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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
S3method(get_stability_measures,replication_ssfind_result)
S3method(get_stability_measures,temporal_ssfind_result)
export(add_strain_var)
export(bushplus_dynamic_model)
export(event_definition_1)
export(event_definition_2)
export(event_definition_symmetric)
export(get_final_states_a_N)
export(get_hysteresis_max)
export(get_hysteresis_min)
export(get_hysteresis_range)
export(get_hysteresis_total)
export(get_nonlinearity)
export(get_ssbyaN_parameter)
export(get_stability_measures)
export(get_stability_measures_replication_ssfind_result)
export(get_stability_measures_temporal_ssfind_result)
export(get_symmetry_measurements)
export(growth1)
export(growth2)
export(inhibition)
export(new_CB_strain_parameter)
export(new_PB_strain_parameter)
export(new_SB_strain_parameter)
export(new_initial_state)
export(new_replication_ssfind_parameter)
export(new_replication_ssfind_results)
export(new_runsim_parameter)
export(new_runsim_results)
export(new_strain_parameter)
export(new_temporal_ssfind_results)
export(plot_dynamics)
export(plot_dynamics_symmetric)
export(plot_symmetry_measures)
export(plot_temporal_ss)
export(plot_trajectory_symmetry)
export(plot_trajectory_symmetry_compact)
export(run_replication_ssfind)
export(run_simulation)
export(run_simulation_symmetric)
export(run_temporal_ssfind)
export(run_temporal_ssfind_experiment)
export(run_temporal_ssfind_symmetric)
export(set_diffusivities)
export(set_temporal_ssfind_initial_state)
export(symmetric_bushplus_dynamic_model)
import(patchwork)
importFrom(DescTools,AUC)
importFrom(deSolve,ode)
importFrom(dplyr,across)
importFrom(dplyr,all_of)
importFrom(dplyr,case_when)
importFrom(dplyr,collect)
importFrom(dplyr,filter)
importFrom(dplyr,mutate)
importFrom(dplyr,pull)
importFrom(dplyr,recode)
importFrom(dplyr,rename)
importFrom(dplyr,row_number)
importFrom(dplyr,rowwise)
importFrom(dplyr,select)
importFrom(dplyr,slice)
importFrom(dplyr,starts_with)
importFrom(dplyr,summarise)
importFrom(ggplot2,aes)
importFrom(ggplot2,arrow)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_path)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_ribbon)
importFrom(ggplot2,geom_segment)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,guide_legend)
importFrom(ggplot2,guides)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_colour_manual)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,sec_axis)
importFrom(ggplot2,unit)
importFrom(ggplot2,xlab)
importFrom(ggplot2,ylab)
importFrom(ggplot2,ylim)
importFrom(ggpubr,ggarrange)
importFrom(grDevices,colorRampPalette)
importFrom(magrittr,"%>%")
importFrom(multidplyr,cluster_library)
importFrom(multidplyr,new_cluster)
importFrom(multidplyr,partition)
importFrom(stats,approx)
importFrom(stats,approxfun)
importFrom(stats,lm)
importFrom(stats,median)
importFrom(stats,na.omit)
importFrom(stats,predict)
importFrom(stringr,str_detect)
importFrom(tidyr,gather)
importFrom(tidyr,spread)