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Working out which samples had strong correlation #14

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NWGLH-CSBioinformatics opened this issue Apr 8, 2020 · 0 comments
Open

Working out which samples had strong correlation #14

NWGLH-CSBioinformatics opened this issue Apr 8, 2020 · 0 comments

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@NWGLH-CSBioinformatics
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Hello,

Is there a way to work out which samples were used as part of the reference set for making a CNV call? The only information easily accessible is the number used in "comp" column. I am using Rstudio and when it opens up CNVcalls*.Rdata it has difficulty in parsing it in a sensible format.

Any advise or commands to use, to extract the individual detail would be helpful. Thanks in advance.

Sanjeev

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