From 81eb9935713e00a663bf280d46ed94942222ebda Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Rok=20Ro=C5=A1kar?= Date: Thu, 9 Feb 2023 11:07:45 +0100 Subject: [PATCH] chore: revert directory renaming (#164) --- {R => R-minimal}/.dockerignore | 0 {R => R-minimal}/.gitignore | 0 {R => R-minimal}/.gitlab-ci.yml | 0 {R => R-minimal}/.renku/renku.ini | 0 {R => R-minimal}/.renkulfsignore | 0 {R => R-minimal}/Dockerfile | 0 {R => R-minimal}/README.md | 0 {R => R-minimal}/data/.gitkeep | 0 {R => R-minimal}/environment.yml | 0 {R => R-minimal}/install.R | 0 {R => R-minimal}/notebooks/.gitkeep | 0 {R => R-minimal}/requirements.txt | 0 {R => R-minimal}/workflows/my-workflow.yaml | 0 .../{{ __sanitized_project_name__ }}.Rproj | 0 {bioc => bioc-minimal}/.dockerignore | 0 {bioc => bioc-minimal}/.gitignore | 0 {bioc => bioc-minimal}/.gitlab-ci.yml | 0 {bioc => bioc-minimal}/.renku/renku.ini | 0 {bioc => bioc-minimal}/.renkulfsignore | 0 {bioc => bioc-minimal}/Dockerfile | 0 {bioc => bioc-minimal}/README.md | 0 {bioc => bioc-minimal}/data/.gitkeep | 0 {bioc => bioc-minimal}/environment.yml | 0 {bioc => bioc-minimal}/install.R | 0 {bioc => bioc-minimal}/notebooks/.gitkeep | 0 {bioc => bioc-minimal}/requirements.txt | 0 {bioc => bioc-minimal}/workflows/my-workflow.yaml | 0 .../{{ __sanitized_project_name__ }}.Rproj | 0 {julia => julia-minimal}/.dockerignore | 0 {julia => julia-minimal}/.gitignore | 0 {julia => julia-minimal}/.gitlab-ci.yml | 0 {julia => julia-minimal}/.renku/renku.ini | 0 {julia => julia-minimal}/.renkulfsignore | 0 {julia => julia-minimal}/Dockerfile | 0 {julia => julia-minimal}/Manifest.toml | 0 {julia => julia-minimal}/Project.toml | 0 {julia => julia-minimal}/README.md | 0 {julia => julia-minimal}/data/.gitkeep | 0 {julia => julia-minimal}/environment.yml | 0 {julia => julia-minimal}/notebooks/.gitkeep | 0 {julia => julia-minimal}/requirements.txt | 0 {julia => julia-minimal}/workflows/my-workflow.yaml | 0 manifest.yaml | 10 +++++----- {python => python-minimal}/.dockerignore | 0 {python => python-minimal}/.gitignore | 0 {python => python-minimal}/.gitlab-ci.yml | 0 {python => python-minimal}/.renku/renku.ini | 0 {python => python-minimal}/.renkulfsignore | 0 {python => python-minimal}/Dockerfile | 0 {python => python-minimal}/README.md | 0 {python => python-minimal}/data/.gitkeep | 0 {python => python-minimal}/environment.yml | 0 {python => python-minimal}/notebooks/.gitkeep | 0 {python => python-minimal}/requirements.txt | 0 {python => python-minimal}/workflows/my-workflow.yaml | 0 55 files changed, 5 insertions(+), 5 deletions(-) rename {R => R-minimal}/.dockerignore (100%) rename {R => R-minimal}/.gitignore (100%) rename {R => R-minimal}/.gitlab-ci.yml (100%) rename {R => R-minimal}/.renku/renku.ini (100%) rename {R => R-minimal}/.renkulfsignore (100%) rename {R => R-minimal}/Dockerfile (100%) rename {R => R-minimal}/README.md (100%) rename {R => R-minimal}/data/.gitkeep (100%) rename {R => R-minimal}/environment.yml (100%) rename {R => R-minimal}/install.R (100%) rename {R => R-minimal}/notebooks/.gitkeep (100%) rename {R => R-minimal}/requirements.txt (100%) rename {R => R-minimal}/workflows/my-workflow.yaml (100%) rename {R => R-minimal}/{{ __sanitized_project_name__ }}.Rproj (100%) rename {bioc => bioc-minimal}/.dockerignore (100%) rename {bioc => bioc-minimal}/.gitignore (100%) rename {bioc => bioc-minimal}/.gitlab-ci.yml (100%) rename {bioc => bioc-minimal}/.renku/renku.ini (100%) rename {bioc => bioc-minimal}/.renkulfsignore (100%) rename {bioc => bioc-minimal}/Dockerfile (100%) rename {bioc => bioc-minimal}/README.md (100%) rename {bioc => bioc-minimal}/data/.gitkeep (100%) rename {bioc => bioc-minimal}/environment.yml (100%) rename {bioc => bioc-minimal}/install.R (100%) rename {bioc => bioc-minimal}/notebooks/.gitkeep (100%) rename {bioc => bioc-minimal}/requirements.txt (100%) rename {bioc => bioc-minimal}/workflows/my-workflow.yaml (100%) rename {bioc => bioc-minimal}/{{ __sanitized_project_name__ }}.Rproj (100%) rename {julia => julia-minimal}/.dockerignore (100%) rename {julia => julia-minimal}/.gitignore (100%) rename {julia => julia-minimal}/.gitlab-ci.yml (100%) rename {julia => julia-minimal}/.renku/renku.ini (100%) rename {julia => julia-minimal}/.renkulfsignore (100%) rename {julia => julia-minimal}/Dockerfile (100%) rename {julia => julia-minimal}/Manifest.toml (100%) rename {julia => julia-minimal}/Project.toml (100%) rename {julia => julia-minimal}/README.md (100%) rename {julia => julia-minimal}/data/.gitkeep (100%) rename {julia => julia-minimal}/environment.yml (100%) rename {julia => julia-minimal}/notebooks/.gitkeep (100%) rename {julia => julia-minimal}/requirements.txt (100%) rename {julia => julia-minimal}/workflows/my-workflow.yaml (100%) rename {python => python-minimal}/.dockerignore (100%) rename {python => python-minimal}/.gitignore (100%) rename {python => python-minimal}/.gitlab-ci.yml (100%) rename {python => python-minimal}/.renku/renku.ini (100%) rename {python => python-minimal}/.renkulfsignore (100%) rename {python => python-minimal}/Dockerfile (100%) rename {python => python-minimal}/README.md (100%) rename {python => python-minimal}/data/.gitkeep (100%) rename {python => python-minimal}/environment.yml (100%) rename {python => python-minimal}/notebooks/.gitkeep (100%) rename {python => python-minimal}/requirements.txt (100%) rename {python => python-minimal}/workflows/my-workflow.yaml (100%) diff --git a/R/.dockerignore b/R-minimal/.dockerignore similarity index 100% rename from R/.dockerignore rename to R-minimal/.dockerignore diff --git a/R/.gitignore b/R-minimal/.gitignore similarity index 100% rename from R/.gitignore rename to R-minimal/.gitignore diff --git a/R/.gitlab-ci.yml b/R-minimal/.gitlab-ci.yml similarity index 100% rename from R/.gitlab-ci.yml rename to R-minimal/.gitlab-ci.yml diff --git a/R/.renku/renku.ini b/R-minimal/.renku/renku.ini similarity index 100% rename from R/.renku/renku.ini rename to R-minimal/.renku/renku.ini diff --git a/R/.renkulfsignore b/R-minimal/.renkulfsignore similarity index 100% rename from R/.renkulfsignore rename to R-minimal/.renkulfsignore diff --git a/R/Dockerfile b/R-minimal/Dockerfile similarity index 100% rename from R/Dockerfile rename to R-minimal/Dockerfile diff --git a/R/README.md b/R-minimal/README.md similarity index 100% rename from R/README.md rename to R-minimal/README.md diff --git a/R/data/.gitkeep b/R-minimal/data/.gitkeep similarity index 100% rename from R/data/.gitkeep rename to R-minimal/data/.gitkeep diff --git a/R/environment.yml b/R-minimal/environment.yml similarity index 100% rename from R/environment.yml rename to R-minimal/environment.yml diff --git a/R/install.R b/R-minimal/install.R similarity index 100% rename from R/install.R rename to R-minimal/install.R diff --git a/R/notebooks/.gitkeep b/R-minimal/notebooks/.gitkeep similarity index 100% rename from R/notebooks/.gitkeep rename to R-minimal/notebooks/.gitkeep diff --git a/R/requirements.txt b/R-minimal/requirements.txt similarity index 100% rename from R/requirements.txt rename to R-minimal/requirements.txt diff --git a/R/workflows/my-workflow.yaml b/R-minimal/workflows/my-workflow.yaml similarity index 100% rename from R/workflows/my-workflow.yaml rename to R-minimal/workflows/my-workflow.yaml diff --git a/R/{{ __sanitized_project_name__ }}.Rproj b/R-minimal/{{ __sanitized_project_name__ }}.Rproj similarity index 100% rename from R/{{ __sanitized_project_name__ }}.Rproj rename to R-minimal/{{ __sanitized_project_name__ }}.Rproj diff --git a/bioc/.dockerignore b/bioc-minimal/.dockerignore similarity index 100% rename from bioc/.dockerignore rename to bioc-minimal/.dockerignore diff --git a/bioc/.gitignore b/bioc-minimal/.gitignore similarity index 100% rename from bioc/.gitignore rename to bioc-minimal/.gitignore diff --git a/bioc/.gitlab-ci.yml b/bioc-minimal/.gitlab-ci.yml similarity index 100% rename from bioc/.gitlab-ci.yml rename to bioc-minimal/.gitlab-ci.yml diff --git a/bioc/.renku/renku.ini b/bioc-minimal/.renku/renku.ini similarity index 100% rename from bioc/.renku/renku.ini rename to bioc-minimal/.renku/renku.ini diff --git a/bioc/.renkulfsignore b/bioc-minimal/.renkulfsignore similarity index 100% rename from bioc/.renkulfsignore rename to bioc-minimal/.renkulfsignore diff --git a/bioc/Dockerfile b/bioc-minimal/Dockerfile similarity index 100% rename from bioc/Dockerfile rename to bioc-minimal/Dockerfile diff --git a/bioc/README.md b/bioc-minimal/README.md similarity index 100% rename from bioc/README.md rename to bioc-minimal/README.md diff --git a/bioc/data/.gitkeep b/bioc-minimal/data/.gitkeep similarity index 100% rename from bioc/data/.gitkeep rename to bioc-minimal/data/.gitkeep diff --git a/bioc/environment.yml b/bioc-minimal/environment.yml similarity index 100% rename from bioc/environment.yml rename to bioc-minimal/environment.yml diff --git a/bioc/install.R b/bioc-minimal/install.R similarity index 100% rename from bioc/install.R rename to bioc-minimal/install.R diff --git a/bioc/notebooks/.gitkeep b/bioc-minimal/notebooks/.gitkeep similarity index 100% rename from bioc/notebooks/.gitkeep rename to bioc-minimal/notebooks/.gitkeep diff --git a/bioc/requirements.txt b/bioc-minimal/requirements.txt similarity index 100% rename from bioc/requirements.txt rename to bioc-minimal/requirements.txt diff --git a/bioc/workflows/my-workflow.yaml b/bioc-minimal/workflows/my-workflow.yaml similarity index 100% rename from bioc/workflows/my-workflow.yaml rename to bioc-minimal/workflows/my-workflow.yaml diff --git a/bioc/{{ __sanitized_project_name__ }}.Rproj b/bioc-minimal/{{ __sanitized_project_name__ }}.Rproj similarity index 100% rename from bioc/{{ __sanitized_project_name__ }}.Rproj rename to bioc-minimal/{{ __sanitized_project_name__ }}.Rproj diff --git a/julia/.dockerignore b/julia-minimal/.dockerignore similarity index 100% rename from julia/.dockerignore rename to julia-minimal/.dockerignore diff --git a/julia/.gitignore b/julia-minimal/.gitignore similarity index 100% rename from julia/.gitignore rename to julia-minimal/.gitignore diff --git a/julia/.gitlab-ci.yml b/julia-minimal/.gitlab-ci.yml similarity index 100% rename from julia/.gitlab-ci.yml rename to julia-minimal/.gitlab-ci.yml diff --git a/julia/.renku/renku.ini b/julia-minimal/.renku/renku.ini similarity index 100% rename from julia/.renku/renku.ini rename to julia-minimal/.renku/renku.ini diff --git a/julia/.renkulfsignore b/julia-minimal/.renkulfsignore similarity index 100% rename from julia/.renkulfsignore rename to julia-minimal/.renkulfsignore diff --git a/julia/Dockerfile b/julia-minimal/Dockerfile similarity index 100% rename from julia/Dockerfile rename to julia-minimal/Dockerfile diff --git a/julia/Manifest.toml b/julia-minimal/Manifest.toml similarity index 100% rename from julia/Manifest.toml rename to julia-minimal/Manifest.toml diff --git a/julia/Project.toml b/julia-minimal/Project.toml similarity index 100% rename from julia/Project.toml rename to julia-minimal/Project.toml diff --git a/julia/README.md b/julia-minimal/README.md similarity index 100% rename from julia/README.md rename to julia-minimal/README.md diff --git a/julia/data/.gitkeep b/julia-minimal/data/.gitkeep similarity index 100% rename from julia/data/.gitkeep rename to julia-minimal/data/.gitkeep diff --git a/julia/environment.yml b/julia-minimal/environment.yml similarity index 100% rename from julia/environment.yml rename to julia-minimal/environment.yml diff --git a/julia/notebooks/.gitkeep b/julia-minimal/notebooks/.gitkeep similarity index 100% rename from julia/notebooks/.gitkeep rename to julia-minimal/notebooks/.gitkeep diff --git a/julia/requirements.txt b/julia-minimal/requirements.txt similarity index 100% rename from julia/requirements.txt rename to julia-minimal/requirements.txt diff --git a/julia/workflows/my-workflow.yaml b/julia-minimal/workflows/my-workflow.yaml similarity index 100% rename from julia/workflows/my-workflow.yaml rename to julia-minimal/workflows/my-workflow.yaml diff --git a/manifest.yaml b/manifest.yaml index d1913d4..5375268 100644 --- a/manifest.yaml +++ b/manifest.yaml @@ -1,24 +1,24 @@ -- folder: python +- id: python-minimal name: Basic Python (3.9) Project description: The simplest Python-3.9-based renku project with a basic directory structure and necessary supporting files. variables: {} icon: python-minimal.png -- folder: R +- id: R-minimal name: Basic R (4.2.0) Project description: The simplest R-4.2.0-based renku project with a basic directory structure and necessary supporting files. variables: {} icon: R-minimal.png -- folder: bioc +- id: bioc-minimal name: R-Bioconductor (3.15) Project description: The simplest R bioconductor-3.15-based renku project with a basic directory structure and necessary supporting files. variables: {} icon: bioconductor.png -- folder: julia +- id: julia-minimal name: Basic Julia (1.7.1) Project description: The simplest Julia 1.7.1-based renku project with a basic directory structure and necessary supporting files. variables: {} icon: julialang.png -- folder: minimal +- id: minimal name: Minimal Renku description: The simplest renku project template with files for renku CLI and launching projects on renkulab. variables: {} diff --git a/python/.dockerignore b/python-minimal/.dockerignore similarity index 100% rename from python/.dockerignore rename to python-minimal/.dockerignore diff --git a/python/.gitignore b/python-minimal/.gitignore similarity index 100% rename from python/.gitignore rename to python-minimal/.gitignore diff --git a/python/.gitlab-ci.yml b/python-minimal/.gitlab-ci.yml similarity index 100% rename from python/.gitlab-ci.yml rename to python-minimal/.gitlab-ci.yml diff --git a/python/.renku/renku.ini b/python-minimal/.renku/renku.ini similarity index 100% rename from python/.renku/renku.ini rename to python-minimal/.renku/renku.ini diff --git a/python/.renkulfsignore b/python-minimal/.renkulfsignore similarity index 100% rename from python/.renkulfsignore rename to python-minimal/.renkulfsignore diff --git a/python/Dockerfile b/python-minimal/Dockerfile similarity index 100% rename from python/Dockerfile rename to python-minimal/Dockerfile diff --git a/python/README.md b/python-minimal/README.md similarity index 100% rename from python/README.md rename to python-minimal/README.md diff --git a/python/data/.gitkeep b/python-minimal/data/.gitkeep similarity index 100% rename from python/data/.gitkeep rename to python-minimal/data/.gitkeep diff --git a/python/environment.yml b/python-minimal/environment.yml similarity index 100% rename from python/environment.yml rename to python-minimal/environment.yml diff --git a/python/notebooks/.gitkeep b/python-minimal/notebooks/.gitkeep similarity index 100% rename from python/notebooks/.gitkeep rename to python-minimal/notebooks/.gitkeep diff --git a/python/requirements.txt b/python-minimal/requirements.txt similarity index 100% rename from python/requirements.txt rename to python-minimal/requirements.txt diff --git a/python/workflows/my-workflow.yaml b/python-minimal/workflows/my-workflow.yaml similarity index 100% rename from python/workflows/my-workflow.yaml rename to python-minimal/workflows/my-workflow.yaml