dax v2.2.1

Fix bug with upload threads

dax v2.2.0

-Add support for pet scans inputs
-Add option to set results dir when running dax upload
-Fix bug in XnatUtils
-Add URL encoding for SLURM script
-Switch htmlparser for python 3.9 compatibility

dax v2.1.0

*Xnatdownload: new "rename" option to put scan ID in filenames
*documentation updates
*fix for readthedocs to build "main" branch instead of "master"
*fix bugs related to first installing and setting up

dax v2.0.0

The major change in this version is the complete removal of dax_settings.ini. Most settings are now in the yaml settings file. These settings are written by dax manager or can be manually typed. Also, credentials are now only read from ~/.netrc for XNAT and email servers.

Other changes include:
*fix issue #303, dax manager override error
*fix issue #291, logic issue in XnatUtils.has_resource
*fix issue #284, bug in processor parser
*fix issue #280, missing outlog on upload
*fix issue #299, bug in upload one sub-directory
*fix issue #283, all settings in redcap
*fix issue #289 and #256, dax manager will now re-run project automatically whenever the yaml changes to effectively rebuild whenever redcap changes
*support "session" argument in dax launch (internal bug report)
*handle spaces in file paths for Xnatupload (internal bug report)
*finish moving settings to redcap and get rid of dax_settings.ini and dax_templates, except for job_template
*documentation improvements
*new mode option in instances redcap to allow "upload only"

dax v1.5.0

Changes in this version:
-randomly sort project order when launching new jobs
-handle instance disabled in REDCap
-improved error message for pyxnat db errors
-handle errors in redcap settings
-improved BIDS support
-documentation updates
-move templates to separate repo

dax v1.4.1

-Add dependency for nibabel
-Add requirement for python 3

dax v1.4.0

-New features to support BIDS format (See BIDSMapping and Xnatdownload tools)
-New feature to specify an account in the job template
-Bugfix for Xnatdownload
-More error checking in dax manager
-Remove readline dependency
-Documentation updates

dax v1.3.0

-Improved dax manager that now collects any errors and emails them.
-Bug fixes for dax setup, Xnatdemographic
-Improved job template

dax v1.2.0

-Implements override of fmatch resource in a project.
-Bugfix for dax manager to not run any builds if max has been reached
-Bugfix for Xnatcheck

dax v1.1.0

New features and bug fixes:
-Implements uploading of build logs for each image session.
-Adds error checking of each copy command in job template.
-Several updates to docs.
-Updates jar for genprocdata XNAT plugin.
-Fixes fs6 upload/download tools.
-Fixes garbling of build logs when run via dax manager.
-More settings in redcap for dax manager.