From 5f404e0c21585cf043c721a9dbf23eef1fa29f63 Mon Sep 17 00:00:00 2001 From: Yang Xie Date: Fri, 21 Jun 2024 13:56:22 -0700 Subject: [PATCH] 240621: add project details --- .DS_Store | Bin 10244 -> 10244 bytes .__config.yml | Bin 4096 -> 4096 bytes .__includes | Bin 0 -> 4096 bytes _config.yml | 4 ++-- _includes/._figure.liquid | Bin 4096 -> 4096 bytes _includes/._projects.liquid | Bin 4096 -> 4096 bytes _includes/projects.liquid | 2 +- _layouts/._about.liquid | Bin 4096 -> 4096 bytes _layouts/about.liquid | 5 +++-- _pages/._about.md | Bin 0 -> 4096 bytes _pages/._projects.md | Bin 4096 -> 4096 bytes _pages/about.md | 10 ++++------ _pages/projects.md | 11 +++++++++-- _projects/1_project.md | 3 ++- _projects/2_project.md | 3 ++- _sass/.DS_Store | Bin 0 -> 6148 bytes _sass/._.DS_Store | Bin 0 -> 4096 bytes _sass/.__base.scss | Bin 0 -> 4096 bytes _sass/.__layout.scss | Bin 0 -> 4096 bytes _sass/_base.scss | 2 +- assets/.DS_Store | Bin 6148 -> 6148 bytes assets/css/._main.scss | Bin 4096 -> 4096 bytes 22 files changed, 24 insertions(+), 16 deletions(-) create mode 100644 .__includes create mode 100644 _pages/._about.md create mode 100644 _sass/.DS_Store create mode 100644 _sass/._.DS_Store create mode 100644 _sass/.__base.scss create mode 100644 _sass/.__layout.scss diff --git a/.DS_Store b/.DS_Store index b9df7a29f60a9a0d4aab574a03cd76799d7849b8..486a3b3b183cb597351de49e5dd9d09ddf501387 100644 GIT binary patch delta 157 zcmZn(XbG6$&nUJrU^hRb*yIlaa+|dTeltzh6xz4>k+2#gm~m88i*fP?5jNI*hGK@2 z$udHxdD$4^844J{e1_u955#yFIaz^1#SDoI#UKSpyxZcMU{elDB(rX2SNO#;SyAZN MWd;zu?k GYX<<;mnnPz diff --git a/.__config.yml b/.__config.yml index bb5bf2f8797ebcf058f88e1952ce82a9f7d4f33d..318cc60880b04f45d8328265a5a8983acffa93e1 100644 GIT binary patch delta 31 lcmZorXi%82fM>~z(liDTxVc7q<3?k?i3eCWKjD*M1OT|G3r_$5 delta 31 lcmZorXi%82fG6#8X&M6%_y)vjZQN+gH}L@L<|lkIi~y-^3UL4c diff --git a/.__includes b/.__includes new file mode 100644 index 0000000000000000000000000000000000000000..7c728e6a4bf1a6a62fef0ab545111b2ab6f63e38 GIT binary patch literal 4096 zcmZQz6=P>$Vqox1Ojhs@R)|o50+1L3ClDJkFz{^v(m+1nBL)UWIUt(=a103vVqjov zgXmzG0#xpSriBs6hl=wj=jZAr78K;9>g6UT=Kv+x7?hR5!%lqh-@oVAA8|LMYiH1O zk8(#tU^E0qLtr!nMnhmU1V%$(Gz3ONU^E0qLtr!nMneEg2!J}9APfd_AsLy)3Pq{K z`K3k4sS0WNMcE3Oc_pcNC7Jnoi8(oy3OT81B??J7iFw(;zA#kRkfu=m5BG`;gWUiB E0N?B@Q2+n{ literal 0 HcmV?d00001 diff --git a/_config.yml b/_config.yml index 3f5b055..21c4069 100644 --- a/_config.yml +++ b/_config.yml @@ -48,8 +48,8 @@ rss_icon: false navbar_fixed: true footer_fixed: true -search_enabled: true -socials_in_search: true +search_enabled: false +socials_in_search: false # Dimensions max_width: 930px diff --git a/_includes/._figure.liquid b/_includes/._figure.liquid index 3143f6247e2b12aff574fa3613d11fd1bc154bf0..153e19d08df42af9ef3a64db3f744c22c2f495a9 100644 GIT binary patch delta 31 lcmZorXi%82famv((liDjNH7SJ-?-73Z{h*g%}@Ab7y-5M3g-X- delta 31 lcmZorXi%82fX8`4Ng4wXq&P*&Zro_hH}L@L<|lkIi~ygx3IPBB diff --git a/_includes/._projects.liquid b/_includes/._projects.liquid index 32b55659da640bcd473335af72f68f0b7e7517d8..0a6f1666beaa84f8155238b30a91501806e88f4e 100644 GIT binary patch delta 167 zcmZorXi%6C<;FIJfr0N40|UbYAWjEjWWWsMJOE;T1_tru{9L`nf`Xh>y^z$364$)s z{FKZ*sD}3wYgBxJ>iz?<2T(aeZEj+64ucj$X-S%{g|(rviIJhXrG<(2h0-*jQU+7; 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{% if site.enable_project_categories and page.display_categories %} diff --git a/_projects/1_project.md b/_projects/1_project.md index e4ca26e..b827bd8 100644 --- a/_projects/1_project.md +++ b/_projects/1_project.md @@ -16,7 +16,8 @@ Understanding the types of modifications present on genes or regulatory elements Compared with previous methods, Droplet Paired-Tag has higher signal specificty and is way easier to do. In our manuscript, we have used this method to resolve the repressive elements in adult mouse brain, which is difficult to do before. [Other study](https://www.nature.com/articles/s41586-023-06819-6) has utilized Droplet Paired-Tag to characrize enhancers in human brain, and concluded that epi-conserved regulatory elements across multiple species are more likely to be active enhancers. -For more details, please refer to our [manuscript](https://www.nature.com/articles/s41594-023-01060-1) +For more details, please refer to our [manuscript](https://www.nature.com/articles/s41594-023-01060-1). +
diff --git a/_projects/2_project.md b/_projects/2_project.md index 08f66b9..e61e7a6 100644 --- a/_projects/2_project.md +++ b/_projects/2_project.md @@ -14,7 +14,8 @@ It is unclear how the very long DNA strand (around 2 meters) from a human cell i We combined Hi-C with commercial microfluidics to allow efficient measurement of chromatin conformation in individual cells, which we named Droplet Hi-C. This technique not only enables the analysis of cell type-specific chromatin structures in heterogeneous tissues, such as the mouse brain, but also has been pivotal in detecting copy number or structural variations, including extrachromosomal DNA (ecDNA), in brain cancer cells or glioblastoma. Furthermore, we extended Droplet Hi-C to a multiomics approach (Paired Hi-C), facilitating the simultaneous analysis of gene expression and chromatin conformation in the same cell, thereby linking ecDNA copy number with gene expression variations in brain cancer cells under drug treatment. -For more details, please refer to our [manuscript](https://www.biorxiv.org/content/10.1101/2024.04.18.590148v1) +For more details, please refer to our [manuscript](https://www.biorxiv.org/content/10.1101/2024.04.18.590148v1). +
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