format

Robaina · Sep 11, 2023 · 8de18ee · 8de18ee
1 parent bac3fcc
commit 8de18ee
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diff --git a/src/brendapyrser/__init__.py b/src/brendapyrser/__init__.py
@@ -1,3 +0,0 @@
-from .parser import (BRENDA, ReactionList,
-                     EnzymeDict, EnzymePropertyDict,
-                     EnzymeConditionDict, Reaction)

diff --git a/src/brendapyrser/constants.py b/src/brendapyrser/constants.py
@@ -6,60 +6,60 @@
 """
 
 fields = {
-    'AC': 'activating compound',
-    'AP': 'application',
-    'CF': 'cofactor',
-    'CL': 'cloned',
-    'CR': 'crystallization',
-    'EN': 'engineering',
-    'EXP': 'expression',
-    'GI': 'general information on enzyme',
-    'GS': 'general stability',
-    'IC50': 'IC-50 Value',
-    'ID': 'EC-class',
-    'IN': 'inhibitors',
-    'KKM': 'Kcat/KM-Value substrate in {...}',
-    'KI': 'Ki-value, inhibitor in {...}',
-    'KM': 'KM-value, substrate in {...}',
-    'LO': 'localization',
-    'ME': 'metals/ions',
-    'MW': 'molecular weight',
-    'NSP': 'natural substrates/products	reversibilty information in {...}',
-    'OS': 'oxygen stability',
-    'OSS': 'organic solvent stability',
-    'PHO': 'pH-optimum',
-    'PHR': 'pH-range',
-    'PHS': 'pH stability',
-    'PI': 'isoelectric point',
-    'PM': 'posttranslation modification',
-    'PR': 'protein',
-    'PU': 'purification',
-    'RE': 'reaction catalyzed',
-    'RF': 'references',
-    'REN': 'renatured',
-    'RN': 'accepted name (IUPAC)',
-    'RT': 'reaction type',
-    'SA': 'specific activity',
-    'SN': 'synonyms',
-    'SP': 'substrates/products, reversibilty information in {...}',
-    'SS': 'storage stability',
-    'ST': 'source/tissue',
-    'SU': 'subunits',
-    'SY': 'systematic name',
-    'TN': 'turnover number, substrate in {...}',
-    'TO': 'temperature optimum',
-    'TR': 'temperature range',
-    'TS': 'temperature stability'
+    "AC": "activating compound",
+    "AP": "application",
+    "CF": "cofactor",
+    "CL": "cloned",
+    "CR": "crystallization",
+    "EN": "engineering",
+    "EXP": "expression",
+    "GI": "general information on enzyme",
+    "GS": "general stability",
+    "IC50": "IC-50 Value",
+    "ID": "EC-class",
+    "IN": "inhibitors",
+    "KKM": "Kcat/KM-Value substrate in {...}",
+    "KI": "Ki-value, inhibitor in {...}",
+    "KM": "KM-value, substrate in {...}",
+    "LO": "localization",
+    "ME": "metals/ions",
+    "MW": "molecular weight",
+    "NSP": "natural substrates/products	reversibilty information in {...}",
+    "OS": "oxygen stability",
+    "OSS": "organic solvent stability",
+    "PHO": "pH-optimum",
+    "PHR": "pH-range",
+    "PHS": "pH stability",
+    "PI": "isoelectric point",
+    "PM": "posttranslation modification",
+    "PR": "protein",
+    "PU": "purification",
+    "RE": "reaction catalyzed",
+    "RF": "references",
+    "REN": "renatured",
+    "RN": "accepted name (IUPAC)",
+    "RT": "reaction type",
+    "SA": "specific activity",
+    "SN": "synonyms",
+    "SP": "substrates/products, reversibilty information in {...}",
+    "SS": "storage stability",
+    "ST": "source/tissue",
+    "SU": "subunits",
+    "SY": "systematic name",
+    "TN": "turnover number, substrate in {...}",
+    "TO": "temperature optimum",
+    "TR": "temperature range",
+    "TS": "temperature stability",
 }
 
 units = {
-    'KM': 'mM',
-    'KI': 'mM',
-    'TN': '$s^{-1}$',
-    'SA': '$µmol.min^{-1}.mg^{-1}$',
-    'KKM': '$mM^{-1}.s^{-1}$',
-    'TO': '${}^oC$',
-    'TR': '${}^oC$',
-    'TS': '${}^oC$',
-    'MW': 'Da'
-}
+    "KM": "mM",
+    "KI": "mM",
+    "TN": "$s^{-1}$",
+    "SA": "$µmol.min^{-1}.mg^{-1}$",
+    "KKM": "$mM^{-1}.s^{-1}$",
+    "TO": "${}^oC$",
+    "TR": "${}^oC$",
+    "TS": "${}^oC$",
+    "MW": "Da",
+}