807 #4410]  INFO -- : ["Finished updating report for ontologies CO_345. Wrote report data to /srv/ontoportal/data/reports/ontologies_report.json.\n"]

@syphax-bouazzouni
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Done for 365 :

I, [2022-02-11T08:12:27.715669 #1834]  INFO -- : Lemmatized dictionary generated successfully!
D, [2022-02-11T08:12:27.724294 #1834] DEBUG -- : ["Completed processing of http://data.bioontology.org/ontologies/CO_365/submissions/51 in 812.03s"]
I, [2022-02-11T08:12:27.735203 #1834]  INFO -- : ["Running ontologies report for ontologies CO_365...\n"]
I, [2022-02-11T08:12:27.735299 #1834]  INFO -- : ["Processing report for CO_365 - 1 of 1 ontologies."]
I, [2022-02-11T08:12:29.762789 #1834]  INFO -- : ["Finished report for CO_365 in 2.027307969998219 sec."]
I, [2022-02-11T08:12:29.776721 #1834]  INFO -- : ["Finished updating report for ontologies CO_365. Wrote report data to /srv/ontoportal/data/reports/ontologies_report.json.\n"]
 

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