All notable changes to Genvisis will be documented in this file.
Sex specific chrX shadowing using artificial or biological strategies, addresses #153
Fixed issue where affy import was producing homozygous only calls #164
Bug fixes for mis-indexed on the fly gc Correction #141
Genvisis is now a Maven project!
Bug fixes with gc correcting of terrible samples
- auto fix file permission issues (make executable) associated with affymetrix power tools in linux/mac envs
- Corrected introduced error causing MitoPipeline to half gc-correct
Reorganized mitoPipeline
- Default plotting types for mtDNA PC evaluation, now does individual plots for each variable.
- PC correction iterator reporting one less PC than specified
- Finalized Beta optimization in MitoPipeLine
- Long format parsing is multi-threaded if more than one long format file is present
- Fixed issue where MitoPipeline was not downloading beta files
- Possible fix to issue, checking for NullPointerException when reading src files
- Also, addressed the issue where src files could fail import without a final warning.
- Automatic update check when GUI is launched
- Initial Official versioning
- Versioning given by the build.xml file
- an example of the removed heading