#Scripts used in monotremes genome project

##MHC_plot and synteny_plot
scripts used for most synteny plots

##gametolog_tree
scripts used in gametologues alignment and tree construction

##gene_comparison
scripts used in gene set comparison

##interaction_map
scripts used in Hi-C interaction map extraction and visualization

##rearrangement_count
scripts used to count the number of rearrangement events inferred by GRIMM

##tissue_specificity
script to calculate tissue specific index TAU