diff --git a/docker/Dockerfile.tbtamr-0.9.9 b/docker/Dockerfile.tbtamr-0.9.9 index 6c03cad..79c960f 100644 --- a/docker/Dockerfile.tbtamr-0.9.9 +++ b/docker/Dockerfile.tbtamr-0.9.9 @@ -27,7 +27,7 @@ RUN curl -Ls https://micro.mamba.pm/api/micromamba/linux-64/latest| tar -xvj bin RUN micromamba install --yes --name base --channel conda-forge --channel bioconda jq requests xlsxwriter tbtamr RUN micromamba install --yes --name base --channel conda-forge --channel bioconda gatk4 RUN micromamba install --yes --name base --channel conda-forge --channel bioconda samtools -RUN micromamba install --yes bioconda freebayes==1.3.6 #STDERR in current version of freebayes +RUN micromamba install --yes --name base --channel conda-forge --channel bioconda freebayes==1.3.6 #STDERR in current version of freebayes RUN micromamba clean --all --yes # hardcode 'base' env bin into PATH, so conda env does not have to be "activated" at run time