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@WIS-MICC-CellObservatory

MICC Cell Observatory at Weizmann Institute of Science

Imaging and Image Analysis Facility at the Weizmann Institute of Science

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  1. Crypts_SpatialOrganization Crypts_SpatialOrganization Public

    Segment colon crypts from z-projection of SHG images of fibrillar collagen and Quantify fibrosis by analyzing the spatial organization of the crypts.

    ImageJ Macro 2 1

  2. BacteriaCellWallThickness BacteriaCellWallThickness Public

    ImageJ Macro 2

  3. OsteoclastsWorkflow-Tutorial OsteoclastsWorkflow-Tutorial Public

    Incorporating Machine learning tools into Image Analysis workflows using Fiji, Ilastik and StarDist

    ImageJ Macro 2

  4. Intestinal_Barrier_Function Intestinal_Barrier_Function Public

    Morphological analysis of Intestinal Barrier Function based on images of Epithelial Tight Junction (TJ)

    1

  5. Myelin_Profiles_PNS Myelin_Profiles_PNS Public

    Segmentation and quantification of mature isolated myelin rings from serialEM of PNS

    1

  6. Utils Utils Public

    Utility ImageJ macros and other scripts

    ImageJ Macro 1

Repositories

Showing 10 of 21 repositories
  • Mitochondria-structure-and-Lipid-droplets-clustering Public

    Identify the structure of the mitochondria and the lipid droplets clustering in cells under starvation

    WIS-MICC-CellObservatory/Mitochondria-structure-and-Lipid-droplets-clustering’s past year of commit activity
    ImageJ Macro 0 MIT 0 0 0 Updated Nov 26, 2024
  • WIS-MICC-CellObservatory/compensatory-proliferation-in-the-Drosophila-wing-’s past year of commit activity
    ImageJ Macro 0 MIT 0 0 0 Updated Sep 8, 2024
  • Utils Public

    Utility ImageJ macros and other scripts

    WIS-MICC-CellObservatory/Utils’s past year of commit activity
    ImageJ Macro 1 MIT 0 0 0 Updated Jul 28, 2024
  • WIS-MICC-CellObservatory/BrainyCrystals’s past year of commit activity
    ImageJ Macro 0 MIT 0 0 0 Updated Jun 30, 2024
  • WIS-MICC-CellObservatory/BacteriaCellWallThickness’s past year of commit activity
    ImageJ Macro 2 MIT 0 0 0 Updated Jun 30, 2024
  • WIS-MICC-CellObservatory/SemiManual_Myelin_Profiles’s past year of commit activity
    0 MIT 0 0 0 Updated Jun 30, 2024
  • FiberThickness Public

    Measure thickness of horizontal fiber

    WIS-MICC-CellObservatory/FiberThickness’s past year of commit activity
    ImageJ Macro 0 MIT 0 0 0 Updated Jun 30, 2024
  • PME_Kinetics Public

    Evaluating paternal mitochondrial elimination kinetics in Drosophila embryos

    WIS-MICC-CellObservatory/PME_Kinetics’s past year of commit activity
    ImageJ Macro 0 MIT 0 0 0 Updated Jun 3, 2024
  • OsteoclastsWorkflow-Tutorial Public

    Incorporating Machine learning tools into Image Analysis workflows using Fiji, Ilastik and StarDist

    WIS-MICC-CellObservatory/OsteoclastsWorkflow-Tutorial’s past year of commit activity
    ImageJ Macro 2 MIT 0 0 0 Updated May 22, 2024
  • WIS-MICC-CellObservatory/QuPathTutorial’s past year of commit activity
    Groovy 1 MIT 0 0 0 Updated May 22, 2024

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