From 8ad64e57fa94a7eaed5656bad3e2e7df40f49b49 Mon Sep 17 00:00:00 2001 From: ecwood Date: Thu, 27 Jul 2023 15:27:16 -0700 Subject: [PATCH] #321 change filename in config as well --- snakemake-config-var.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/snakemake-config-var.yaml b/snakemake-config-var.yaml index e901c548..52b4f0fe 100644 --- a/snakemake-config-var.yaml +++ b/snakemake-config-var.yaml @@ -218,7 +218,7 @@ disgenet_output_nodes_file: ${BUILD_DIR}/${disgenet_output_base}${nodes_suffix}$ disgenet_output_edges_file: ${BUILD_DIR}/${disgenet_output_base}${edges_suffix}${test_suffix}.jsonl kegg_extraction_base: extract-kegg -kegg_conversion_base: kegg_json_to_kg_jsonl +kegg_conversion_base: kegg_jsonl_to_kg_jsonl kegg_output_base: kg2-kegg kegg_extraction_script: ${CODE_DIR}/${kegg_extraction_base}.sh kegg_extraction_log: ${BUILD_DIR}/${kegg_extraction_base}${test_suffix}.log