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setup.py
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import os.path
import sys
from setuptools import find_packages
from distutils.core import setup
if sys.version_info[:2] < (3, 8):
sys.stderr.write("Error: at least Python 3.8 or later is required.\n")
sys.exit(1)
here = os.path.abspath(os.path.dirname(__file__))
exec(open(os.path.join(here, 'qapa/version.py')).read())
setup(name='qapa',
version=__version__, # noqa: F821
description='RNA-seq Quantification of Alternative Polyadenylation (QAPA)',
url='http://github.com/morrislab/qapa',
author='Kevin Ha',
author_email='[email protected]',
license='GPLv3',
packages=find_packages(),
scripts=['scripts/create_merged_data.R',
'scripts/compute_pau.R'],
install_requires=['setuptools',
'pandas >= 0.24',
'numpy >= 1.10.0',
'biopython >= 1.76',
'pybedtools >= 0.7.9'
],
entry_points={
'console_scripts': [
'qapa = qapa.qapa:main'
]
},
python_requires='~=3.8',
classifiers=[
'Development Status :: 4 - Beta',
'Intended Audience :: Science/Research',
'License :: OSI Approved :: GNU General Public License v3 (GPLv3)',
'Topic :: Scientific/Engineering :: Bio-Informatics',
'Programming Language :: Python',
'Programming Language :: Python :: 3',
'Programming Language :: Python :: 3.8',
],
zip_safe=False
)