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Error in pca$x[, 1:npc] : subscript out of bounds #26

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xuyungang opened this issue Jun 27, 2019 · 0 comments
Open

Error in pca$x[, 1:npc] : subscript out of bounds #26

xuyungang opened this issue Jun 27, 2019 · 0 comments

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@xuyungang
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Hi,
I got the following error when running the imputation on a dataset. Could you please advise what's the reason for this error? Thanks.

[1] "reading in raw count matrix ..."
[1] "number of genes in raw count matrix 180253"
[1] "number of cells in raw count matrix 60"
[1] "reading finished!"
[1] "imputation starts ..."
[1] "searching candidate neighbors ... "
[1] "calculating cell distances ..."
Error in pca$x[, 1:npc] : subscript out of bounds
Calls: scimpute ... imputation_wlabel_model8 -> find_neighbors -> lapply -> FUN -> t
Execution halted

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