From a8d4e047fd31311eb9f7b58b7b7be8d59233bee6 Mon Sep 17 00:00:00 2001 From: Derek Maggio Date: Mon, 22 Jul 2024 06:41:55 -0700 Subject: [PATCH 1/8] Auto stash before checking out "origin/edge" --- performance-metrics/setup.py | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/performance-metrics/setup.py b/performance-metrics/setup.py index a0261bd7fdc..081346a6103 100755 --- a/performance-metrics/setup.py +++ b/performance-metrics/setup.py @@ -53,7 +53,10 @@ def get_version(): KEYWORDS = ["robots", "protocols", "synbio", "pcr", "automation", "lab"] DESCRIPTION = "Library for working with performance metrics on the Opentrons robots" PACKAGES = find_packages(where="src", exclude=["tests.*", "tests"]) -INSTALL_REQUIRES = [] +INSTALL_REQUIRES = [ + "psutil==6.0.0; sys_platform=='linux'", + "systemd-python==234; sys_platform=='linux'" +] def read(*parts): From 9b857a151ffc707dc40b1ccc5ddf7d1bdbdf667b Mon Sep 17 00:00:00 2001 From: Derek Maggio Date: Mon, 22 Jul 2024 11:12:47 -0700 Subject: [PATCH 2/8] update pipfiles --- robot-server/Pipfile | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/robot-server/Pipfile b/robot-server/Pipfile index c66f132ecd4..03e6b0e5f00 100755 --- a/robot-server/Pipfile +++ b/robot-server/Pipfile @@ -37,7 +37,7 @@ sqlalchemy2-stubs = "==0.0.2a21" python-box = "==6.1.0" types-paho-mqtt = "==1.6.0.20240106" pyusb = "==1.2.1" -performance-metrics = {file = "../performance-metrics", editable = true} + [packages] anyio = "==3.7.1" @@ -64,3 +64,4 @@ opentrons = { editable = true, path = "../api"} opentrons-shared-data = { editable = true, path = "../shared-data/python" } server-utils = {editable = true, path = "./../server-utils"} robot-server = { editable = true, path = "."} +performance-metrics = {file = "../performance-metrics", editable = true} From 038a7c272ccb3c34106e1ec6331b735022483aa3 Mon Sep 17 00:00:00 2001 From: Derek Maggio Date: Tue, 23 Jul 2024 10:41:21 -0700 Subject: [PATCH 3/8] do I maybe add it to setup.py? --- robot-server/setup.py | 1 + 1 file changed, 1 insertion(+) diff --git a/robot-server/setup.py b/robot-server/setup.py index 7fcdabade82..348dad80868 100755 --- a/robot-server/setup.py +++ b/robot-server/setup.py @@ -55,6 +55,7 @@ def get_version(): f"opentrons=={VERSION}", f"opentrons-shared-data=={VERSION}", f"server-utils=={VERSION}", + f"performance-metrics=={VERSION}", "anyio==3.7.1", "fastapi==0.99.1", "python-dotenv==1.0.1", From a68a053faa1135703c457b1820d12859dfe378e4 Mon Sep 17 00:00:00 2001 From: Derek Maggio Date: Tue, 23 Jul 2024 12:14:52 -0700 Subject: [PATCH 4/8] face palm, need to update the lock file --- robot-server/Pipfile.lock | 545 +++++++++++++++++++++++--------------- 1 file changed, 326 insertions(+), 219 deletions(-) diff --git a/robot-server/Pipfile.lock b/robot-server/Pipfile.lock index 0f33283b0ee..39936c5117a 100644 --- a/robot-server/Pipfile.lock +++ b/robot-server/Pipfile.lock @@ -1,7 +1,7 @@ { "_meta": { "hash": { - "sha256": "f43123500e774f5b9a92f2be8ae39a04af8df7ba2ae4b2a505f1bb4b751cc30a" + "sha256": "c4866d66561f1c6c1281d5d1ae5579719441610fb1d00d898575a22ce6e82b87" }, "pipfile-spec": 6, "requires": { @@ -100,6 +100,7 @@ "sha256:25816a9eef030c774beaee22189a24e29bc43f81cebe574ef723851eaf89ddee", "sha256:9651e1373873c75786101330e302e114f85b6e8b5ad70b491497c8b3609a8449" ], + "markers": "python_version >= '3.8'", "version": "==0.3.1" }, "aiosignal": { @@ -154,11 +155,11 @@ }, "exceptiongroup": { "hashes": [ - "sha256:5258b9ed329c5bbdd31a309f53cbfb0b155341807f6ff7606a1e801a891b29ad", - "sha256:a4785e48b045528f5bfe627b6ad554ff32def154f42372786903b7abcfe1aa16" + "sha256:3111b9d131c238bec2f8f516e123e14ba243563fb135d3fe885990585aa7795b", + "sha256:47c2edf7c6738fafb49fd34290706d1a1a2f4d1c6df275526b62cbb4aa5393cc" ], "markers": "python_version < '3.11'", - "version": "==1.2.1" + "version": "==1.2.2" }, "fastapi": { "hashes": [ @@ -335,11 +336,19 @@ }, "jsonschema": { "hashes": [ - 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"sha256:f35b34a5184d5e0cc360b61664c1c06e866aab077b5a7c538a3e20c8fcdbf90b", + "sha256:f3d73022990ab0c8b172cce57c69fd9a89c24fd473a5e79cbce92df87e3d9c48", + "sha256:f5b8353ea1a4d7dfb59a7f45c04df66ecfd363bb5b35f33b11ea579111d4655f", + "sha256:f809a17cc78bd331e137caa25262b507225854073fd319e987bd216bed911b7c", + "sha256:f9bc4161bd3b970cd6a6fcda70583ad4afd10f2750609fb1f3ca9505050d4ef3", + "sha256:fdf4890cda3b59170009d012fca3294c00140e7f2abe1910e6a730809d0f3f9b" ], "markers": "python_version >= '3.8'", - "version": "==0.19.0" + "version": "==0.19.1" }, "ruamel.yaml": { "hashes": [ From 5b7caf9eb7772a343acbc4674c02e2b7cb073e4c Mon Sep 17 00:00:00 2001 From: Derek Maggio Date: Thu, 25 Jul 2024 09:29:02 -0700 Subject: [PATCH 6/8] Change file to path 2 days. 2 days it took me to figure this out. So much logging, debugging and so many builds, for this. I had to literally go into the micropipenv source code to figure out why it was doing this. Its fixes like this that make me wish I could retire. But alas, I can't --- performance-metrics/Pipfile | 2 +- performance-metrics/Pipfile.lock | 16 ++++++++-------- robot-server/Pipfile | 2 +- robot-server/Pipfile.lock | 4 ++-- 4 files changed, 12 insertions(+), 12 deletions(-) diff --git a/performance-metrics/Pipfile b/performance-metrics/Pipfile index b57cd339814..7f37e931f76 100644 --- a/performance-metrics/Pipfile +++ b/performance-metrics/Pipfile @@ -4,7 +4,7 @@ verify_ssl = true name = "pypi" [packages] -performance-metrics = {file = ".", editable = true} +performance-metrics = {path = ".", editable = true} psutil = "==6.0.0" systemd-python = "234" diff --git a/performance-metrics/Pipfile.lock b/performance-metrics/Pipfile.lock index 9bb77d23330..ba990f5d465 100644 --- a/performance-metrics/Pipfile.lock +++ b/performance-metrics/Pipfile.lock @@ -1,7 +1,7 @@ { "_meta": { "hash": { - "sha256": "a123325c3bebd1451774ebfadc532a4ca78a92897b80cf1d20ded030e145bac2" + "sha256": "fb6f76f0691168cdb9d3d819d1ff10abd55abc805b1abfc40a1ad301df5d51e8" }, "pipfile-spec": 6, "requires": { @@ -18,7 +18,7 @@ "default": { "performance-metrics": { "editable": true, - "file": "." + "path": "." }, "psutil": { "hashes": [ @@ -101,11 +101,11 @@ }, "exceptiongroup": { "hashes": [ - "sha256:5258b9ed329c5bbdd31a309f53cbfb0b155341807f6ff7606a1e801a891b29ad", - "sha256:a4785e48b045528f5bfe627b6ad554ff32def154f42372786903b7abcfe1aa16" + "sha256:3111b9d131c238bec2f8f516e123e14ba243563fb135d3fe885990585aa7795b", + "sha256:47c2edf7c6738fafb49fd34290706d1a1a2f4d1c6df275526b62cbb4aa5393cc" ], "markers": "python_version < '3.11'", - "version": "==1.2.1" + "version": "==1.2.2" }, "flake8": { "hashes": [ @@ -268,12 +268,12 @@ }, "pytest-asyncio": { "hashes": [ - "sha256:009b48127fbe44518a547bddd25611551b0e43ccdbf1e67d12479f569832c20b", - "sha256:5f5c72948f4c49e7db4f29f2521d4031f1c27f86e57b046126654083d4770268" + "sha256:50265d892689a5faefb84df80819d1ecef566eb3549cf915dfb33569359d1ce2", + "sha256:759b10b33a6dc61cce40a8bd5205e302978bbbcc00e279a8b61d9a6a3c82e4d3" ], "index": "pypi", "markers": "python_version >= '3.8'", - "version": "==0.23.7" + "version": "==0.23.8" }, "snowballstemmer": { "hashes": [ diff --git a/robot-server/Pipfile b/robot-server/Pipfile index 03e6b0e5f00..a075e2525c1 100755 --- a/robot-server/Pipfile +++ b/robot-server/Pipfile @@ -64,4 +64,4 @@ opentrons = { editable = true, path = "../api"} opentrons-shared-data = { editable = true, path = "../shared-data/python" } server-utils = {editable = true, path = "./../server-utils"} robot-server = { editable = true, path = "."} -performance-metrics = {file = "../performance-metrics", editable = true} +performance-metrics = {path = "../performance-metrics", editable = true} diff --git a/robot-server/Pipfile.lock b/robot-server/Pipfile.lock index 241deef44d0..0c5f123a179 100644 --- a/robot-server/Pipfile.lock +++ b/robot-server/Pipfile.lock @@ -1,7 +1,7 @@ { "_meta": { "hash": { - "sha256": "c4866d66561f1c6c1281d5d1ae5579719441610fb1d00d898575a22ce6e82b87" + "sha256": "3d4f103c2b5d34fbfdc8d2138e8c9c39c7ff99bb2070e83fec5b662c34ae3360" }, "pipfile-spec": 6, "requires": { @@ -560,7 +560,7 @@ }, "performance-metrics": { "editable": true, - "file": "../performance-metrics" + "path": "../performance-metrics" }, "psutil": { "hashes": [ From 317acc69d62bc43c927c20c65589f25ca48bb234 Mon Sep 17 00:00:00 2001 From: Derek Maggio Date: Thu, 25 Jul 2024 10:53:42 -0700 Subject: [PATCH 7/8] formatting --- performance-metrics/setup.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/performance-metrics/setup.py b/performance-metrics/setup.py index 081346a6103..60e03d5f989 100755 --- a/performance-metrics/setup.py +++ b/performance-metrics/setup.py @@ -55,7 +55,7 @@ def get_version(): PACKAGES = find_packages(where="src", exclude=["tests.*", "tests"]) INSTALL_REQUIRES = [ "psutil==6.0.0; sys_platform=='linux'", - "systemd-python==234; sys_platform=='linux'" + "systemd-python==234; sys_platform=='linux'", ] From bf68b9883f49a8bb0b22c2ecb74f68639a1d735c Mon Sep 17 00:00:00 2001 From: Derek Maggio Date: Thu, 25 Jul 2024 10:55:01 -0700 Subject: [PATCH 8/8] service is specified in oe-core --- .../system-resource-tracker-dev.service | 19 ------------------- .../system-resource-tracker.service | 17 ----------------- 2 files changed, 36 deletions(-) delete mode 100644 performance-metrics/system-resource-tracker-dev.service delete mode 100644 performance-metrics/system-resource-tracker.service diff --git a/performance-metrics/system-resource-tracker-dev.service b/performance-metrics/system-resource-tracker-dev.service deleted file mode 100644 index 8b4f73c5383..00000000000 --- a/performance-metrics/system-resource-tracker-dev.service +++ /dev/null @@ -1,19 +0,0 @@ -[Unit] -Description=Opentrons System Resource Tracker -After=opentrons-robot-server.service - -[Service] -Type=notify -ExecStart=python3 -m performance_metrics.system_resource_tracker -StateDirectory=system-resource-tracker -Environment=PYTHONPATH=/opt/opentrons-robot-server -Environment=OT_SYSTEM_RESOURCE_TRACKER_ENABLED=true -Environment=OT_SYSTEM_RESOURCE_TRACKER_STORAGE_DIR=/data/performance_metrics_data_dev/ -Environment=OT_SYSTEM_RESOURCE_TRACKER_REFRESH_INTERVAL=5.0 -Environment=OT_SYSTEM_RESOURCE_TRACKER_LOGGING_LEVEL=DEBUG - -Restart=on-failure -RestartSec=10 - -[Install] -WantedBy=multi-user.target \ No newline at end of file diff --git a/performance-metrics/system-resource-tracker.service b/performance-metrics/system-resource-tracker.service deleted file mode 100644 index d8f65424eb5..00000000000 --- a/performance-metrics/system-resource-tracker.service +++ /dev/null @@ -1,17 +0,0 @@ -[Unit] -Description=Opentrons System Resource Tracker -After=opentrons-robot-server.service - -[Service] -Type=notify -ExecStart=python3 -m performance_metrics.system_resource_tracker -StateDirectory=system-resource-tracker -Environment=PYTHONPATH=/opt/opentrons-robot-server -Environment=OT_SYSTEM_RESOURCE_TRACKER_ENABLED=true -Environment=OT_SYSTEM_RESOURCE_TRACKER_REFRESH_INTERVAL=15.0 - -Restart=no -TimeoutSec=10s - -[Install] -WantedBy=multi-user.target \ No newline at end of file