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include more packages #9

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PeerHerholz opened this issue Jan 18, 2019 · 4 comments
Open

include more packages #9

PeerHerholz opened this issue Jan 18, 2019 · 4 comments
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enhancement New feature or request help wanted Extra attention is needed

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@PeerHerholz
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PeerHerholz commented Jan 18, 2019

Summary

This will be a permanently open issue to gather further tools and packages.

There are some other cool defacing tools out there we should include in BIDSonym.
For example: DeepDeface.

Further software will be collected and documented in this issue, with the participating (and all other) folks deciding which tools will be included.

@PeerHerholz PeerHerholz changed the title include more pacakges include more packages Jan 28, 2019
@PeerHerholz PeerHerholz added enhancement New feature or request help wanted Extra attention is needed labels Jan 28, 2019
@PeerHerholz
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Just discovered that FSL now also has a defacing tool which is based on the one from UK Biobank. It's already included being called fsl_deface, however apparently not working properly (e.g., see here). Once it has been tested and working properly, we should include it, as we already have FSL in the docker container.

@PeerHerholz
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We should also add mridefacer!

@PeerHerholz
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mridefacer was added here.

@yarikoptic
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yes --- would be great to see fsl_deface be interfaced by BIDSonym!

@PeerHerholz PeerHerholz self-assigned this Aug 12, 2020
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