Error when installing NonlinearSolve.jl v3.4.0 in Julia v1.9.4

[ranocha]

Describe the bug 🐞

NonlinearSolve.jl cannot be installed in Julia v1.9.4

Expected behavior

It can be installed and works.

Minimal Reproducible Example 👇

julia> import Pkg; Pkg.activate(temp = true); Pkg.add(name = "NonlinearSolve", version = "3.4.0")
  Activating new project at `/var/folders/s0/gb3lfkrs7k34x8xk_36lxcmw0000gp/T/jl_papRnZ`
   Resolving package versions...
    Updating `/private/var/folders/s0/gb3lfkrs7k34x8xk_36lxcmw0000gp/T/jl_papRnZ/Project.toml`
⌅ [8913a72c] + NonlinearSolve v3.4.0
    Updating `/private/var/folders/s0/gb3lfkrs7k34x8xk_36lxcmw0000gp/T/jl_papRnZ/Manifest.toml`
  [47edcb42] + ADTypes v0.2.7
⌅ [79e6a3ab] + Adapt v3.7.2
  [ec485272] + ArnoldiMethod v0.4.0
⌅ [4fba245c] + ArrayInterface v7.7.1
  [4c555306] + ArrayLayouts v1.9.1
  [62783981] + BitTwiddlingConvenienceFunctions v0.1.5
  [2a0fbf3d] + CPUSummary v0.2.4
  [fb6a15b2] + CloseOpenIntervals v0.1.12
  [38540f10] + CommonSolve v0.2.4
  [bbf7d656] + CommonSubexpressions v0.3.0
  [34da2185] + Compat v4.14.0
  [2569d6c7] + ConcreteStructs v0.2.3
  [187b0558] + ConstructionBase v1.5.5
  [adafc99b] + CpuId v0.3.1
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.18.18
  [e2d170a0] + DataValueInterfaces v1.0.0
⌃ [2b5f629d] + DiffEqBase v6.145.6
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.15.1
  [ffbed154] + DocStringExtensions v0.9.3
  [4e289a0a] + EnumX v1.0.4
⌅ [f151be2c] + EnzymeCore v0.6.6
  [e2ba6199] + ExprTools v0.1.10
  [7034ab61] + FastBroadcast v0.2.8
  [9aa1b823] + FastClosures v0.3.2
  [29a986be] + FastLapackInterface v2.0.2
  [1a297f60] + FillArrays v1.10.0
⌅ [6a86dc24] + FiniteDiff v2.22.0
  [f6369f11] + ForwardDiff v0.10.36
  [069b7b12] + FunctionWrappers v1.1.3
  [77dc65aa] + FunctionWrappersWrappers v0.1.3
⌃ [46192b85] + GPUArraysCore v0.1.5
  [86223c79] + Graphs v1.10.0
  [3e5b6fbb] + HostCPUFeatures v0.1.16
  [615f187c] + IfElse v0.1.1
  [d25df0c9] + Inflate v0.1.4
  [92d709cd] + IrrationalConstants v0.2.2
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.5.0
⌅ [ef3ab10e] + KLU v0.4.1
  [ba0b0d4f] + Krylov v0.9.5
  [10f19ff3] + LayoutPointers v0.1.15
  [50d2b5c4] + Lazy v0.15.1
  [5078a376] + LazyArrays v1.9.1
  [d3d80556] + LineSearches v7.2.0
⌅ [7ed4a6bd] + LinearSolve v2.22.1
  [2ab3a3ac] + LogExpFunctions v0.3.27
  [bdcacae8] + LoopVectorization v0.12.169
  [1914dd2f] + MacroTools v0.5.13
  [d125e4d3] + ManualMemory v0.1.8
  [a3b82374] + MatrixFactorizations v2.1.1
  [bb5d69b7] + MaybeInplace v0.1.2
  [46d2c3a1] + MuladdMacro v0.2.4
  [d41bc354] + NLSolversBase v7.8.3
  [77ba4419] + NaNMath v1.0.2
⌅ [8913a72c] + NonlinearSolve v3.4.0
  [6fe1bfb0] + OffsetArrays v1.13.0
  [bac558e1] + OrderedCollections v1.6.3
  [65ce6f38] + PackageExtensionCompat v1.0.2
  [d96e819e] + Parameters v0.12.3
  [f517fe37] + Polyester v0.7.12
  [1d0040c9] + PolyesterWeave v0.2.1
⌅ [d236fae5] + PreallocationTools v0.4.13
  [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [3cdcf5f2] + RecipesBase v1.3.4
⌅ [731186ca] + RecursiveArrayTools v3.3.3
  [f2c3362d] + RecursiveFactorization v0.2.21
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.0
  [7e49a35a] + RuntimeGeneratedFunctions v0.5.12
  [94e857df] + SIMDTypes v0.1.0
  [476501e8] + SLEEFPirates v0.6.42
⌅ [0bca4576] + SciMLBase v2.15.2
⌅ [c0aeaf25] + SciMLOperators v0.3.7
  [efcf1570] + Setfield v1.1.1
⌅ [727e6d20] + SimpleNonlinearSolve v1.4.0
  [699a6c99] + SimpleTraits v0.9.4
  [47a9eef4] + SparseDiffTools v2.17.0
  [e56a9233] + Sparspak v0.3.9
  [276daf66] + SpecialFunctions v2.3.1
⌅ [aedffcd0] + Static v0.8.9
  [0d7ed370] + StaticArrayInterface v1.5.0
  [90137ffa] + StaticArrays v1.9.3
  [1e83bf80] + StaticArraysCore v1.4.2
  [7792a7ef] + StrideArraysCore v0.5.2
⌅ [2efcf032] + SymbolicIndexingInterface v0.3.1
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.11.1
  [8290d209] + ThreadingUtilities v0.5.2
⌅ [d5829a12] + TriangularSolve v0.1.20
  [410a4b4d] + Tricks v0.1.8
  [781d530d] + TruncatedStacktraces v1.4.0
  [3a884ed6] + UnPack v1.0.2
  [3d5dd08c] + VectorizationBase v0.21.65
  [19fa3120] + VertexSafeGraphs v0.2.0
  [1d5cc7b8] + IntelOpenMP_jll v2024.0.2+0
  [856f044c] + MKL_jll v2024.0.0+0
  [efe28fd5] + OpenSpecFun_jll v0.5.5+0
  [0dad84c5] + ArgTools v1.1.1
  [56f22d72] + Artifacts
  [2a0f44e3] + Base64
  [ade2ca70] + Dates
  [8ba89e20] + Distributed
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching
  [9fa8497b] + Future
  [b77e0a4c] + InteractiveUtils
  [4af54fe1] + LazyArtifacts
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2
  [8f399da3] + Libdl
  [37e2e46d] + LinearAlgebra
  [56ddb016] + Logging
  [d6f4376e] + Markdown
  [a63ad114] + Mmap
  [ca575930] + NetworkOptions v1.2.0
  [44cfe95a] + Pkg v1.9.2
  [de0858da] + Printf
  [3fa0cd96] + REPL
  [9a3f8284] + Random
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization
  [1a1011a3] + SharedArrays
  [6462fe0b] + Sockets
  [2f01184e] + SparseArrays
  [10745b16] + Statistics v1.9.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test
  [cf7118a7] + UUIDs
  [4ec0a83e] + Unicode
  [e66e0078] + CompilerSupportLibraries_jll v1.0.5+0
  [deac9b47] + LibCURL_jll v8.4.0+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.2+0
  [14a3606d] + MozillaCACerts_jll v2022.10.11
  [4536629a] + OpenBLAS_jll v0.3.21+4
  [05823500] + OpenLibm_jll v0.8.1+0
  [bea87d4a] + SuiteSparse_jll v5.10.1+6
  [83775a58] + Zlib_jll v1.2.13+0
  [8e850b90] + libblastrampoline_jll v5.8.0+0
  [8e850ede] + nghttp2_jll v1.52.0+1
  [3f19e933] + p7zip_jll v17.4.0+0
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`
Precompiling project...
  ✗ NonlinearSolve
  0 dependencies successfully precompiled in 6 seconds. 128 already precompiled.
  1 dependency errored. To see a full report either run `import Pkg; Pkg.precompile()` or load the package

julia> using NonlinearSolve
[ Info: Precompiling NonlinearSolve [8913a72c-1f9b-4ce2-8d82-65094dcecaec]
WARNING: Method definition *(MatrixFactorizations.LayoutQ{T} where T, MatrixFactorizations.LayoutQ{T} where T) in module MatrixFactorizations at /Users/hendrik/.julia/packages/MatrixFactorizations/wSXzP/src/MatrixFactorizations.jl:124 overwritten at /Users/hendrik/.julia/packages/MatrixFactorizations/wSXzP/src/MatrixFactorizations.jl:70.
  ** incremental compilation may be fatally broken for this module **

ERROR: LoadError: UndefRefError: access to undefined reference
Stacktrace:
 [1] getindex
   @ ./essentials.jl:13 [inlined]
 [2] invalidation_leaves(invlist::Vector{Any})
   @ PrecompileTools ~/.julia/packages/PrecompileTools/L8A3n/src/invalidations.jl:42
 [3] recompile_invalidations(__module__::Module, expr::Any)
   @ PrecompileTools ~/.julia/packages/PrecompileTools/L8A3n/src/invalidations.jl:23
 [4] top-level scope
   @ ~/.julia/packages/NonlinearSolve/KlGj2/src/NonlinearSolve.jl:10
 [5] include
   @ ./Base.jl:457 [inlined]
 [6] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
   @ Base ./loading.jl:2049
 [7] top-level scope
   @ stdin:3
in expression starting at /Users/hendrik/.julia/packages/NonlinearSolve/KlGj2/src/NonlinearSolve.jl:1
in expression starting at stdin:3
ERROR: Failed to precompile NonlinearSolve [8913a72c-1f9b-4ce2-8d82-65094dcecaec] to "/Users/hendrik/.julia/compiled/v1.9/NonlinearSolve/jl_jR6BY3".
Stacktrace:
 [1] error(s::String)
   @ Base ./error.jl:35
 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
   @ Base ./loading.jl:2294
 [3] compilecache
   @ ./loading.jl:2167 [inlined]
 [4] _require(pkg::Base.PkgId, env::String)
   @ Base ./loading.jl:1805
 [5] _require_prelocked(uuidkey::Base.PkgId, env::String)
   @ Base ./loading.jl:1660
 [6] macro expansion
   @ ./loading.jl:1648 [inlined]
 [7] macro expansion
   @ ./lock.jl:267 [inlined]
 [8] require(into::Module, mod::Symbol)
   @ Base ./loading.jl:1611

julia> f(u, p) = u .* u .- 2.0
f (generic function with 1 method)

julia> u0 = (1.0, 2.0) # brackets
(1.0, 2.0)

julia> prob = IntervalNonlinearProblem(f, u0)
ERROR: UndefVarError: `IntervalNonlinearProblem` not defined
Stacktrace:
 [1] top-level scope
   @ REPL[5]:1

julia> sol = solve(prob)
ERROR: UndefVarError: `solve` not defined
Stacktrace:
 [1] top-level scope
   @ REPL[6]:1

Error & Stacktrace ⚠️

See above

Environment (please complete the following information):

• Output of using Pkg; Pkg.status()

julia> using Pkg; Pkg.status()
Status 
⌅ [8913a72c] NonlinearSolve v3.4.0
Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated`

• Output of using Pkg; Pkg.status(; mode = PKGMODE_MANIFEST)

julia> using Pkg; Pkg.status(; mode = PKGMODE_MANIFEST)
Status 
  [47edcb42] ADTypes v0.2.7
⌅ [79e6a3ab] Adapt v3.7.2
  [ec485272] ArnoldiMethod v0.4.0
⌅ [4fba245c] ArrayInterface v7.7.1
  [4c555306] ArrayLayouts v1.9.1
  [62783981] BitTwiddlingConvenienceFunctions v0.1.5
  [2a0fbf3d] CPUSummary v0.2.4
  [fb6a15b2] CloseOpenIntervals v0.1.12
  [38540f10] CommonSolve v0.2.4
  [bbf7d656] CommonSubexpressions v0.3.0
  [34da2185] Compat v4.14.0
  [2569d6c7] ConcreteStructs v0.2.3
  [187b0558] ConstructionBase v1.5.5
  [adafc99b] CpuId v0.3.1
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.18.18
  [e2d170a0] DataValueInterfaces v1.0.0
⌃ [2b5f629d] DiffEqBase v6.145.6
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [ffbed154] DocStringExtensions v0.9.3
  [4e289a0a] EnumX v1.0.4
⌅ [f151be2c] EnzymeCore v0.6.6
  [e2ba6199] ExprTools v0.1.10
  [7034ab61] FastBroadcast v0.2.8
  [9aa1b823] FastClosures v0.3.2
  [29a986be] FastLapackInterface v2.0.2
  [1a297f60] FillArrays v1.10.0
⌅ [6a86dc24] FiniteDiff v2.22.0
  [f6369f11] ForwardDiff v0.10.36
  [069b7b12] FunctionWrappers v1.1.3
  [77dc65aa] FunctionWrappersWrappers v0.1.3
⌃ [46192b85] GPUArraysCore v0.1.5
  [86223c79] Graphs v1.10.0
  [3e5b6fbb] HostCPUFeatures v0.1.16
  [615f187c] IfElse v0.1.1
  [d25df0c9] Inflate v0.1.4
  [92d709cd] IrrationalConstants v0.2.2
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.5.0
⌅ [ef3ab10e] KLU v0.4.1
  [ba0b0d4f] Krylov v0.9.5
  [10f19ff3] LayoutPointers v0.1.15
  [50d2b5c4] Lazy v0.15.1
  [5078a376] LazyArrays v1.9.1
  [d3d80556] LineSearches v7.2.0
⌅ [7ed4a6bd] LinearSolve v2.22.1
  [2ab3a3ac] LogExpFunctions v0.3.27
  [bdcacae8] LoopVectorization v0.12.169
  [1914dd2f] MacroTools v0.5.13
  [d125e4d3] ManualMemory v0.1.8
  [a3b82374] MatrixFactorizations v2.1.1
  [bb5d69b7] MaybeInplace v0.1.2
  [46d2c3a1] MuladdMacro v0.2.4
  [d41bc354] NLSolversBase v7.8.3
  [77ba4419] NaNMath v1.0.2
⌅ [8913a72c] NonlinearSolve v3.4.0
  [6fe1bfb0] OffsetArrays v1.13.0
  [bac558e1] OrderedCollections v1.6.3
  [65ce6f38] PackageExtensionCompat v1.0.2
  [d96e819e] Parameters v0.12.3
  [f517fe37] Polyester v0.7.12
  [1d0040c9] PolyesterWeave v0.2.1
⌅ [d236fae5] PreallocationTools v0.4.13
  [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [3cdcf5f2] RecipesBase v1.3.4
⌅ [731186ca] RecursiveArrayTools v3.3.3
  [f2c3362d] RecursiveFactorization v0.2.21
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.0
  [7e49a35a] RuntimeGeneratedFunctions v0.5.12
  [94e857df] SIMDTypes v0.1.0
  [476501e8] SLEEFPirates v0.6.42
⌅ [0bca4576] SciMLBase v2.15.2
⌅ [c0aeaf25] SciMLOperators v0.3.7
  [efcf1570] Setfield v1.1.1
⌅ [727e6d20] SimpleNonlinearSolve v1.4.0
  [699a6c99] SimpleTraits v0.9.4
  [47a9eef4] SparseDiffTools v2.17.0
  [e56a9233] Sparspak v0.3.9
  [276daf66] SpecialFunctions v2.3.1
⌅ [aedffcd0] Static v0.8.9
  [0d7ed370] StaticArrayInterface v1.5.0
  [90137ffa] StaticArrays v1.9.3
  [1e83bf80] StaticArraysCore v1.4.2
  [7792a7ef] StrideArraysCore v0.5.2
⌅ [2efcf032] SymbolicIndexingInterface v0.3.1
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.11.1
  [8290d209] ThreadingUtilities v0.5.2
⌅ [d5829a12] TriangularSolve v0.1.20
  [410a4b4d] Tricks v0.1.8
  [781d530d] TruncatedStacktraces v1.4.0
  [3a884ed6] UnPack v1.0.2
  [3d5dd08c] VectorizationBase v0.21.65
  [19fa3120] VertexSafeGraphs v0.2.0
  [1d5cc7b8] IntelOpenMP_jll v2024.0.2+0
  [856f044c] MKL_jll v2024.0.0+0
  [efe28fd5] OpenSpecFun_jll v0.5.5+0
  [0dad84c5] ArgTools v1.1.1
  [56f22d72] Artifacts
  [2a0f44e3] Base64
  [ade2ca70] Dates
  [8ba89e20] Distributed
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching
  [9fa8497b] Future
  [b77e0a4c] InteractiveUtils
  [4af54fe1] LazyArtifacts
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2
  [8f399da3] Libdl
  [37e2e46d] LinearAlgebra
  [56ddb016] Logging
  [d6f4376e] Markdown
  [a63ad114] Mmap
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.9.2
  [de0858da] Printf
  [3fa0cd96] REPL
  [9a3f8284] Random
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization
  [1a1011a3] SharedArrays
  [6462fe0b] Sockets
  [2f01184e] SparseArrays
  [10745b16] Statistics v1.9.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test
  [cf7118a7] UUIDs
  [4ec0a83e] Unicode
  [e66e0078] CompilerSupportLibraries_jll v1.0.5+0
  [deac9b47] LibCURL_jll v8.4.0+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.2+0
  [14a3606d] MozillaCACerts_jll v2022.10.11
  [4536629a] OpenBLAS_jll v0.3.21+4
  [05823500] OpenLibm_jll v0.8.1+0
  [bea87d4a] SuiteSparse_jll v5.10.1+6
  [83775a58] Zlib_jll v1.2.13+0
  [8e850b90] libblastrampoline_jll v5.8.0+0
  [8e850ede] nghttp2_jll v1.52.0+1
  [3f19e933] p7zip_jll v17.4.0+0
Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`

• Output of versioninfo()

julia> versioninfo()
Julia Version 1.9.4
Commit 8e5136fa297 (2023-11-14 08:46 UTC)
Build Info:
  Official https://julialang.org/ release

Additional context

I observed this in our CI runs, e.g., https://github.com/SKopecz/PositiveIntegrators.jl/actions/runs/8597851891/job/23557395790?pr=61#step:6:236

[himanshugupta1009]

The same issue exists for Julia 1.9.3 as well.

[avik-pal]

The new release of https://github.com/JuliaLinearAlgebra/MatrixFactorizations.jl should fix this

[ranocha]

Thanks!