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Prokka Output Partially Renamed when Zipped #18

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connercopeland opened this issue Dec 1, 2023 · 0 comments
Open

Prokka Output Partially Renamed when Zipped #18

connercopeland opened this issue Dec 1, 2023 · 0 comments

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@connercopeland
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Prokka is very particular about sequence identifiers, and renames things it doesn't like. We use a Python script to rename sequences to their original identifiers, but this doesn't work if Prokka output is zipped- in that case, only GFF files have their identifiers reverted to the original
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