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Update VT versions manually #140

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jonquet opened this issue May 1, 2020 · 9 comments
Closed

Update VT versions manually #140

jonquet opened this issue May 1, 2020 · 9 comments
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@jonquet
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jonquet commented May 1, 2020

We are several verison behind for VT because of PURL issue described here:
AnimalGenome/vertebrate-trait-ontology#3

We need to load each version manually from
https://github.com/AnimalGenome/vertebrate-trait-ontology
from 7.3 to 10.3

@jonquet jonquet transferred this issue from another repository Oct 27, 2020
@syphax-bouazzouni syphax-bouazzouni added the content Issues related to the content of AgroPortal label Oct 15, 2021
@syphax-bouazzouni
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it seems that it's have done http://agroportal.lirmm.fr/ontologies/VT, but it still needs to clean duplicated versions (e.g VT has 13 times the same version of 11.4)

@syphax-bouazzouni
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@jonquet any news about this?

@jonquet
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jonquet commented Oct 25, 2022

VT developper contacted by email.

@syphax-bouazzouni
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@jonquet a year after, any news?

@jonquet
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jonquet commented Dec 14, 2023

I have updated the latest version info.
We need to curate the rest (so issue shall remain open). Can't be done right now (not working in AgroPortal 2.7).

Follow up with :
AnimalGenome/vertebrate-trait-ontology#10
and
AnimalGenome/vertebrate-trait-ontology#9

@syphax-bouazzouni
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I have updated the latest version info. We need to curate the rest (so issue shall remain open). Can't be done right now (not working in AgroPortal 2.7).

Follow up with : AnimalGenome/vertebrate-trait-ontology#10 and AnimalGenome/vertebrate-trait-ontology#9

@jonquet is it still not working in AgroProportal 2.8

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jonquet commented Jun 6, 2024

Seems to work now. I have removed submisison number 17. Its a bit long but did not genertaed error.

For the rest of the cleaning I have mentionned to @zhiliangme here: AnimalGenome/vertebrate-trait-ontology#11

@jonquet
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jonquet commented Jun 6, 2024

Confirmed .. ok to removd duplicate and keep on ly the first ones of the series.
Will do with eradicate script

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jonquet commented Jun 7, 2024

Close as done.

@jonquet jonquet closed this as completed Jun 7, 2024
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