diff --git a/checkm/1.2.2/Dockerfile b/checkm/1.2.2/Dockerfile index 571add7de..3564e602e 100644 --- a/checkm/1.2.2/Dockerfile +++ b/checkm/1.2.2/Dockerfile @@ -45,5 +45,5 @@ RUN wget https://data.ace.uq.edu.au/public/CheckM_databases/checkm_data_2015_01_ checkm data setRoot checkm_db # run test with internal test data -RUN checkm lineage_wf -r ./checkm_db/test_data/ ./checkm_test_results +RUN checkm taxonomy_wf species "Escherichia coli" ./checkm_db/test_data/ ./checkm_test_results