190523_AMD_symposium.md

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Midwest Advanced Molecular Detection (AMD) Training Symposium

Public Health Genomics 101

Sponsored by Michigan Department of Health and Human Services (MDHHS) Bureau of Laboratories and the University of Michigan School of Public Health MAC-EPID Program

May 23, 2019 at University of Michigan (Ann Arbor, Michigan)

Agenda

8:00am   Welcome - Marty Soehnlen, PhD, MDHHS
              CDC Office of Advanced Molecular Detection - Nathelia Barnes, DHSc, Centers for Disease Control and Prevention

9:00am   Regional Round Tables

9:45am   Break

10:00am The Chemistry of AMD - Rebecca Kramer, MDHHS; Kevin Rodeman, MDHHS

11:00am Phylogenetics - Sebastian Zoellner, PhD, University of Michigan

12:00pm Lunch

1:00pm   Bioinformatics - Kelsey Florek, PhD, Wisconsin State Laboratory of Hygiene

2:00pm   Core Genome and MLST Basics - Heather Blankenship, PhD Candidate, Michigan State University

2:30pm   Break

2:45pm   Validation Strategies - Cassandra Campion, MS, Indiana State Department of Health

3:15pm   Using Information for Public Health Action

• Molecular HIV Surveillance (SHiNe) Shared HIV Networks - Mary-Grace Brandt, PhD, MDHHS
• KY Department for Public Health: Sequencing and Surveillance - Karim George, Kentucky Department of Health
• ODH MiSeq Instrument Validation (Limited Measures) - Keoni Omura, MS, Ohio Department of Health

4:00pm   Closeout and Next Steps