From b3c7e3f6d56afc964634e7a52e71867d9b10eacf Mon Sep 17 00:00:00 2001
From: Danny Farrell <danpf@uw.edu>
Date: Wed, 19 Jun 2019 07:23:35 -0700
Subject: [PATCH] make install deps copy files not folders

---
 fragment_tools/install_dependencies.pl | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/fragment_tools/install_dependencies.pl b/fragment_tools/install_dependencies.pl
index 220bf7e15..783d8676d 100755
--- a/fragment_tools/install_dependencies.pl
+++ b/fragment_tools/install_dependencies.pl
@@ -302,9 +302,9 @@
 chdir($Bin);
 
 if (!$skip_nr && $database eq "localnrcopy" && ($overwrite || !-s "$datdir/nr.pal")) {
-	print "Copying your local nr database to $datdir\n...";
-	my $copy_cmd = "rsync -rav $ENV{'LOCAL_NR_COPY'} $datdir";
-	print $copy_cmd;
+	print "Copying your local nr database to $datdir...\n";
+	my $copy_cmd = "rsync -rav $ENV{'LOCAL_NR_COPY'}/* $datdir";
+	print "$copy_cmd\n";
 	system($copy_cmd);
 
 	$SIG{INT} = \&clean_nr;