From 1e77c79e8a7de0cba1d7103c302882cfaddebc88 Mon Sep 17 00:00:00 2001
From: Benjamin Maier <maier.bn@gmail.com>
Date: Mon, 8 Jan 2018 10:31:27 +1300
Subject: [PATCH] Adapt examples to cmake build system.

---
 .../LEVEL_3/100k/CMakeLists.txt               |   35 +
 .../LEVEL_3/100k/Fortran/CMakeLists.txt       |   60 +
 .../100k/{ => Fortran}/src/100kExample.f90    |    0
 .../LEVEL_3/100k/OpenCMISS.cmake              |   95 ++
 .../LEVEL_3/100k/build_debug/build.sh         |    2 +
 .../LEVEL_3/10k/CMakeLists.txt                |   35 +
 .../LEVEL_3/10k/Fortran/CMakeLists.txt        |   60 +
 .../10k/{ => Fortran}/src/10kExample.f90      |    0
 .../LEVEL_3/10k/OpenCMISS.cmake               |   95 ++
 .../LEVEL_3/10k/build_debug/build.sh          |    2 +
 .../LEVEL_3/1k/CMakeLists.txt                 |   35 +
 .../LEVEL_3/1k/Fortran/CMakeLists.txt         |   60 +
 .../1k/{ => Fortran}/src/1kExample.f90        |    0
 .../LEVEL_3/1k/OpenCMISS.cmake                |   95 ++
 .../LEVEL_3/1k/build_debug/build.sh           |    2 +
 .../LEVEL_2/CMakeLists.txt                    |   35 +
 .../LEVEL_2/Fortran/CMakeLists.txt            |   60 +
 .../{ => Fortran}/src/LEVEL_2Example.f90      |    0
 .../LEVEL_2/OpenCMISS.cmake                   |   95 ++
 .../LEVEL_2/build_debug/build.sh              |    2 +
 .../LEVEL_2/CMakeLists.txt                    |   35 +
 .../LEVEL_2/Fortran/CMakeLists.txt            |   60 +
 .../{ => Fortran}/src/LEVEL_2Example.f90      |    0
 .../LEVEL_2/OpenCMISS.cmake                   |   95 ++
 .../LEVEL_2/build_debug/build.sh              |    2 +
 .../LEVEL_2/CMakeLists.txt                    |   35 +
 .../LEVEL_2/Fortran/CMakeLists.txt            |   60 +
 .../{ => Fortran}/src/LEVEL_2Example.f90      |    0
 .../LEVEL_2/OpenCMISS.cmake                   |   95 ++
 .../LEVEL_2/build_debug/build.sh              |    2 +
 .../LEVEL_2/CMakeLists.txt                    |   35 +
 .../LEVEL_2/Fortran/CMakeLists.txt            |   60 +
 .../{ => Fortran}/src/LEVEL_2Example.f90      |    0
 .../LEVEL_2/OpenCMISS.cmake                   |   95 ++
 .../LEVEL_2/build_debug/build.sh              |    2 +
 .../LEVEL_2/CMakeLists.txt                    |   35 +
 .../LEVEL_2/Fortran/CMakeLists.txt            |   60 +
 .../{ => Fortran}/src/LEVEL_2Example.f90      |    0
 .../LEVEL_2/OpenCMISS.cmake                   |   95 ++
 .../LEVEL_2/build_debug/build.sh              |    2 +
 .../LEVEL_2/CMakeLists.txt                    |   35 +
 .../LEVEL_2/Fortran/CMakeLists.txt            |   60 +
 .../{ => Fortran}/src/LEVEL_2Example.f90      |    0
 .../LEVEL_2/OpenCMISS.cmake                   |   95 ++
 .../LEVEL_2/build_debug/build.sh              |    2 +
 .../LEVEL_2/CMakeLists.txt                    |   35 +
 .../LEVEL_2/Fortran/CMakeLists.txt            |   60 +
 .../{ => Fortran}/src/LEVEL_2Example.f90      |    0
 .../LEVEL_2/OpenCMISS.cmake                   |   95 ++
 .../LEVEL_2/build_debug/build.sh              |    2 +
 .../LEVEL_2/CMakeLists.txt                    |   35 +
 .../LEVEL_2/Fortran/CMakeLists.txt            |   60 +
 .../{ => Fortran}/src/LEVEL_2Example.f90      |    0
 .../LEVEL_2/OpenCMISS.cmake                   |   95 ++
 .../LEVEL_2/build_debug/build.sh              |    2 +
 .../LEVEL_2/CMakeLists.txt                    |   35 +
 .../LEVEL_2/Fortran/CMakeLists.txt            |   60 +
 .../{ => Fortran}/src/LEVEL_2Example.f90      |    0
 .../LEVEL_2/OpenCMISS.cmake                   |   95 ++
 .../LEVEL_2/build_debug/build.sh              |    2 +
 .../LEVEL_2/CMakeLists.txt                    |   35 +
 .../LEVEL_2/Fortran/CMakeLists.txt            |   60 +
 .../{ => Fortran}/src/LEVEL_2Example.f90      |    0
 .../LEVEL_2/OpenCMISS.cmake                   |   95 ++
 .../LEVEL_2/build_debug/build.sh              |    2 +
 .../LEVEL_2/CMakeLists.txt                    |   35 +
 .../LEVEL_2/Fortran/CMakeLists.txt            |   60 +
 .../{ => Fortran}/src/LEVEL_2Example.f90      |    0
 .../LEVEL_2/OpenCMISS.cmake                   |   95 ++
 .../LEVEL_2/build_debug/build.sh              |    2 +
 .../LEVEL_2/CMakeLists.txt                    |   35 +
 .../LEVEL_2/Fortran/CMakeLists.txt            |   60 +
 .../{ => Fortran}/src/LEVEL_2Example.f90      |    0
 .../LEVEL_2/OpenCMISS.cmake                   |   95 ++
 .../LEVEL_2/build_debug/build.sh              |    2 +
 .../LEVEL_3/100k/CMakeLists.txt               |   35 +
 .../LEVEL_3/100k/Fortran/CMakeLists.txt       |   60 +
 .../100k/{ => Fortran}/src/100kExample.f90    |    0
 .../LEVEL_3/100k/OpenCMISS.cmake              |   95 ++
 .../LEVEL_3/100k/build_debug/build.sh         |    2 +
 .../LEVEL_3/10k/CMakeLists.txt                |   35 +
 .../LEVEL_3/10k/Fortran/CMakeLists.txt        |   60 +
 .../10k/{ => Fortran}/src/10kExample.f90      |    0
 .../LEVEL_3/10k/OpenCMISS.cmake               |   95 ++
 .../LEVEL_3/10k/build_debug/build.sh          |    2 +
 .../LEVEL_3/1k/CMakeLists.txt                 |   35 +
 .../LEVEL_3/1k/Fortran/CMakeLists.txt         |   60 +
 .../1k/{ => Fortran}/src/1kExample.f90        |    0
 .../LEVEL_3/1k/OpenCMISS.cmake                |   95 ++
 .../LEVEL_3/1k/build_debug/build.sh           |    2 +
 Bioelectrics/Bidomain/CMakeLists.txt          |   35 +
 Bioelectrics/Bidomain/Fortran/CMakeLists.txt  |   60 +
 .../{ => Fortran}/src/BidomainExample.f90     |    0
 Bioelectrics/Bidomain/OpenCMISS.cmake         |   95 ++
 Bioelectrics/Bidomain/build_debug/build.sh    |    2 +
 Bioelectrics/Monodomain/CMakeLists.txt        |   35 +
 .../Monodomain/Fortran/CMakeLists.txt         |   60 +
 Bioelectrics/Monodomain/OpenCMISS.cmake       |   95 ++
 Bioelectrics/Monodomain/build_debug/build.sh  |    2 +
 .../MonodomainBuenoOrovio/CMakeLists.txt      |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/MonodomainBuenoOrovioExample.f90      |    0
 .../MonodomainBuenoOrovio/OpenCMISS.cmake     |   95 ++
 .../build_debug/build.sh                      |    2 +
 Bioelectrics/MonodomainCUDA/CMakeLists.txt    |   35 +
 .../MonodomainCUDA/Fortran/CMakeLists.txt     |   60 +
 .../src/MonodomainCUDAExample.f90             |    0
 Bioelectrics/MonodomainCUDA/OpenCMISS.cmake   |   95 ++
 .../MonodomainCUDA/build_debug/build.sh       |    2 +
 Bioelectrics/MonodomainTP06/CMakeLists.txt    |   35 +
 .../MonodomainTP06/Fortran/CMakeLists.txt     |   60 +
 .../src/MonodomainTP06Example.f90             |    0
 Bioelectrics/MonodomainTP06/OpenCMISS.cmake   |   95 ++
 .../MonodomainTP06/build_debug/build.sh       |    2 +
 .../Monodomain_Shiqiang/CMakeLists.txt        |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/Monodomain_ShiqiangExample.f90        |    0
 .../Monodomain_Shiqiang/OpenCMISS.cmake       |   95 ++
 .../Monodomain_Shiqiang/build_debug/build.sh  |    2 +
 .../AdvectionDiffusionIO/CMakeLists.txt       |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/AdvectionDiffusionIOExample.f90       |    0
 .../AdvectionDiffusionIO/OpenCMISS.cmake      |   95 ++
 .../AdvectionDiffusionIO/build_debug/build.sh |    2 +
 .../AdvectionDiffusionIO_ALE/CMakeLists.txt   |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/AdvectionDiffusionIO_ALEExample.f90   |    0
 .../AdvectionDiffusionIO_ALE/OpenCMISS.cmake  |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../AdvectionDiffusionIO_BCs/CMakeLists.txt   |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/AdvectionDiffusionIO_BCsExample.f90   |    0
 .../AdvectionDiffusionIO_BCs/OpenCMISS.cmake  |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../StaticAdvectionDiffusion/CMakeLists.txt   |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/StaticAdvectionDiffusionExample.f90   |    0
 .../StaticAdvectionDiffusion/OpenCMISS.cmake  |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../CMakeLists.txt                            |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../StaticAdvectionDiffusionSUPGExample.f90   |    0
 .../OpenCMISS.cmake                           |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../CMakeLists.txt                            |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 ...taticAdvectionDiffusion_FieldMLExample.f90 |    0
 .../OpenCMISS.cmake                           |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../Analytic1DDiffusion/CMakeLists.txt        |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/Analytic1DDiffusionExample.f90        |    0
 .../Analytic1DDiffusion/OpenCMISS.cmake       |   95 ++
 .../Analytic1DDiffusion/build_debug/build.sh  |    2 +
 .../CubicConvergenceTest/CMakeLists.txt       |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/CubicConvergenceTestExample.f90       |    0
 .../CubicConvergenceTest/OpenCMISS.cmake      |   95 ++
 .../CubicConvergenceTest/build_debug/build.sh |    2 +
 .../Diffusion/Diffusion/CMakeLists.txt        |   35 +
 .../Diffusion/Fortran/CMakeLists.txt          |   60 +
 .../{ => Fortran}/src/DiffusionExample.f90    |    0
 .../Diffusion/Diffusion/OpenCMISS.cmake       |   95 ++
 .../Diffusion/Diffusion/build_debug/build.sh  |    2 +
 .../DiffusionConstantSource/CMakeLists.txt    |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/DiffusionConstantSourceExample.f90    |    0
 .../DiffusionConstantSource/OpenCMISS.cmake   |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../DiffusionExponentialSource/CMakeLists.txt |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/DiffusionExponentialSourceExample.f90 |    0
 .../OpenCMISS.cmake                           |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../Diffusion/DiffusionIO_ALE/CMakeLists.txt  |   35 +
 .../DiffusionIO_ALE/Fortran/CMakeLists.txt    |   60 +
 .../src/DiffusionIO_ALEExample.f90            |    0
 .../Diffusion/DiffusionIO_ALE/OpenCMISS.cmake |   95 ++
 .../DiffusionIO_ALE/build_debug/build.sh      |    2 +
 .../DiffusionLinearSource/CMakeLists.txt      |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/DiffusionLinearSourceExample.f90      |    0
 .../DiffusionLinearSource/OpenCMISS.cmake     |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../DiffusionQuadraticSource/CMakeLists.txt   |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/DiffusionQuadraticSourceExample.f90   |    0
 .../DiffusionQuadraticSource/OpenCMISS.cmake  |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../LinearConvergenceTest/CMakeLists.txt      |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/LinearConvergenceTestExample.f90      |    0
 .../LinearConvergenceTest/OpenCMISS.cmake     |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../QuadraticConvergenceTest/CMakeLists.txt   |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/QuadraticConvergenceTestExample.f90   |    0
 .../QuadraticConvergenceTest/OpenCMISS.cmake  |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../GeodesicEx1/CMakeLists.txt                |   35 +
 .../GeodesicEx1/Fortran/CMakeLists.txt        |   60 +
 .../{ => Fortran}/src/GeodesicEx1.ele         |    0
 .../{ => Fortran}/src/GeodesicEx1.node        |    0
 .../{ => Fortran}/src/GeodesicEx1Example.f90  |    0
 .../GeodesicEx1/OpenCMISS.cmake               |   95 ++
 .../GeodesicEx1/build_debug/build.sh          |    2 +
 .../Hamilton_Jacobi/TwoElmnTet/CMakeLists.txt |   35 +
 .../TwoElmnTet/Fortran/CMakeLists.txt         |   60 +
 .../{ => Fortran}/src/TwoElmnTet.cond         |    0
 .../{ => Fortran}/src/TwoElmnTet.ele          |    0
 .../{ => Fortran}/src/TwoElmnTet.estm         |    0
 .../{ => Fortran}/src/TwoElmnTet.fiber        |    0
 .../{ => Fortran}/src/TwoElmnTet.node         |    0
 .../{ => Fortran}/src/TwoElmnTetExample.f90   |    0
 .../TwoElmnTet/OpenCMISS.cmake                |   95 ++
 .../TwoElmnTet/build_debug/build.sh           |    2 +
 .../AnalyticHelmholtz/CMakeLists.txt          |   35 +
 .../AnalyticHelmholtz/Fortran/CMakeLists.txt  |   60 +
 .../src/AnalyticHelmholtzExample.f90          |    0
 .../AnalyticHelmholtz/OpenCMISS.cmake         |   95 ++
 .../AnalyticHelmholtz/build_debug/build.sh    |    2 +
 .../Helmholtz/Helmholtz/CMakeLists.txt        |   35 +
 .../Helmholtz/Fortran/CMakeLists.txt          |   60 +
 .../{ => Fortran}/src/HelmholtzExample.f90    |    0
 .../Helmholtz/Helmholtz/OpenCMISS.cmake       |   95 ++
 .../Helmholtz/Helmholtz/build_debug/build.sh  |    2 +
 .../Laplace/42Master/CMakeLists.txt           |   35 +
 .../Laplace/42Master/Fortran/CMakeLists.txt   |   60 +
 .../{ => Fortran}/src/42MasterExample.f90     |    0
 .../Laplace/42Master/OpenCMISS.cmake          |   95 ++
 .../Laplace/42Master/build_debug/build.sh     |    2 +
 .../Laplace/AnalyticLaplace/CMakeLists.txt    |   35 +
 .../AnalyticLaplace/Fortran/CMakeLists.txt    |   60 +
 .../src/AnalyticLaplaceExample.f90            |    0
 .../Laplace/AnalyticLaplace/OpenCMISS.cmake   |   95 ++
 .../AnalyticLaplace/build_debug/build.sh      |    2 +
 .../Laplace/Embedded1DLaplace/CMakeLists.txt  |   35 +
 .../Embedded1DLaplace/Fortran/CMakeLists.txt  |   60 +
 .../src/Embedded1DLaplaceExample.f90          |    0
 .../Laplace/Embedded1DLaplace/OpenCMISS.cmake |   95 ++
 .../Embedded1DLaplace/build_debug/build.sh    |    2 +
 .../Laplace/Embedded2DLaplace/CMakeLists.txt  |   35 +
 .../Embedded2DLaplace/Fortran/CMakeLists.txt  |   60 +
 .../src/Embedded2DLaplaceExample.f90          |    0
 .../Laplace/Embedded2DLaplace/OpenCMISS.cmake |   95 ++
 .../Embedded2DLaplace/build_debug/build.sh    |    2 +
 .../Laplace/GeneralisedLaplace/CMakeLists.txt |   35 +
 .../GeneralisedLaplace/Fortran/CMakeLists.txt |   60 +
 .../GeneralisedLaplace/OpenCMISS.cmake        |   95 ++
 .../GeneralisedLaplace/build_debug/build.sh   |    2 +
 .../Laplace/Laplace/C/CMakeLists.txt          |   35 +
 .../Laplace/Laplace/C/Fortran/CMakeLists.txt  |   60 +
 .../Laplace/C/{ => Fortran}/src/CExample.c    |    0
 .../Laplace/Laplace/C/OpenCMISS.cmake         |   95 ++
 .../Laplace/Laplace/C/build_debug/build.sh    |    2 +
 ClassicalField/Laplace/Laplace/CMakeLists.txt |   35 +
 .../Laplace/Laplace/Fortran/CMakeLists.txt    |   60 +
 .../Laplace/Laplace/OpenCMISS.cmake           |   95 ++
 .../Laplace/Laplace/build_debug/build.sh      |    2 +
 .../Laplace/LaplaceEllipsoid/CMakeLists.txt   |   35 +
 .../LaplaceEllipsoid/Fortran/CMakeLists.txt   |   60 +
 .../src/LaplaceEllipsoidExample.f90           |    0
 .../Laplace/LaplaceEllipsoid/OpenCMISS.cmake  |   95 ++
 .../LaplaceEllipsoid/build_debug/build.sh     |    2 +
 .../LaplaceEllipsoid_FieldML/CMakeLists.txt   |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/LaplaceEllipsoid_FieldMLExample.f90   |    0
 .../LaplaceEllipsoid_FieldML/OpenCMISS.cmake  |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../Laplace/NumberLaplace/CMakeLists.txt      |   35 +
 .../NumberLaplace/Fortran/CMakeLists.txt      |   60 +
 .../src/NumberLaplaceExample.f90              |    0
 .../Laplace/NumberLaplace/OpenCMISS.cmake     |   95 ++
 .../NumberLaplace/build_debug/build.sh        |    2 +
 .../Laplace/ParallelLaplace/CMakeLists.txt    |   35 +
 .../ParallelLaplace/Fortran/CMakeLists.txt    |   60 +
 .../src/ParallelLaplaceExample.f90            |    0
 .../Laplace/ParallelLaplace/OpenCMISS.cmake   |   95 ++
 .../ParallelLaplace/build_debug/build.sh      |    2 +
 .../SimplexLaplace/Linear/CMakeLists.txt      |   35 +
 .../Linear/Fortran/CMakeLists.txt             |   60 +
 .../{ => Fortran}/src/LinearExample.f90       |    0
 .../SimplexLaplace/Linear/OpenCMISS.cmake     |   95 ++
 .../Linear/build_debug/build.sh               |    2 +
 .../Poisson/42Master/CMakeLists.txt           |   35 +
 .../Poisson/42Master/Fortran/CMakeLists.txt   |   60 +
 .../{ => Fortran}/src/42MasterExample.f90     |    0
 .../Poisson/42Master/OpenCMISS.cmake          |   95 ++
 .../Poisson/42Master/build_debug/build.sh     |    2 +
 .../AnalyticNonlinearPoisson/CMakeLists.txt   |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/AnalyticNonlinearPoissonExample.f90   |    0
 .../AnalyticNonlinearPoisson/OpenCMISS.cmake  |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../ExtracellularBidomain/CMakeLists.txt      |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../ExtracellularBidomain/OpenCMISS.cmake     |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../Poisson/NonlinearPoisson/CMakeLists.txt   |   35 +
 .../NonlinearPoisson/Fortran/CMakeLists.txt   |   60 +
 .../src/NonlinearPoissonExample.f90           |    0
 .../Poisson/NonlinearPoisson/OpenCMISS.cmake  |   95 ++
 .../NonlinearPoisson/build_debug/build.sh     |    2 +
 .../CMakeLists.txt                            |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../CellMLSplitReactionDiffusion1DExample.f90 |    0
 .../OpenCMISS.cmake                           |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../CMakeLists.txt                            |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 ...actionDiffusionConstantSource1DExample.f90 |    0
 .../OpenCMISS.cmake                           |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../CMakeLists.txt                            |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../ReactionDiffusionNoSource1DExample.f90    |    0
 .../OpenCMISS.cmake                           |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../CMakeLists.txt                            |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/data_assimilation_test01.cpp          |    0
 .../OpenCMISS.cmake                           |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../CMakeLists.txt                            |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 ...taAssimilationInflationGuccioneExample.f90 |    0
 .../OpenCMISS.cmake                           |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../CMakeLists.txt                            |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/UniAxialExtensionExample.f90          |    0
 .../src/data_assimilation_uniextension.cpp    |    0
 ...similation_uniextension_OpenCMISS_test.cpp |    0
 .../OpenCMISS.cmake                           |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../1DRectangularCartesian/CMakeLists.txt     |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/1DRectangularCartesianExample.f90     |    0
 .../1DRectangularCartesian/OpenCMISS.cmake    |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../2DRectangularCartesian/CMakeLists.txt     |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/2DRectangularCartesianExample.f90     |    0
 .../2DRectangularCartesian/OpenCMISS.cmake    |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../3DRectangularCartesian/CMakeLists.txt     |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/3DRectangularCartesianExample.f90     |    0
 .../3DRectangularCartesian/OpenCMISS.cmake    |   95 ++
 .../build_debug/build.sh                      |    2 +
 EmbeddedMesh/EmbeddedMeshBasic/CMakeLists.txt |   35 +
 .../EmbeddedMeshBasic/Fortran/CMakeLists.txt  |   60 +
 .../src/EmbeddedMeshBasicExample.f90          |    0
 .../EmbeddedMeshBasic/OpenCMISS.cmake         |   95 ++
 .../EmbeddedMeshBasic/build_debug/build.sh    |    2 +
 .../EmbeddedMeshBasicWithMap/CMakeLists.txt   |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/EmbeddedMeshBasicWithMapExample.f90   |    0
 .../EmbeddedMeshBasicWithMap/OpenCMISS.cmake  |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../ActiveContraction/CMakeLists.txt          |   35 +
 .../ActiveContraction/Fortran/CMakeLists.txt  |   60 +
 .../src/ActiveContractionExample.f90          |    0
 .../ActiveContraction/OpenCMISS.cmake         |   95 ++
 .../ActiveContraction/build_debug/build.sh    |    2 +
 FiniteElasticity/Cantilever/CMakeLists.txt    |   35 +
 .../Cantilever/Fortran/CMakeLists.txt         |   60 +
 FiniteElasticity/Cantilever/OpenCMISS.cmake   |   95 ++
 .../Cantilever/build_debug/build.sh           |    2 +
 FiniteElasticity/CuboidGeneric/CMakeLists.txt |   35 +
 .../CuboidGeneric/Fortran/CMakeLists.txt      |   60 +
 .../src/CuboidGenericExample.f90              |    0
 .../CuboidGeneric/OpenCMISS.cmake             |   95 ++
 .../CuboidGeneric/build_debug/build.sh        |    2 +
 .../CylinderInflation/CMakeLists.txt          |   35 +
 .../CylinderInflation/Fortran/CMakeLists.txt  |   60 +
 .../src/CylinderInflationExample.f90          |    0
 .../CylinderInflation/OpenCMISS.cmake         |   95 ++
 .../CylinderInflation/build_debug/build.sh    |    2 +
 .../LargeUniAxialExtension/CMakeLists.txt     |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../LargeUniAxialExtension/OpenCMISS.cmake    |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../MembraneExtension2DSpace/CMakeLists.txt   |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/MembraneExtension2DSpaceExample.f90   |    0
 .../MembraneExtension2DSpace/OpenCMISS.cmake  |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../CMakeLists.txt                            |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../MembraneExtension3DSpaceFlatExample.f90   |    0
 .../OpenCMISS.cmake                           |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../CMakeLists.txt                            |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../MembraneExtension3DSpaceTiltedExample.f90 |    0
 .../OpenCMISS.cmake                           |   95 ++
 .../build_debug/build.sh                      |    2 +
 .../MixedBoundaryConditions/CMakeLists.txt    |   35 +
 .../Fortran/CMakeLists.txt                    |   60 +
 .../src/MixedBoundaryConditionsExample.f90    |    0
 .../MixedBoundaryConditions/OpenCMISS.cmake   |   95 ++
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 ...essibleElasticityDrivenDarcyIO3Example.f90 |    0
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 ...lasticityDrivenMultiCompDarcyIOExample.f90 |    0
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 ...icEllipsoidDrivenMultiCompDarcyExample.f90 |    0
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 ...ield-manipulation-direct-accessExample.f90 |    0
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 rename MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/{ => Fortran}/src/IncompressibleElasticityDrivenDarcyIO3Example.f90 (100%)
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/OpenCMISS.cmake
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/build_debug/build.sh
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/CMakeLists.txt
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/Fortran/CMakeLists.txt
 rename MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/{ => Fortran}/src/IncompressibleElasticityDrivenDarcyMatSolveExample.f90 (100%)
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/OpenCMISS.cmake
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/build_debug/build.sh
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/CMakeLists.txt
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/Fortran/CMakeLists.txt
 rename MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/{ => Fortran}/src/IncompressibleElasticityDrivenMultiCompDarcyExample.f90 (100%)
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/OpenCMISS.cmake
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/build_debug/build.sh
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/CMakeLists.txt
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/Fortran/CMakeLists.txt
 rename MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/{ => Fortran}/src/IncompressibleElasticityDrivenMultiCompDarcyIOExample.f90 (100%)
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/OpenCMISS.cmake
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/build_debug/build.sh
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/CMakeLists.txt
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/Fortran/CMakeLists.txt
 rename MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/{ => Fortran}/src/InriaModelExample.f90 (100%)
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/OpenCMISS.cmake
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/build_debug/build.sh
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/CMakeLists.txt
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/Fortran/CMakeLists.txt
 rename MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/{ => Fortran}/src/QuadraticEllipsoidDrivenDarcyExample.f90 (100%)
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/OpenCMISS.cmake
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/build_debug/build.sh
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/CMakeLists.txt
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/Fortran/CMakeLists.txt
 rename MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/{ => Fortran}/src/QuadraticEllipsoidDrivenMultiCompDarcyExample.f90 (100%)
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/OpenCMISS.cmake
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/build_debug/build.sh
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/CMakeLists.txt
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/Fortran/CMakeLists.txt
 rename MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/{ => Fortran}/src/SameRegionSameMeshExample.f90 (100%)
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/OpenCMISS.cmake
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/build_debug/build.sh
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/CMakeLists.txt
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/Fortran/CMakeLists.txt
 rename MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/{ => Fortran}/src/CantileverExample.f90 (100%)
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/OpenCMISS.cmake
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/build_debug/build.sh
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/CMakeLists.txt
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/Fortran/CMakeLists.txt
 rename MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/{ => Fortran}/src/StaticExtensionExample.f90 (100%)
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/OpenCMISS.cmake
 create mode 100644 MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/build_debug/build.sh
 create mode 100644 TwoRegions/CMakeLists.txt
 create mode 100644 TwoRegions/Fortran/CMakeLists.txt
 rename TwoRegions/{ => Fortran}/src/TwoRegionsExample.f90 (100%)
 create mode 100644 TwoRegions/OpenCMISS.cmake
 create mode 100644 TwoRegions/build_debug/build.sh
 create mode 100644 cellml/CMakeLists.txt
 create mode 100644 cellml/Fortran/CMakeLists.txt
 create mode 100644 cellml/OpenCMISS.cmake
 create mode 100644 cellml/build_debug/build.sh
 create mode 100644 cellml/model-integration/CMakeLists.txt
 create mode 100644 cellml/model-integration/Fortran/CMakeLists.txt
 create mode 100644 cellml/model-integration/OpenCMISS.cmake
 create mode 100644 cellml/model-integration/build_debug/build.sh
 create mode 100644 define-geometry-and-export/CMakeLists.txt
 create mode 100644 define-geometry-and-export/Fortran/CMakeLists.txt
 rename define-geometry-and-export/{ => Fortran}/src/define-geometry-and-exportExample.f90 (100%)
 create mode 100644 define-geometry-and-export/OpenCMISS.cmake
 create mode 100644 define-geometry-and-export/build_debug/build.sh
 create mode 100755 scripts/create_cmakefiles.py
 create mode 100644 scripts/resources/CMakeLists-1.txt
 create mode 100644 scripts/resources/OpenCMISS.cmake
 create mode 100755 scripts/resources/build.sh
 create mode 100644 simple-field-manipulation-direct-access/CMakeLists.txt
 create mode 100644 simple-field-manipulation-direct-access/Fortran/CMakeLists.txt
 rename simple-field-manipulation-direct-access/{ => Fortran}/src/simple-field-manipulation-direct-accessExample.f90 (100%)
 create mode 100644 simple-field-manipulation-direct-access/OpenCMISS.cmake
 create mode 100644 simple-field-manipulation-direct-access/build_debug/build.sh

diff --git a/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/CMakeLists.txt b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..807ede3e
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(100k  src/100kExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(100k PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(100k PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_100k COMMAND 100k)
+add_opencmiss_environment(test_100k)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/src/100kExample.f90 b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/Fortran/src/100kExample.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/src/100kExample.f90
rename to 42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/Fortran/src/100kExample.f90
diff --git a/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/build_debug/build.sh b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/CMakeLists.txt b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..f07a9d89
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(10k  src/10kExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(10k PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(10k PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_10k COMMAND 10k)
+add_opencmiss_environment(test_10k)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/src/10kExample.f90 b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/Fortran/src/10kExample.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/src/10kExample.f90
rename to 42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/Fortran/src/10kExample.f90
diff --git a/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/build_debug/build.sh b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/CMakeLists.txt b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..4b3dc8ce
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(1k  src/1kExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(1k PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(1k PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_1k COMMAND 1k)
+add_opencmiss_environment(test_1k)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/src/1kExample.f90 b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/Fortran/src/1kExample.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/src/1kExample.f90
rename to 42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/Fortran/src/1kExample.f90
diff --git a/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/build_debug/build.sh b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/LinearProblems/StaticProblems/Stokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityLinearPressure/LEVEL_2/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityLinearPressure/LEVEL_2/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityLinearPressure/LEVEL_2/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..1a8325a2
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LEVEL_2  src/LEVEL_2Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LEVEL_2 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LEVEL_2 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LEVEL_2 COMMAND LEVEL_2)
+add_opencmiss_environment(test_LEVEL_2)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityLinearPressure/LEVEL_2/src/LEVEL_2Example.f90 b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityLinearPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityLinearPressure/LEVEL_2/src/LEVEL_2Example.f90
rename to 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityLinearPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityLinearPressure/LEVEL_2/build_debug/build.sh b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityLinearPressure/LEVEL_2/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityLinearPressure/LEVEL_2/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityQuadraticPressure/LEVEL_2/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityQuadraticPressure/LEVEL_2/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityQuadraticPressure/LEVEL_2/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..1a8325a2
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LEVEL_2  src/LEVEL_2Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LEVEL_2 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LEVEL_2 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LEVEL_2 COMMAND LEVEL_2)
+add_opencmiss_environment(test_LEVEL_2)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityQuadraticPressure/LEVEL_2/src/LEVEL_2Example.f90 b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityQuadraticPressure/LEVEL_2/src/LEVEL_2Example.f90
rename to 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityQuadraticPressure/LEVEL_2/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityQuadraticPressure/LEVEL_2/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityQuadraticPressure/LEVEL_2/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityQuadraticPressure/LEVEL_2/build_debug/build.sh b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityQuadraticPressure/LEVEL_2/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/CubicVelocityQuadraticPressure/LEVEL_2/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/QuadraticVelocityLinearPressure/LEVEL_2/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/QuadraticVelocityLinearPressure/LEVEL_2/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/QuadraticVelocityLinearPressure/LEVEL_2/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..1a8325a2
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LEVEL_2  src/LEVEL_2Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LEVEL_2 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LEVEL_2 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LEVEL_2 COMMAND LEVEL_2)
+add_opencmiss_environment(test_LEVEL_2)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/QuadraticVelocityLinearPressure/LEVEL_2/src/LEVEL_2Example.f90 b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/QuadraticVelocityLinearPressure/LEVEL_2/src/LEVEL_2Example.f90
rename to 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/QuadraticVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/QuadraticVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/QuadraticVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/QuadraticVelocityLinearPressure/LEVEL_2/build_debug/build.sh b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/QuadraticVelocityLinearPressure/LEVEL_2/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/QUAD/QuadraticVelocityLinearPressure/LEVEL_2/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityLinearPressure/LEVEL_2/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityLinearPressure/LEVEL_2/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityLinearPressure/LEVEL_2/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..1a8325a2
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LEVEL_2  src/LEVEL_2Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LEVEL_2 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LEVEL_2 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LEVEL_2 COMMAND LEVEL_2)
+add_opencmiss_environment(test_LEVEL_2)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityLinearPressure/LEVEL_2/src/LEVEL_2Example.f90 b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityLinearPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityLinearPressure/LEVEL_2/src/LEVEL_2Example.f90
rename to 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityLinearPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityLinearPressure/LEVEL_2/build_debug/build.sh b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityLinearPressure/LEVEL_2/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityLinearPressure/LEVEL_2/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityQuadraticPressure/LEVEL_2/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityQuadraticPressure/LEVEL_2/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityQuadraticPressure/LEVEL_2/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..1a8325a2
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LEVEL_2  src/LEVEL_2Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LEVEL_2 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LEVEL_2 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LEVEL_2 COMMAND LEVEL_2)
+add_opencmiss_environment(test_LEVEL_2)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityQuadraticPressure/LEVEL_2/src/LEVEL_2Example.f90 b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityQuadraticPressure/LEVEL_2/src/LEVEL_2Example.f90
rename to 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityQuadraticPressure/LEVEL_2/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityQuadraticPressure/LEVEL_2/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityQuadraticPressure/LEVEL_2/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityQuadraticPressure/LEVEL_2/build_debug/build.sh b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityQuadraticPressure/LEVEL_2/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/CubicVelocityQuadraticPressure/LEVEL_2/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/QuadraticVelocityLinearPressure/LEVEL_2/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/QuadraticVelocityLinearPressure/LEVEL_2/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/QuadraticVelocityLinearPressure/LEVEL_2/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..1a8325a2
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LEVEL_2  src/LEVEL_2Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LEVEL_2 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LEVEL_2 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LEVEL_2 COMMAND LEVEL_2)
+add_opencmiss_environment(test_LEVEL_2)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/QuadraticVelocityLinearPressure/LEVEL_2/src/LEVEL_2Example.f90 b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/QuadraticVelocityLinearPressure/LEVEL_2/src/LEVEL_2Example.f90
rename to 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/QuadraticVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/QuadraticVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/QuadraticVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/QuadraticVelocityLinearPressure/LEVEL_2/build_debug/build.sh b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/QuadraticVelocityLinearPressure/LEVEL_2/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/2D/TRI/QuadraticVelocityLinearPressure/LEVEL_2/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityLinearPressure/LEVEL_2/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityLinearPressure/LEVEL_2/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityLinearPressure/LEVEL_2/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..1a8325a2
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LEVEL_2  src/LEVEL_2Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LEVEL_2 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LEVEL_2 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LEVEL_2 COMMAND LEVEL_2)
+add_opencmiss_environment(test_LEVEL_2)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityLinearPressure/LEVEL_2/src/LEVEL_2Example.f90 b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityLinearPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityLinearPressure/LEVEL_2/src/LEVEL_2Example.f90
rename to 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityLinearPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityLinearPressure/LEVEL_2/build_debug/build.sh b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityLinearPressure/LEVEL_2/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityLinearPressure/LEVEL_2/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityQuadraticPressure/LEVEL_2/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityQuadraticPressure/LEVEL_2/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityQuadraticPressure/LEVEL_2/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..1a8325a2
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LEVEL_2  src/LEVEL_2Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LEVEL_2 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LEVEL_2 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LEVEL_2 COMMAND LEVEL_2)
+add_opencmiss_environment(test_LEVEL_2)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityQuadraticPressure/LEVEL_2/src/LEVEL_2Example.f90 b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityQuadraticPressure/LEVEL_2/src/LEVEL_2Example.f90
rename to 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityQuadraticPressure/LEVEL_2/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityQuadraticPressure/LEVEL_2/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityQuadraticPressure/LEVEL_2/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityQuadraticPressure/LEVEL_2/build_debug/build.sh b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityQuadraticPressure/LEVEL_2/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/CubicVelocityQuadraticPressure/LEVEL_2/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_2/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_2/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_2/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..1a8325a2
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LEVEL_2  src/LEVEL_2Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LEVEL_2 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LEVEL_2 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LEVEL_2 COMMAND LEVEL_2)
+add_opencmiss_environment(test_LEVEL_2)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_2/src/LEVEL_2Example.f90 b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_2/src/LEVEL_2Example.f90
rename to 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_2/build_debug/build.sh b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_2/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_2/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityLinearPressure/LEVEL_2/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityLinearPressure/LEVEL_2/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityLinearPressure/LEVEL_2/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..1a8325a2
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LEVEL_2  src/LEVEL_2Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LEVEL_2 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LEVEL_2 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LEVEL_2 COMMAND LEVEL_2)
+add_opencmiss_environment(test_LEVEL_2)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityLinearPressure/LEVEL_2/src/LEVEL_2Example.f90 b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityLinearPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityLinearPressure/LEVEL_2/src/LEVEL_2Example.f90
rename to 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityLinearPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityLinearPressure/LEVEL_2/build_debug/build.sh b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityLinearPressure/LEVEL_2/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityLinearPressure/LEVEL_2/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityQuadraticPressure/LEVEL_2/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityQuadraticPressure/LEVEL_2/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityQuadraticPressure/LEVEL_2/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..1a8325a2
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LEVEL_2  src/LEVEL_2Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LEVEL_2 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LEVEL_2 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LEVEL_2 COMMAND LEVEL_2)
+add_opencmiss_environment(test_LEVEL_2)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityQuadraticPressure/LEVEL_2/src/LEVEL_2Example.f90 b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityQuadraticPressure/LEVEL_2/src/LEVEL_2Example.f90
rename to 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityQuadraticPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityQuadraticPressure/LEVEL_2/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityQuadraticPressure/LEVEL_2/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityQuadraticPressure/LEVEL_2/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityQuadraticPressure/LEVEL_2/build_debug/build.sh b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityQuadraticPressure/LEVEL_2/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/CubicVelocityQuadraticPressure/LEVEL_2/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/QuadraticVelocityLinearPressure/LEVEL_2/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/QuadraticVelocityLinearPressure/LEVEL_2/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/QuadraticVelocityLinearPressure/LEVEL_2/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..1a8325a2
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LEVEL_2  src/LEVEL_2Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LEVEL_2 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LEVEL_2 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LEVEL_2 COMMAND LEVEL_2)
+add_opencmiss_environment(test_LEVEL_2)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/QuadraticVelocityLinearPressure/LEVEL_2/src/LEVEL_2Example.f90 b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/QuadraticVelocityLinearPressure/LEVEL_2/src/LEVEL_2Example.f90
rename to 42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/QuadraticVelocityLinearPressure/LEVEL_2/Fortran/src/LEVEL_2Example.f90
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/QuadraticVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/QuadraticVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/QuadraticVelocityLinearPressure/LEVEL_2/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/QuadraticVelocityLinearPressure/LEVEL_2/build_debug/build.sh b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/QuadraticVelocityLinearPressure/LEVEL_2/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/DynamicProblems/NavierStokes/3D/TET/QuadraticVelocityLinearPressure/LEVEL_2/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..807ede3e
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(100k  src/100kExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(100k PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(100k PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_100k COMMAND 100k)
+add_opencmiss_environment(test_100k)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/src/100kExample.f90 b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/Fortran/src/100kExample.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/src/100kExample.f90
rename to 42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/Fortran/src/100kExample.f90
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/build_debug/build.sh b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/100k/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..f07a9d89
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(10k  src/10kExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(10k PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(10k PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_10k COMMAND 10k)
+add_opencmiss_environment(test_10k)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/src/10kExample.f90 b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/Fortran/src/10kExample.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/src/10kExample.f90
rename to 42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/Fortran/src/10kExample.f90
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/build_debug/build.sh b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/10k/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/Fortran/CMakeLists.txt b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..4b3dc8ce
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(1k  src/1kExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(1k PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(1k PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_1k COMMAND 1k)
+add_opencmiss_environment(test_1k)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/src/1kExample.f90 b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/Fortran/src/1kExample.f90
similarity index 100%
rename from 42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/src/1kExample.f90
rename to 42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/Fortran/src/1kExample.f90
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/OpenCMISS.cmake b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/build_debug/build.sh b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/42TestingPoints/SinglePhysics/NonlinearProblems/StaticProblems/NavierStokes/3D/HEX/QuadraticVelocityLinearPressure/LEVEL_3/1k/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Bioelectrics/Bidomain/CMakeLists.txt b/Bioelectrics/Bidomain/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Bioelectrics/Bidomain/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Bioelectrics/Bidomain/Fortran/CMakeLists.txt b/Bioelectrics/Bidomain/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..c036db49
--- /dev/null
+++ b/Bioelectrics/Bidomain/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Bidomain  src/BidomainExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Bidomain PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Bidomain PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Bidomain COMMAND Bidomain)
+add_opencmiss_environment(test_Bidomain)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Bioelectrics/Bidomain/src/BidomainExample.f90 b/Bioelectrics/Bidomain/Fortran/src/BidomainExample.f90
similarity index 100%
rename from Bioelectrics/Bidomain/src/BidomainExample.f90
rename to Bioelectrics/Bidomain/Fortran/src/BidomainExample.f90
diff --git a/Bioelectrics/Bidomain/OpenCMISS.cmake b/Bioelectrics/Bidomain/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Bioelectrics/Bidomain/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Bioelectrics/Bidomain/build_debug/build.sh b/Bioelectrics/Bidomain/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Bioelectrics/Bidomain/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Bioelectrics/Monodomain/CMakeLists.txt b/Bioelectrics/Monodomain/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Bioelectrics/Monodomain/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Bioelectrics/Monodomain/Fortran/CMakeLists.txt b/Bioelectrics/Monodomain/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..cdcf3c22
--- /dev/null
+++ b/Bioelectrics/Monodomain/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Monodomain  src/FortranExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Monodomain PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Monodomain PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Monodomain COMMAND Monodomain)
+add_opencmiss_environment(test_Monodomain)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Bioelectrics/Monodomain/OpenCMISS.cmake b/Bioelectrics/Monodomain/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Bioelectrics/Monodomain/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Bioelectrics/Monodomain/build_debug/build.sh b/Bioelectrics/Monodomain/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Bioelectrics/Monodomain/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Bioelectrics/MonodomainBuenoOrovio/CMakeLists.txt b/Bioelectrics/MonodomainBuenoOrovio/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Bioelectrics/MonodomainBuenoOrovio/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Bioelectrics/MonodomainBuenoOrovio/Fortran/CMakeLists.txt b/Bioelectrics/MonodomainBuenoOrovio/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..eec7de1b
--- /dev/null
+++ b/Bioelectrics/MonodomainBuenoOrovio/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(MonodomainBuenoOrovio  src/MonodomainBuenoOrovioExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(MonodomainBuenoOrovio PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(MonodomainBuenoOrovio PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_MonodomainBuenoOrovio COMMAND MonodomainBuenoOrovio)
+add_opencmiss_environment(test_MonodomainBuenoOrovio)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Bioelectrics/MonodomainBuenoOrovio/src/MonodomainBuenoOrovioExample.f90 b/Bioelectrics/MonodomainBuenoOrovio/Fortran/src/MonodomainBuenoOrovioExample.f90
similarity index 100%
rename from Bioelectrics/MonodomainBuenoOrovio/src/MonodomainBuenoOrovioExample.f90
rename to Bioelectrics/MonodomainBuenoOrovio/Fortran/src/MonodomainBuenoOrovioExample.f90
diff --git a/Bioelectrics/MonodomainBuenoOrovio/OpenCMISS.cmake b/Bioelectrics/MonodomainBuenoOrovio/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Bioelectrics/MonodomainBuenoOrovio/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Bioelectrics/MonodomainBuenoOrovio/build_debug/build.sh b/Bioelectrics/MonodomainBuenoOrovio/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Bioelectrics/MonodomainBuenoOrovio/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Bioelectrics/MonodomainCUDA/CMakeLists.txt b/Bioelectrics/MonodomainCUDA/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Bioelectrics/MonodomainCUDA/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Bioelectrics/MonodomainCUDA/Fortran/CMakeLists.txt b/Bioelectrics/MonodomainCUDA/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..7e8c3759
--- /dev/null
+++ b/Bioelectrics/MonodomainCUDA/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(MonodomainCUDA  src/MonodomainCUDAExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(MonodomainCUDA PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(MonodomainCUDA PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_MonodomainCUDA COMMAND MonodomainCUDA)
+add_opencmiss_environment(test_MonodomainCUDA)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Bioelectrics/MonodomainCUDA/src/MonodomainCUDAExample.f90 b/Bioelectrics/MonodomainCUDA/Fortran/src/MonodomainCUDAExample.f90
similarity index 100%
rename from Bioelectrics/MonodomainCUDA/src/MonodomainCUDAExample.f90
rename to Bioelectrics/MonodomainCUDA/Fortran/src/MonodomainCUDAExample.f90
diff --git a/Bioelectrics/MonodomainCUDA/OpenCMISS.cmake b/Bioelectrics/MonodomainCUDA/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Bioelectrics/MonodomainCUDA/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Bioelectrics/MonodomainCUDA/build_debug/build.sh b/Bioelectrics/MonodomainCUDA/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Bioelectrics/MonodomainCUDA/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Bioelectrics/MonodomainTP06/CMakeLists.txt b/Bioelectrics/MonodomainTP06/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Bioelectrics/MonodomainTP06/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Bioelectrics/MonodomainTP06/Fortran/CMakeLists.txt b/Bioelectrics/MonodomainTP06/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..c0587c94
--- /dev/null
+++ b/Bioelectrics/MonodomainTP06/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(MonodomainTP06  src/MonodomainTP06Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(MonodomainTP06 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(MonodomainTP06 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_MonodomainTP06 COMMAND MonodomainTP06)
+add_opencmiss_environment(test_MonodomainTP06)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Bioelectrics/MonodomainTP06/src/MonodomainTP06Example.f90 b/Bioelectrics/MonodomainTP06/Fortran/src/MonodomainTP06Example.f90
similarity index 100%
rename from Bioelectrics/MonodomainTP06/src/MonodomainTP06Example.f90
rename to Bioelectrics/MonodomainTP06/Fortran/src/MonodomainTP06Example.f90
diff --git a/Bioelectrics/MonodomainTP06/OpenCMISS.cmake b/Bioelectrics/MonodomainTP06/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Bioelectrics/MonodomainTP06/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Bioelectrics/MonodomainTP06/build_debug/build.sh b/Bioelectrics/MonodomainTP06/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Bioelectrics/MonodomainTP06/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Bioelectrics/Monodomain_Shiqiang/CMakeLists.txt b/Bioelectrics/Monodomain_Shiqiang/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Bioelectrics/Monodomain_Shiqiang/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Bioelectrics/Monodomain_Shiqiang/Fortran/CMakeLists.txt b/Bioelectrics/Monodomain_Shiqiang/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..4ee983a9
--- /dev/null
+++ b/Bioelectrics/Monodomain_Shiqiang/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Monodomain_Shiqiang  src/Monodomain_ShiqiangExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Monodomain_Shiqiang PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Monodomain_Shiqiang PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Monodomain_Shiqiang COMMAND Monodomain_Shiqiang)
+add_opencmiss_environment(test_Monodomain_Shiqiang)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Bioelectrics/Monodomain_Shiqiang/src/Monodomain_ShiqiangExample.f90 b/Bioelectrics/Monodomain_Shiqiang/Fortran/src/Monodomain_ShiqiangExample.f90
similarity index 100%
rename from Bioelectrics/Monodomain_Shiqiang/src/Monodomain_ShiqiangExample.f90
rename to Bioelectrics/Monodomain_Shiqiang/Fortran/src/Monodomain_ShiqiangExample.f90
diff --git a/Bioelectrics/Monodomain_Shiqiang/OpenCMISS.cmake b/Bioelectrics/Monodomain_Shiqiang/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Bioelectrics/Monodomain_Shiqiang/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Bioelectrics/Monodomain_Shiqiang/build_debug/build.sh b/Bioelectrics/Monodomain_Shiqiang/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Bioelectrics/Monodomain_Shiqiang/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO/CMakeLists.txt b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO/Fortran/CMakeLists.txt b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..eb11cbf1
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(AdvectionDiffusionIO  src/AdvectionDiffusionIOExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(AdvectionDiffusionIO PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(AdvectionDiffusionIO PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_AdvectionDiffusionIO COMMAND AdvectionDiffusionIO)
+add_opencmiss_environment(test_AdvectionDiffusionIO)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO/src/AdvectionDiffusionIOExample.f90 b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO/Fortran/src/AdvectionDiffusionIOExample.f90
similarity index 100%
rename from ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO/src/AdvectionDiffusionIOExample.f90
rename to ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO/Fortran/src/AdvectionDiffusionIOExample.f90
diff --git a/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO/OpenCMISS.cmake b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO/build_debug/build.sh b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_ALE/CMakeLists.txt b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_ALE/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_ALE/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_ALE/Fortran/CMakeLists.txt b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_ALE/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..a04371db
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_ALE/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(AdvectionDiffusionIO_ALE  src/AdvectionDiffusionIO_ALEExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(AdvectionDiffusionIO_ALE PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(AdvectionDiffusionIO_ALE PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_AdvectionDiffusionIO_ALE COMMAND AdvectionDiffusionIO_ALE)
+add_opencmiss_environment(test_AdvectionDiffusionIO_ALE)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_ALE/src/AdvectionDiffusionIO_ALEExample.f90 b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_ALE/Fortran/src/AdvectionDiffusionIO_ALEExample.f90
similarity index 100%
rename from ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_ALE/src/AdvectionDiffusionIO_ALEExample.f90
rename to ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_ALE/Fortran/src/AdvectionDiffusionIO_ALEExample.f90
diff --git a/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_ALE/OpenCMISS.cmake b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_ALE/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_ALE/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_ALE/build_debug/build.sh b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_ALE/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_ALE/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_BCs/CMakeLists.txt b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_BCs/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_BCs/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_BCs/Fortran/CMakeLists.txt b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_BCs/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..363a7601
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_BCs/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(AdvectionDiffusionIO_BCs  src/AdvectionDiffusionIO_BCsExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(AdvectionDiffusionIO_BCs PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(AdvectionDiffusionIO_BCs PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_AdvectionDiffusionIO_BCs COMMAND AdvectionDiffusionIO_BCs)
+add_opencmiss_environment(test_AdvectionDiffusionIO_BCs)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_BCs/src/AdvectionDiffusionIO_BCsExample.f90 b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_BCs/Fortran/src/AdvectionDiffusionIO_BCsExample.f90
similarity index 100%
rename from ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_BCs/src/AdvectionDiffusionIO_BCsExample.f90
rename to ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_BCs/Fortran/src/AdvectionDiffusionIO_BCsExample.f90
diff --git a/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_BCs/OpenCMISS.cmake b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_BCs/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_BCs/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_BCs/build_debug/build.sh b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_BCs/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/AdvectionDiffusionIO_BCs/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion/CMakeLists.txt b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion/Fortran/CMakeLists.txt b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..8456f6ce
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(StaticAdvectionDiffusion  src/StaticAdvectionDiffusionExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(StaticAdvectionDiffusion PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(StaticAdvectionDiffusion PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_StaticAdvectionDiffusion COMMAND StaticAdvectionDiffusion)
+add_opencmiss_environment(test_StaticAdvectionDiffusion)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion/src/StaticAdvectionDiffusionExample.f90 b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion/Fortran/src/StaticAdvectionDiffusionExample.f90
similarity index 100%
rename from ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion/src/StaticAdvectionDiffusionExample.f90
rename to ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion/Fortran/src/StaticAdvectionDiffusionExample.f90
diff --git a/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion/OpenCMISS.cmake b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion/build_debug/build.sh b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusionSUPG/CMakeLists.txt b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusionSUPG/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusionSUPG/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusionSUPG/Fortran/CMakeLists.txt b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusionSUPG/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..b7247c3f
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusionSUPG/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(StaticAdvectionDiffusionSUPG  src/StaticAdvectionDiffusionSUPGExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(StaticAdvectionDiffusionSUPG PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(StaticAdvectionDiffusionSUPG PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_StaticAdvectionDiffusionSUPG COMMAND StaticAdvectionDiffusionSUPG)
+add_opencmiss_environment(test_StaticAdvectionDiffusionSUPG)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusionSUPG/src/StaticAdvectionDiffusionSUPGExample.f90 b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusionSUPG/Fortran/src/StaticAdvectionDiffusionSUPGExample.f90
similarity index 100%
rename from ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusionSUPG/src/StaticAdvectionDiffusionSUPGExample.f90
rename to ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusionSUPG/Fortran/src/StaticAdvectionDiffusionSUPGExample.f90
diff --git a/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusionSUPG/OpenCMISS.cmake b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusionSUPG/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusionSUPG/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusionSUPG/build_debug/build.sh b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusionSUPG/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusionSUPG/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion_FieldML/CMakeLists.txt b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion_FieldML/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion_FieldML/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion_FieldML/Fortran/CMakeLists.txt b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion_FieldML/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..1079cd81
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion_FieldML/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(StaticAdvectionDiffusion_FieldML  src/StaticAdvectionDiffusion_FieldMLExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(StaticAdvectionDiffusion_FieldML PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(StaticAdvectionDiffusion_FieldML PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_StaticAdvectionDiffusion_FieldML COMMAND StaticAdvectionDiffusion_FieldML)
+add_opencmiss_environment(test_StaticAdvectionDiffusion_FieldML)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion_FieldML/src/StaticAdvectionDiffusion_FieldMLExample.f90 b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion_FieldML/Fortran/src/StaticAdvectionDiffusion_FieldMLExample.f90
similarity index 100%
rename from ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion_FieldML/src/StaticAdvectionDiffusion_FieldMLExample.f90
rename to ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion_FieldML/Fortran/src/StaticAdvectionDiffusion_FieldMLExample.f90
diff --git a/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion_FieldML/OpenCMISS.cmake b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion_FieldML/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion_FieldML/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion_FieldML/build_debug/build.sh b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion_FieldML/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/AdvectionDiffusion/StaticAdvectionDiffusion_FieldML/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Diffusion/Analytic1DDiffusion/CMakeLists.txt b/ClassicalField/Diffusion/Analytic1DDiffusion/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Diffusion/Analytic1DDiffusion/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Diffusion/Analytic1DDiffusion/Fortran/CMakeLists.txt b/ClassicalField/Diffusion/Analytic1DDiffusion/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..c25b7b0e
--- /dev/null
+++ b/ClassicalField/Diffusion/Analytic1DDiffusion/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Analytic1DDiffusion  src/Analytic1DDiffusionExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Analytic1DDiffusion PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Analytic1DDiffusion PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Analytic1DDiffusion COMMAND Analytic1DDiffusion)
+add_opencmiss_environment(test_Analytic1DDiffusion)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Diffusion/Analytic1DDiffusion/src/Analytic1DDiffusionExample.f90 b/ClassicalField/Diffusion/Analytic1DDiffusion/Fortran/src/Analytic1DDiffusionExample.f90
similarity index 100%
rename from ClassicalField/Diffusion/Analytic1DDiffusion/src/Analytic1DDiffusionExample.f90
rename to ClassicalField/Diffusion/Analytic1DDiffusion/Fortran/src/Analytic1DDiffusionExample.f90
diff --git a/ClassicalField/Diffusion/Analytic1DDiffusion/OpenCMISS.cmake b/ClassicalField/Diffusion/Analytic1DDiffusion/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Diffusion/Analytic1DDiffusion/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Diffusion/Analytic1DDiffusion/build_debug/build.sh b/ClassicalField/Diffusion/Analytic1DDiffusion/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Diffusion/Analytic1DDiffusion/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Diffusion/CubicConvergenceTest/CMakeLists.txt b/ClassicalField/Diffusion/CubicConvergenceTest/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Diffusion/CubicConvergenceTest/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Diffusion/CubicConvergenceTest/Fortran/CMakeLists.txt b/ClassicalField/Diffusion/CubicConvergenceTest/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..f3ed6db8
--- /dev/null
+++ b/ClassicalField/Diffusion/CubicConvergenceTest/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(CubicConvergenceTest  src/CubicConvergenceTestExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(CubicConvergenceTest PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(CubicConvergenceTest PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_CubicConvergenceTest COMMAND CubicConvergenceTest)
+add_opencmiss_environment(test_CubicConvergenceTest)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Diffusion/CubicConvergenceTest/src/CubicConvergenceTestExample.f90 b/ClassicalField/Diffusion/CubicConvergenceTest/Fortran/src/CubicConvergenceTestExample.f90
similarity index 100%
rename from ClassicalField/Diffusion/CubicConvergenceTest/src/CubicConvergenceTestExample.f90
rename to ClassicalField/Diffusion/CubicConvergenceTest/Fortran/src/CubicConvergenceTestExample.f90
diff --git a/ClassicalField/Diffusion/CubicConvergenceTest/OpenCMISS.cmake b/ClassicalField/Diffusion/CubicConvergenceTest/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Diffusion/CubicConvergenceTest/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Diffusion/CubicConvergenceTest/build_debug/build.sh b/ClassicalField/Diffusion/CubicConvergenceTest/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Diffusion/CubicConvergenceTest/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Diffusion/Diffusion/CMakeLists.txt b/ClassicalField/Diffusion/Diffusion/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Diffusion/Diffusion/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Diffusion/Diffusion/Fortran/CMakeLists.txt b/ClassicalField/Diffusion/Diffusion/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..df74638a
--- /dev/null
+++ b/ClassicalField/Diffusion/Diffusion/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Diffusion  src/DiffusionExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Diffusion PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Diffusion PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Diffusion COMMAND Diffusion)
+add_opencmiss_environment(test_Diffusion)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Diffusion/Diffusion/src/DiffusionExample.f90 b/ClassicalField/Diffusion/Diffusion/Fortran/src/DiffusionExample.f90
similarity index 100%
rename from ClassicalField/Diffusion/Diffusion/src/DiffusionExample.f90
rename to ClassicalField/Diffusion/Diffusion/Fortran/src/DiffusionExample.f90
diff --git a/ClassicalField/Diffusion/Diffusion/OpenCMISS.cmake b/ClassicalField/Diffusion/Diffusion/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Diffusion/Diffusion/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Diffusion/Diffusion/build_debug/build.sh b/ClassicalField/Diffusion/Diffusion/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Diffusion/Diffusion/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Diffusion/DiffusionConstantSource/CMakeLists.txt b/ClassicalField/Diffusion/DiffusionConstantSource/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionConstantSource/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Diffusion/DiffusionConstantSource/Fortran/CMakeLists.txt b/ClassicalField/Diffusion/DiffusionConstantSource/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..90d28956
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionConstantSource/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(DiffusionConstantSource  src/DiffusionConstantSourceExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(DiffusionConstantSource PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(DiffusionConstantSource PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_DiffusionConstantSource COMMAND DiffusionConstantSource)
+add_opencmiss_environment(test_DiffusionConstantSource)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Diffusion/DiffusionConstantSource/src/DiffusionConstantSourceExample.f90 b/ClassicalField/Diffusion/DiffusionConstantSource/Fortran/src/DiffusionConstantSourceExample.f90
similarity index 100%
rename from ClassicalField/Diffusion/DiffusionConstantSource/src/DiffusionConstantSourceExample.f90
rename to ClassicalField/Diffusion/DiffusionConstantSource/Fortran/src/DiffusionConstantSourceExample.f90
diff --git a/ClassicalField/Diffusion/DiffusionConstantSource/OpenCMISS.cmake b/ClassicalField/Diffusion/DiffusionConstantSource/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionConstantSource/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Diffusion/DiffusionConstantSource/build_debug/build.sh b/ClassicalField/Diffusion/DiffusionConstantSource/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionConstantSource/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Diffusion/DiffusionExponentialSource/CMakeLists.txt b/ClassicalField/Diffusion/DiffusionExponentialSource/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionExponentialSource/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Diffusion/DiffusionExponentialSource/Fortran/CMakeLists.txt b/ClassicalField/Diffusion/DiffusionExponentialSource/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..4bc39499
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionExponentialSource/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(DiffusionExponentialSource  src/DiffusionExponentialSourceExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(DiffusionExponentialSource PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(DiffusionExponentialSource PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_DiffusionExponentialSource COMMAND DiffusionExponentialSource)
+add_opencmiss_environment(test_DiffusionExponentialSource)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Diffusion/DiffusionExponentialSource/src/DiffusionExponentialSourceExample.f90 b/ClassicalField/Diffusion/DiffusionExponentialSource/Fortran/src/DiffusionExponentialSourceExample.f90
similarity index 100%
rename from ClassicalField/Diffusion/DiffusionExponentialSource/src/DiffusionExponentialSourceExample.f90
rename to ClassicalField/Diffusion/DiffusionExponentialSource/Fortran/src/DiffusionExponentialSourceExample.f90
diff --git a/ClassicalField/Diffusion/DiffusionExponentialSource/OpenCMISS.cmake b/ClassicalField/Diffusion/DiffusionExponentialSource/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionExponentialSource/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Diffusion/DiffusionExponentialSource/build_debug/build.sh b/ClassicalField/Diffusion/DiffusionExponentialSource/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionExponentialSource/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Diffusion/DiffusionIO_ALE/CMakeLists.txt b/ClassicalField/Diffusion/DiffusionIO_ALE/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionIO_ALE/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Diffusion/DiffusionIO_ALE/Fortran/CMakeLists.txt b/ClassicalField/Diffusion/DiffusionIO_ALE/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..0c2691d0
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionIO_ALE/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(DiffusionIO_ALE  src/DiffusionIO_ALEExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(DiffusionIO_ALE PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(DiffusionIO_ALE PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_DiffusionIO_ALE COMMAND DiffusionIO_ALE)
+add_opencmiss_environment(test_DiffusionIO_ALE)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Diffusion/DiffusionIO_ALE/src/DiffusionIO_ALEExample.f90 b/ClassicalField/Diffusion/DiffusionIO_ALE/Fortran/src/DiffusionIO_ALEExample.f90
similarity index 100%
rename from ClassicalField/Diffusion/DiffusionIO_ALE/src/DiffusionIO_ALEExample.f90
rename to ClassicalField/Diffusion/DiffusionIO_ALE/Fortran/src/DiffusionIO_ALEExample.f90
diff --git a/ClassicalField/Diffusion/DiffusionIO_ALE/OpenCMISS.cmake b/ClassicalField/Diffusion/DiffusionIO_ALE/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionIO_ALE/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Diffusion/DiffusionIO_ALE/build_debug/build.sh b/ClassicalField/Diffusion/DiffusionIO_ALE/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionIO_ALE/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Diffusion/DiffusionLinearSource/CMakeLists.txt b/ClassicalField/Diffusion/DiffusionLinearSource/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionLinearSource/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Diffusion/DiffusionLinearSource/Fortran/CMakeLists.txt b/ClassicalField/Diffusion/DiffusionLinearSource/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..4f07318d
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionLinearSource/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(DiffusionLinearSource  src/DiffusionLinearSourceExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(DiffusionLinearSource PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(DiffusionLinearSource PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_DiffusionLinearSource COMMAND DiffusionLinearSource)
+add_opencmiss_environment(test_DiffusionLinearSource)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Diffusion/DiffusionLinearSource/src/DiffusionLinearSourceExample.f90 b/ClassicalField/Diffusion/DiffusionLinearSource/Fortran/src/DiffusionLinearSourceExample.f90
similarity index 100%
rename from ClassicalField/Diffusion/DiffusionLinearSource/src/DiffusionLinearSourceExample.f90
rename to ClassicalField/Diffusion/DiffusionLinearSource/Fortran/src/DiffusionLinearSourceExample.f90
diff --git a/ClassicalField/Diffusion/DiffusionLinearSource/OpenCMISS.cmake b/ClassicalField/Diffusion/DiffusionLinearSource/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionLinearSource/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Diffusion/DiffusionLinearSource/build_debug/build.sh b/ClassicalField/Diffusion/DiffusionLinearSource/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionLinearSource/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Diffusion/DiffusionQuadraticSource/CMakeLists.txt b/ClassicalField/Diffusion/DiffusionQuadraticSource/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionQuadraticSource/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Diffusion/DiffusionQuadraticSource/Fortran/CMakeLists.txt b/ClassicalField/Diffusion/DiffusionQuadraticSource/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..47b09a3b
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionQuadraticSource/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(DiffusionQuadraticSource  src/DiffusionQuadraticSourceExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(DiffusionQuadraticSource PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(DiffusionQuadraticSource PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_DiffusionQuadraticSource COMMAND DiffusionQuadraticSource)
+add_opencmiss_environment(test_DiffusionQuadraticSource)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Diffusion/DiffusionQuadraticSource/src/DiffusionQuadraticSourceExample.f90 b/ClassicalField/Diffusion/DiffusionQuadraticSource/Fortran/src/DiffusionQuadraticSourceExample.f90
similarity index 100%
rename from ClassicalField/Diffusion/DiffusionQuadraticSource/src/DiffusionQuadraticSourceExample.f90
rename to ClassicalField/Diffusion/DiffusionQuadraticSource/Fortran/src/DiffusionQuadraticSourceExample.f90
diff --git a/ClassicalField/Diffusion/DiffusionQuadraticSource/OpenCMISS.cmake b/ClassicalField/Diffusion/DiffusionQuadraticSource/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionQuadraticSource/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Diffusion/DiffusionQuadraticSource/build_debug/build.sh b/ClassicalField/Diffusion/DiffusionQuadraticSource/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Diffusion/DiffusionQuadraticSource/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Diffusion/LinearConvergenceTest/CMakeLists.txt b/ClassicalField/Diffusion/LinearConvergenceTest/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Diffusion/LinearConvergenceTest/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Diffusion/LinearConvergenceTest/Fortran/CMakeLists.txt b/ClassicalField/Diffusion/LinearConvergenceTest/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..0c32f271
--- /dev/null
+++ b/ClassicalField/Diffusion/LinearConvergenceTest/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LinearConvergenceTest  src/LinearConvergenceTestExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LinearConvergenceTest PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LinearConvergenceTest PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LinearConvergenceTest COMMAND LinearConvergenceTest)
+add_opencmiss_environment(test_LinearConvergenceTest)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Diffusion/LinearConvergenceTest/src/LinearConvergenceTestExample.f90 b/ClassicalField/Diffusion/LinearConvergenceTest/Fortran/src/LinearConvergenceTestExample.f90
similarity index 100%
rename from ClassicalField/Diffusion/LinearConvergenceTest/src/LinearConvergenceTestExample.f90
rename to ClassicalField/Diffusion/LinearConvergenceTest/Fortran/src/LinearConvergenceTestExample.f90
diff --git a/ClassicalField/Diffusion/LinearConvergenceTest/OpenCMISS.cmake b/ClassicalField/Diffusion/LinearConvergenceTest/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Diffusion/LinearConvergenceTest/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Diffusion/LinearConvergenceTest/build_debug/build.sh b/ClassicalField/Diffusion/LinearConvergenceTest/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Diffusion/LinearConvergenceTest/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Diffusion/QuadraticConvergenceTest/CMakeLists.txt b/ClassicalField/Diffusion/QuadraticConvergenceTest/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Diffusion/QuadraticConvergenceTest/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Diffusion/QuadraticConvergenceTest/Fortran/CMakeLists.txt b/ClassicalField/Diffusion/QuadraticConvergenceTest/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..0b008dd7
--- /dev/null
+++ b/ClassicalField/Diffusion/QuadraticConvergenceTest/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(QuadraticConvergenceTest  src/QuadraticConvergenceTestExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(QuadraticConvergenceTest PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(QuadraticConvergenceTest PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_QuadraticConvergenceTest COMMAND QuadraticConvergenceTest)
+add_opencmiss_environment(test_QuadraticConvergenceTest)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Diffusion/QuadraticConvergenceTest/src/QuadraticConvergenceTestExample.f90 b/ClassicalField/Diffusion/QuadraticConvergenceTest/Fortran/src/QuadraticConvergenceTestExample.f90
similarity index 100%
rename from ClassicalField/Diffusion/QuadraticConvergenceTest/src/QuadraticConvergenceTestExample.f90
rename to ClassicalField/Diffusion/QuadraticConvergenceTest/Fortran/src/QuadraticConvergenceTestExample.f90
diff --git a/ClassicalField/Diffusion/QuadraticConvergenceTest/OpenCMISS.cmake b/ClassicalField/Diffusion/QuadraticConvergenceTest/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Diffusion/QuadraticConvergenceTest/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Diffusion/QuadraticConvergenceTest/build_debug/build.sh b/ClassicalField/Diffusion/QuadraticConvergenceTest/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Diffusion/QuadraticConvergenceTest/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Hamilton_Jacobi/GeodesicEx1/CMakeLists.txt b/ClassicalField/Hamilton_Jacobi/GeodesicEx1/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Hamilton_Jacobi/GeodesicEx1/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Hamilton_Jacobi/GeodesicEx1/Fortran/CMakeLists.txt b/ClassicalField/Hamilton_Jacobi/GeodesicEx1/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..a1d587e4
--- /dev/null
+++ b/ClassicalField/Hamilton_Jacobi/GeodesicEx1/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(GeodesicEx1  src/GeodesicEx1.ele src/GeodesicEx1Example.f90 src/GeodesicEx1.node)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(GeodesicEx1 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(GeodesicEx1 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_GeodesicEx1 COMMAND GeodesicEx1)
+add_opencmiss_environment(test_GeodesicEx1)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Hamilton_Jacobi/GeodesicEx1/src/GeodesicEx1.ele b/ClassicalField/Hamilton_Jacobi/GeodesicEx1/Fortran/src/GeodesicEx1.ele
similarity index 100%
rename from ClassicalField/Hamilton_Jacobi/GeodesicEx1/src/GeodesicEx1.ele
rename to ClassicalField/Hamilton_Jacobi/GeodesicEx1/Fortran/src/GeodesicEx1.ele
diff --git a/ClassicalField/Hamilton_Jacobi/GeodesicEx1/src/GeodesicEx1.node b/ClassicalField/Hamilton_Jacobi/GeodesicEx1/Fortran/src/GeodesicEx1.node
similarity index 100%
rename from ClassicalField/Hamilton_Jacobi/GeodesicEx1/src/GeodesicEx1.node
rename to ClassicalField/Hamilton_Jacobi/GeodesicEx1/Fortran/src/GeodesicEx1.node
diff --git a/ClassicalField/Hamilton_Jacobi/GeodesicEx1/src/GeodesicEx1Example.f90 b/ClassicalField/Hamilton_Jacobi/GeodesicEx1/Fortran/src/GeodesicEx1Example.f90
similarity index 100%
rename from ClassicalField/Hamilton_Jacobi/GeodesicEx1/src/GeodesicEx1Example.f90
rename to ClassicalField/Hamilton_Jacobi/GeodesicEx1/Fortran/src/GeodesicEx1Example.f90
diff --git a/ClassicalField/Hamilton_Jacobi/GeodesicEx1/OpenCMISS.cmake b/ClassicalField/Hamilton_Jacobi/GeodesicEx1/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Hamilton_Jacobi/GeodesicEx1/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Hamilton_Jacobi/GeodesicEx1/build_debug/build.sh b/ClassicalField/Hamilton_Jacobi/GeodesicEx1/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Hamilton_Jacobi/GeodesicEx1/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Hamilton_Jacobi/TwoElmnTet/CMakeLists.txt b/ClassicalField/Hamilton_Jacobi/TwoElmnTet/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Hamilton_Jacobi/TwoElmnTet/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Hamilton_Jacobi/TwoElmnTet/Fortran/CMakeLists.txt b/ClassicalField/Hamilton_Jacobi/TwoElmnTet/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..7e15ee00
--- /dev/null
+++ b/ClassicalField/Hamilton_Jacobi/TwoElmnTet/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(TwoElmnTet  src/TwoElmnTet.estm src/TwoElmnTet.cond src/TwoElmnTet.node src/TwoElmnTet.ele src/TwoElmnTetExample.f90 src/TwoElmnTet.fiber)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(TwoElmnTet PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(TwoElmnTet PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_TwoElmnTet COMMAND TwoElmnTet)
+add_opencmiss_environment(test_TwoElmnTet)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Hamilton_Jacobi/TwoElmnTet/src/TwoElmnTet.cond b/ClassicalField/Hamilton_Jacobi/TwoElmnTet/Fortran/src/TwoElmnTet.cond
similarity index 100%
rename from ClassicalField/Hamilton_Jacobi/TwoElmnTet/src/TwoElmnTet.cond
rename to ClassicalField/Hamilton_Jacobi/TwoElmnTet/Fortran/src/TwoElmnTet.cond
diff --git a/ClassicalField/Hamilton_Jacobi/TwoElmnTet/src/TwoElmnTet.ele b/ClassicalField/Hamilton_Jacobi/TwoElmnTet/Fortran/src/TwoElmnTet.ele
similarity index 100%
rename from ClassicalField/Hamilton_Jacobi/TwoElmnTet/src/TwoElmnTet.ele
rename to ClassicalField/Hamilton_Jacobi/TwoElmnTet/Fortran/src/TwoElmnTet.ele
diff --git a/ClassicalField/Hamilton_Jacobi/TwoElmnTet/src/TwoElmnTet.estm b/ClassicalField/Hamilton_Jacobi/TwoElmnTet/Fortran/src/TwoElmnTet.estm
similarity index 100%
rename from ClassicalField/Hamilton_Jacobi/TwoElmnTet/src/TwoElmnTet.estm
rename to ClassicalField/Hamilton_Jacobi/TwoElmnTet/Fortran/src/TwoElmnTet.estm
diff --git a/ClassicalField/Hamilton_Jacobi/TwoElmnTet/src/TwoElmnTet.fiber b/ClassicalField/Hamilton_Jacobi/TwoElmnTet/Fortran/src/TwoElmnTet.fiber
similarity index 100%
rename from ClassicalField/Hamilton_Jacobi/TwoElmnTet/src/TwoElmnTet.fiber
rename to ClassicalField/Hamilton_Jacobi/TwoElmnTet/Fortran/src/TwoElmnTet.fiber
diff --git a/ClassicalField/Hamilton_Jacobi/TwoElmnTet/src/TwoElmnTet.node b/ClassicalField/Hamilton_Jacobi/TwoElmnTet/Fortran/src/TwoElmnTet.node
similarity index 100%
rename from ClassicalField/Hamilton_Jacobi/TwoElmnTet/src/TwoElmnTet.node
rename to ClassicalField/Hamilton_Jacobi/TwoElmnTet/Fortran/src/TwoElmnTet.node
diff --git a/ClassicalField/Hamilton_Jacobi/TwoElmnTet/src/TwoElmnTetExample.f90 b/ClassicalField/Hamilton_Jacobi/TwoElmnTet/Fortran/src/TwoElmnTetExample.f90
similarity index 100%
rename from ClassicalField/Hamilton_Jacobi/TwoElmnTet/src/TwoElmnTetExample.f90
rename to ClassicalField/Hamilton_Jacobi/TwoElmnTet/Fortran/src/TwoElmnTetExample.f90
diff --git a/ClassicalField/Hamilton_Jacobi/TwoElmnTet/OpenCMISS.cmake b/ClassicalField/Hamilton_Jacobi/TwoElmnTet/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Hamilton_Jacobi/TwoElmnTet/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Hamilton_Jacobi/TwoElmnTet/build_debug/build.sh b/ClassicalField/Hamilton_Jacobi/TwoElmnTet/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Hamilton_Jacobi/TwoElmnTet/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Helmholtz/AnalyticHelmholtz/CMakeLists.txt b/ClassicalField/Helmholtz/AnalyticHelmholtz/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Helmholtz/AnalyticHelmholtz/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Helmholtz/AnalyticHelmholtz/Fortran/CMakeLists.txt b/ClassicalField/Helmholtz/AnalyticHelmholtz/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..f9a7c650
--- /dev/null
+++ b/ClassicalField/Helmholtz/AnalyticHelmholtz/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(AnalyticHelmholtz  src/AnalyticHelmholtzExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(AnalyticHelmholtz PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(AnalyticHelmholtz PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_AnalyticHelmholtz COMMAND AnalyticHelmholtz)
+add_opencmiss_environment(test_AnalyticHelmholtz)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Helmholtz/AnalyticHelmholtz/src/AnalyticHelmholtzExample.f90 b/ClassicalField/Helmholtz/AnalyticHelmholtz/Fortran/src/AnalyticHelmholtzExample.f90
similarity index 100%
rename from ClassicalField/Helmholtz/AnalyticHelmholtz/src/AnalyticHelmholtzExample.f90
rename to ClassicalField/Helmholtz/AnalyticHelmholtz/Fortran/src/AnalyticHelmholtzExample.f90
diff --git a/ClassicalField/Helmholtz/AnalyticHelmholtz/OpenCMISS.cmake b/ClassicalField/Helmholtz/AnalyticHelmholtz/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Helmholtz/AnalyticHelmholtz/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Helmholtz/AnalyticHelmholtz/build_debug/build.sh b/ClassicalField/Helmholtz/AnalyticHelmholtz/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Helmholtz/AnalyticHelmholtz/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Helmholtz/Helmholtz/CMakeLists.txt b/ClassicalField/Helmholtz/Helmholtz/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Helmholtz/Helmholtz/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Helmholtz/Helmholtz/Fortran/CMakeLists.txt b/ClassicalField/Helmholtz/Helmholtz/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..bd9cb32a
--- /dev/null
+++ b/ClassicalField/Helmholtz/Helmholtz/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Helmholtz  src/HelmholtzExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Helmholtz PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Helmholtz PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Helmholtz COMMAND Helmholtz)
+add_opencmiss_environment(test_Helmholtz)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Helmholtz/Helmholtz/src/HelmholtzExample.f90 b/ClassicalField/Helmholtz/Helmholtz/Fortran/src/HelmholtzExample.f90
similarity index 100%
rename from ClassicalField/Helmholtz/Helmholtz/src/HelmholtzExample.f90
rename to ClassicalField/Helmholtz/Helmholtz/Fortran/src/HelmholtzExample.f90
diff --git a/ClassicalField/Helmholtz/Helmholtz/OpenCMISS.cmake b/ClassicalField/Helmholtz/Helmholtz/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Helmholtz/Helmholtz/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Helmholtz/Helmholtz/build_debug/build.sh b/ClassicalField/Helmholtz/Helmholtz/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Helmholtz/Helmholtz/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Laplace/42Master/CMakeLists.txt b/ClassicalField/Laplace/42Master/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Laplace/42Master/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Laplace/42Master/Fortran/CMakeLists.txt b/ClassicalField/Laplace/42Master/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..20e09803
--- /dev/null
+++ b/ClassicalField/Laplace/42Master/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(42Master  src/42MasterExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(42Master PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(42Master PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_42Master COMMAND 42Master)
+add_opencmiss_environment(test_42Master)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Laplace/42Master/src/42MasterExample.f90 b/ClassicalField/Laplace/42Master/Fortran/src/42MasterExample.f90
similarity index 100%
rename from ClassicalField/Laplace/42Master/src/42MasterExample.f90
rename to ClassicalField/Laplace/42Master/Fortran/src/42MasterExample.f90
diff --git a/ClassicalField/Laplace/42Master/OpenCMISS.cmake b/ClassicalField/Laplace/42Master/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Laplace/42Master/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Laplace/42Master/build_debug/build.sh b/ClassicalField/Laplace/42Master/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Laplace/42Master/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Laplace/AnalyticLaplace/CMakeLists.txt b/ClassicalField/Laplace/AnalyticLaplace/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Laplace/AnalyticLaplace/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Laplace/AnalyticLaplace/Fortran/CMakeLists.txt b/ClassicalField/Laplace/AnalyticLaplace/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..637d0827
--- /dev/null
+++ b/ClassicalField/Laplace/AnalyticLaplace/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(AnalyticLaplace  src/AnalyticLaplaceExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(AnalyticLaplace PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(AnalyticLaplace PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_AnalyticLaplace COMMAND AnalyticLaplace)
+add_opencmiss_environment(test_AnalyticLaplace)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Laplace/AnalyticLaplace/src/AnalyticLaplaceExample.f90 b/ClassicalField/Laplace/AnalyticLaplace/Fortran/src/AnalyticLaplaceExample.f90
similarity index 100%
rename from ClassicalField/Laplace/AnalyticLaplace/src/AnalyticLaplaceExample.f90
rename to ClassicalField/Laplace/AnalyticLaplace/Fortran/src/AnalyticLaplaceExample.f90
diff --git a/ClassicalField/Laplace/AnalyticLaplace/OpenCMISS.cmake b/ClassicalField/Laplace/AnalyticLaplace/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Laplace/AnalyticLaplace/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Laplace/AnalyticLaplace/build_debug/build.sh b/ClassicalField/Laplace/AnalyticLaplace/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Laplace/AnalyticLaplace/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Laplace/Embedded1DLaplace/CMakeLists.txt b/ClassicalField/Laplace/Embedded1DLaplace/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Laplace/Embedded1DLaplace/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Laplace/Embedded1DLaplace/Fortran/CMakeLists.txt b/ClassicalField/Laplace/Embedded1DLaplace/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..3381efd4
--- /dev/null
+++ b/ClassicalField/Laplace/Embedded1DLaplace/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Embedded1DLaplace  src/Embedded1DLaplaceExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Embedded1DLaplace PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Embedded1DLaplace PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Embedded1DLaplace COMMAND Embedded1DLaplace)
+add_opencmiss_environment(test_Embedded1DLaplace)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Laplace/Embedded1DLaplace/src/Embedded1DLaplaceExample.f90 b/ClassicalField/Laplace/Embedded1DLaplace/Fortran/src/Embedded1DLaplaceExample.f90
similarity index 100%
rename from ClassicalField/Laplace/Embedded1DLaplace/src/Embedded1DLaplaceExample.f90
rename to ClassicalField/Laplace/Embedded1DLaplace/Fortran/src/Embedded1DLaplaceExample.f90
diff --git a/ClassicalField/Laplace/Embedded1DLaplace/OpenCMISS.cmake b/ClassicalField/Laplace/Embedded1DLaplace/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Laplace/Embedded1DLaplace/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Laplace/Embedded1DLaplace/build_debug/build.sh b/ClassicalField/Laplace/Embedded1DLaplace/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Laplace/Embedded1DLaplace/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Laplace/Embedded2DLaplace/CMakeLists.txt b/ClassicalField/Laplace/Embedded2DLaplace/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Laplace/Embedded2DLaplace/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Laplace/Embedded2DLaplace/Fortran/CMakeLists.txt b/ClassicalField/Laplace/Embedded2DLaplace/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..b13fe299
--- /dev/null
+++ b/ClassicalField/Laplace/Embedded2DLaplace/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Embedded2DLaplace  src/Embedded2DLaplaceExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Embedded2DLaplace PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Embedded2DLaplace PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Embedded2DLaplace COMMAND Embedded2DLaplace)
+add_opencmiss_environment(test_Embedded2DLaplace)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Laplace/Embedded2DLaplace/src/Embedded2DLaplaceExample.f90 b/ClassicalField/Laplace/Embedded2DLaplace/Fortran/src/Embedded2DLaplaceExample.f90
similarity index 100%
rename from ClassicalField/Laplace/Embedded2DLaplace/src/Embedded2DLaplaceExample.f90
rename to ClassicalField/Laplace/Embedded2DLaplace/Fortran/src/Embedded2DLaplaceExample.f90
diff --git a/ClassicalField/Laplace/Embedded2DLaplace/OpenCMISS.cmake b/ClassicalField/Laplace/Embedded2DLaplace/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Laplace/Embedded2DLaplace/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Laplace/Embedded2DLaplace/build_debug/build.sh b/ClassicalField/Laplace/Embedded2DLaplace/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Laplace/Embedded2DLaplace/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Laplace/GeneralisedLaplace/CMakeLists.txt b/ClassicalField/Laplace/GeneralisedLaplace/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Laplace/GeneralisedLaplace/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Laplace/GeneralisedLaplace/Fortran/CMakeLists.txt b/ClassicalField/Laplace/GeneralisedLaplace/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..5ba57d29
--- /dev/null
+++ b/ClassicalField/Laplace/GeneralisedLaplace/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(GeneralisedLaplace  src/FortranExample.f90 src/FortranExample_2D_testproblem.f90 src/FortranExample_3D_tests.f90 src/FortranExample_3D_testproblem.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(GeneralisedLaplace PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(GeneralisedLaplace PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_GeneralisedLaplace COMMAND GeneralisedLaplace)
+add_opencmiss_environment(test_GeneralisedLaplace)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Laplace/GeneralisedLaplace/OpenCMISS.cmake b/ClassicalField/Laplace/GeneralisedLaplace/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Laplace/GeneralisedLaplace/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Laplace/GeneralisedLaplace/build_debug/build.sh b/ClassicalField/Laplace/GeneralisedLaplace/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Laplace/GeneralisedLaplace/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Laplace/Laplace/C/CMakeLists.txt b/ClassicalField/Laplace/Laplace/C/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Laplace/Laplace/C/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Laplace/Laplace/C/Fortran/CMakeLists.txt b/ClassicalField/Laplace/Laplace/C/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..e36192d0
--- /dev/null
+++ b/ClassicalField/Laplace/Laplace/C/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(C  src/CExample.c)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(C PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(C PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_C COMMAND C)
+add_opencmiss_environment(test_C)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Laplace/Laplace/C/src/CExample.c b/ClassicalField/Laplace/Laplace/C/Fortran/src/CExample.c
similarity index 100%
rename from ClassicalField/Laplace/Laplace/C/src/CExample.c
rename to ClassicalField/Laplace/Laplace/C/Fortran/src/CExample.c
diff --git a/ClassicalField/Laplace/Laplace/C/OpenCMISS.cmake b/ClassicalField/Laplace/Laplace/C/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Laplace/Laplace/C/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Laplace/Laplace/C/build_debug/build.sh b/ClassicalField/Laplace/Laplace/C/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Laplace/Laplace/C/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Laplace/Laplace/CMakeLists.txt b/ClassicalField/Laplace/Laplace/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Laplace/Laplace/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Laplace/Laplace/Fortran/CMakeLists.txt b/ClassicalField/Laplace/Laplace/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..cae95104
--- /dev/null
+++ b/ClassicalField/Laplace/Laplace/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Laplace  src/FortranExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Laplace PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Laplace PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Laplace COMMAND Laplace)
+add_opencmiss_environment(test_Laplace)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Laplace/Laplace/OpenCMISS.cmake b/ClassicalField/Laplace/Laplace/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Laplace/Laplace/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Laplace/Laplace/build_debug/build.sh b/ClassicalField/Laplace/Laplace/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Laplace/Laplace/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Laplace/LaplaceEllipsoid/CMakeLists.txt b/ClassicalField/Laplace/LaplaceEllipsoid/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Laplace/LaplaceEllipsoid/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Laplace/LaplaceEllipsoid/Fortran/CMakeLists.txt b/ClassicalField/Laplace/LaplaceEllipsoid/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..cc09bf94
--- /dev/null
+++ b/ClassicalField/Laplace/LaplaceEllipsoid/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LaplaceEllipsoid  src/LaplaceEllipsoidExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LaplaceEllipsoid PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LaplaceEllipsoid PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LaplaceEllipsoid COMMAND LaplaceEllipsoid)
+add_opencmiss_environment(test_LaplaceEllipsoid)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Laplace/LaplaceEllipsoid/src/LaplaceEllipsoidExample.f90 b/ClassicalField/Laplace/LaplaceEllipsoid/Fortran/src/LaplaceEllipsoidExample.f90
similarity index 100%
rename from ClassicalField/Laplace/LaplaceEllipsoid/src/LaplaceEllipsoidExample.f90
rename to ClassicalField/Laplace/LaplaceEllipsoid/Fortran/src/LaplaceEllipsoidExample.f90
diff --git a/ClassicalField/Laplace/LaplaceEllipsoid/OpenCMISS.cmake b/ClassicalField/Laplace/LaplaceEllipsoid/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Laplace/LaplaceEllipsoid/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Laplace/LaplaceEllipsoid/build_debug/build.sh b/ClassicalField/Laplace/LaplaceEllipsoid/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Laplace/LaplaceEllipsoid/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Laplace/LaplaceEllipsoid_FieldML/CMakeLists.txt b/ClassicalField/Laplace/LaplaceEllipsoid_FieldML/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Laplace/LaplaceEllipsoid_FieldML/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Laplace/LaplaceEllipsoid_FieldML/Fortran/CMakeLists.txt b/ClassicalField/Laplace/LaplaceEllipsoid_FieldML/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..767b1883
--- /dev/null
+++ b/ClassicalField/Laplace/LaplaceEllipsoid_FieldML/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LaplaceEllipsoid_FieldML  src/LaplaceEllipsoid_FieldMLExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LaplaceEllipsoid_FieldML PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LaplaceEllipsoid_FieldML PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LaplaceEllipsoid_FieldML COMMAND LaplaceEllipsoid_FieldML)
+add_opencmiss_environment(test_LaplaceEllipsoid_FieldML)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Laplace/LaplaceEllipsoid_FieldML/src/LaplaceEllipsoid_FieldMLExample.f90 b/ClassicalField/Laplace/LaplaceEllipsoid_FieldML/Fortran/src/LaplaceEllipsoid_FieldMLExample.f90
similarity index 100%
rename from ClassicalField/Laplace/LaplaceEllipsoid_FieldML/src/LaplaceEllipsoid_FieldMLExample.f90
rename to ClassicalField/Laplace/LaplaceEllipsoid_FieldML/Fortran/src/LaplaceEllipsoid_FieldMLExample.f90
diff --git a/ClassicalField/Laplace/LaplaceEllipsoid_FieldML/OpenCMISS.cmake b/ClassicalField/Laplace/LaplaceEllipsoid_FieldML/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Laplace/LaplaceEllipsoid_FieldML/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Laplace/LaplaceEllipsoid_FieldML/build_debug/build.sh b/ClassicalField/Laplace/LaplaceEllipsoid_FieldML/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Laplace/LaplaceEllipsoid_FieldML/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Laplace/NumberLaplace/CMakeLists.txt b/ClassicalField/Laplace/NumberLaplace/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Laplace/NumberLaplace/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Laplace/NumberLaplace/Fortran/CMakeLists.txt b/ClassicalField/Laplace/NumberLaplace/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..863f79f4
--- /dev/null
+++ b/ClassicalField/Laplace/NumberLaplace/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(NumberLaplace  src/NumberLaplaceExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(NumberLaplace PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(NumberLaplace PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_NumberLaplace COMMAND NumberLaplace)
+add_opencmiss_environment(test_NumberLaplace)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Laplace/NumberLaplace/src/NumberLaplaceExample.f90 b/ClassicalField/Laplace/NumberLaplace/Fortran/src/NumberLaplaceExample.f90
similarity index 100%
rename from ClassicalField/Laplace/NumberLaplace/src/NumberLaplaceExample.f90
rename to ClassicalField/Laplace/NumberLaplace/Fortran/src/NumberLaplaceExample.f90
diff --git a/ClassicalField/Laplace/NumberLaplace/OpenCMISS.cmake b/ClassicalField/Laplace/NumberLaplace/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Laplace/NumberLaplace/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Laplace/NumberLaplace/build_debug/build.sh b/ClassicalField/Laplace/NumberLaplace/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Laplace/NumberLaplace/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Laplace/ParallelLaplace/CMakeLists.txt b/ClassicalField/Laplace/ParallelLaplace/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Laplace/ParallelLaplace/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Laplace/ParallelLaplace/Fortran/CMakeLists.txt b/ClassicalField/Laplace/ParallelLaplace/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..5a3faae8
--- /dev/null
+++ b/ClassicalField/Laplace/ParallelLaplace/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(ParallelLaplace  src/ParallelLaplaceExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(ParallelLaplace PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(ParallelLaplace PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_ParallelLaplace COMMAND ParallelLaplace)
+add_opencmiss_environment(test_ParallelLaplace)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Laplace/ParallelLaplace/src/ParallelLaplaceExample.f90 b/ClassicalField/Laplace/ParallelLaplace/Fortran/src/ParallelLaplaceExample.f90
similarity index 100%
rename from ClassicalField/Laplace/ParallelLaplace/src/ParallelLaplaceExample.f90
rename to ClassicalField/Laplace/ParallelLaplace/Fortran/src/ParallelLaplaceExample.f90
diff --git a/ClassicalField/Laplace/ParallelLaplace/OpenCMISS.cmake b/ClassicalField/Laplace/ParallelLaplace/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Laplace/ParallelLaplace/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Laplace/ParallelLaplace/build_debug/build.sh b/ClassicalField/Laplace/ParallelLaplace/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Laplace/ParallelLaplace/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Laplace/SimplexLaplace/Linear/CMakeLists.txt b/ClassicalField/Laplace/SimplexLaplace/Linear/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Laplace/SimplexLaplace/Linear/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Laplace/SimplexLaplace/Linear/Fortran/CMakeLists.txt b/ClassicalField/Laplace/SimplexLaplace/Linear/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..78e65438
--- /dev/null
+++ b/ClassicalField/Laplace/SimplexLaplace/Linear/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Linear  src/LinearExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Linear PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Linear PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Linear COMMAND Linear)
+add_opencmiss_environment(test_Linear)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Laplace/SimplexLaplace/Linear/src/LinearExample.f90 b/ClassicalField/Laplace/SimplexLaplace/Linear/Fortran/src/LinearExample.f90
similarity index 100%
rename from ClassicalField/Laplace/SimplexLaplace/Linear/src/LinearExample.f90
rename to ClassicalField/Laplace/SimplexLaplace/Linear/Fortran/src/LinearExample.f90
diff --git a/ClassicalField/Laplace/SimplexLaplace/Linear/OpenCMISS.cmake b/ClassicalField/Laplace/SimplexLaplace/Linear/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Laplace/SimplexLaplace/Linear/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Laplace/SimplexLaplace/Linear/build_debug/build.sh b/ClassicalField/Laplace/SimplexLaplace/Linear/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Laplace/SimplexLaplace/Linear/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Poisson/42Master/CMakeLists.txt b/ClassicalField/Poisson/42Master/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Poisson/42Master/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Poisson/42Master/Fortran/CMakeLists.txt b/ClassicalField/Poisson/42Master/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..20e09803
--- /dev/null
+++ b/ClassicalField/Poisson/42Master/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(42Master  src/42MasterExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(42Master PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(42Master PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_42Master COMMAND 42Master)
+add_opencmiss_environment(test_42Master)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Poisson/42Master/src/42MasterExample.f90 b/ClassicalField/Poisson/42Master/Fortran/src/42MasterExample.f90
similarity index 100%
rename from ClassicalField/Poisson/42Master/src/42MasterExample.f90
rename to ClassicalField/Poisson/42Master/Fortran/src/42MasterExample.f90
diff --git a/ClassicalField/Poisson/42Master/OpenCMISS.cmake b/ClassicalField/Poisson/42Master/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Poisson/42Master/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Poisson/42Master/build_debug/build.sh b/ClassicalField/Poisson/42Master/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Poisson/42Master/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Poisson/AnalyticNonlinearPoisson/CMakeLists.txt b/ClassicalField/Poisson/AnalyticNonlinearPoisson/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Poisson/AnalyticNonlinearPoisson/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Poisson/AnalyticNonlinearPoisson/Fortran/CMakeLists.txt b/ClassicalField/Poisson/AnalyticNonlinearPoisson/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..276611ec
--- /dev/null
+++ b/ClassicalField/Poisson/AnalyticNonlinearPoisson/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(AnalyticNonlinearPoisson  src/AnalyticNonlinearPoissonExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(AnalyticNonlinearPoisson PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(AnalyticNonlinearPoisson PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_AnalyticNonlinearPoisson COMMAND AnalyticNonlinearPoisson)
+add_opencmiss_environment(test_AnalyticNonlinearPoisson)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Poisson/AnalyticNonlinearPoisson/src/AnalyticNonlinearPoissonExample.f90 b/ClassicalField/Poisson/AnalyticNonlinearPoisson/Fortran/src/AnalyticNonlinearPoissonExample.f90
similarity index 100%
rename from ClassicalField/Poisson/AnalyticNonlinearPoisson/src/AnalyticNonlinearPoissonExample.f90
rename to ClassicalField/Poisson/AnalyticNonlinearPoisson/Fortran/src/AnalyticNonlinearPoissonExample.f90
diff --git a/ClassicalField/Poisson/AnalyticNonlinearPoisson/OpenCMISS.cmake b/ClassicalField/Poisson/AnalyticNonlinearPoisson/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Poisson/AnalyticNonlinearPoisson/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Poisson/AnalyticNonlinearPoisson/build_debug/build.sh b/ClassicalField/Poisson/AnalyticNonlinearPoisson/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Poisson/AnalyticNonlinearPoisson/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Poisson/ExtracellularBidomain/CMakeLists.txt b/ClassicalField/Poisson/ExtracellularBidomain/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Poisson/ExtracellularBidomain/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Poisson/ExtracellularBidomain/Fortran/CMakeLists.txt b/ClassicalField/Poisson/ExtracellularBidomain/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..4838b134
--- /dev/null
+++ b/ClassicalField/Poisson/ExtracellularBidomain/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(ExtracellularBidomain  src/FortranExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(ExtracellularBidomain PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(ExtracellularBidomain PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_ExtracellularBidomain COMMAND ExtracellularBidomain)
+add_opencmiss_environment(test_ExtracellularBidomain)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Poisson/ExtracellularBidomain/OpenCMISS.cmake b/ClassicalField/Poisson/ExtracellularBidomain/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Poisson/ExtracellularBidomain/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Poisson/ExtracellularBidomain/build_debug/build.sh b/ClassicalField/Poisson/ExtracellularBidomain/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Poisson/ExtracellularBidomain/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/Poisson/NonlinearPoisson/CMakeLists.txt b/ClassicalField/Poisson/NonlinearPoisson/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/Poisson/NonlinearPoisson/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/Poisson/NonlinearPoisson/Fortran/CMakeLists.txt b/ClassicalField/Poisson/NonlinearPoisson/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..073e8246
--- /dev/null
+++ b/ClassicalField/Poisson/NonlinearPoisson/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(NonlinearPoisson  src/NonlinearPoissonExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(NonlinearPoisson PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(NonlinearPoisson PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_NonlinearPoisson COMMAND NonlinearPoisson)
+add_opencmiss_environment(test_NonlinearPoisson)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/Poisson/NonlinearPoisson/src/NonlinearPoissonExample.f90 b/ClassicalField/Poisson/NonlinearPoisson/Fortran/src/NonlinearPoissonExample.f90
similarity index 100%
rename from ClassicalField/Poisson/NonlinearPoisson/src/NonlinearPoissonExample.f90
rename to ClassicalField/Poisson/NonlinearPoisson/Fortran/src/NonlinearPoissonExample.f90
diff --git a/ClassicalField/Poisson/NonlinearPoisson/OpenCMISS.cmake b/ClassicalField/Poisson/NonlinearPoisson/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/Poisson/NonlinearPoisson/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/Poisson/NonlinearPoisson/build_debug/build.sh b/ClassicalField/Poisson/NonlinearPoisson/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/Poisson/NonlinearPoisson/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/ReactionDiffusion/CellMLSplitReactionDiffusion1D/CMakeLists.txt b/ClassicalField/ReactionDiffusion/CellMLSplitReactionDiffusion1D/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/ReactionDiffusion/CellMLSplitReactionDiffusion1D/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/ReactionDiffusion/CellMLSplitReactionDiffusion1D/Fortran/CMakeLists.txt b/ClassicalField/ReactionDiffusion/CellMLSplitReactionDiffusion1D/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..6dcc50fc
--- /dev/null
+++ b/ClassicalField/ReactionDiffusion/CellMLSplitReactionDiffusion1D/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(CellMLSplitReactionDiffusion1D  src/CellMLSplitReactionDiffusion1DExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(CellMLSplitReactionDiffusion1D PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(CellMLSplitReactionDiffusion1D PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_CellMLSplitReactionDiffusion1D COMMAND CellMLSplitReactionDiffusion1D)
+add_opencmiss_environment(test_CellMLSplitReactionDiffusion1D)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/ReactionDiffusion/CellMLSplitReactionDiffusion1D/src/CellMLSplitReactionDiffusion1DExample.f90 b/ClassicalField/ReactionDiffusion/CellMLSplitReactionDiffusion1D/Fortran/src/CellMLSplitReactionDiffusion1DExample.f90
similarity index 100%
rename from ClassicalField/ReactionDiffusion/CellMLSplitReactionDiffusion1D/src/CellMLSplitReactionDiffusion1DExample.f90
rename to ClassicalField/ReactionDiffusion/CellMLSplitReactionDiffusion1D/Fortran/src/CellMLSplitReactionDiffusion1DExample.f90
diff --git a/ClassicalField/ReactionDiffusion/CellMLSplitReactionDiffusion1D/OpenCMISS.cmake b/ClassicalField/ReactionDiffusion/CellMLSplitReactionDiffusion1D/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/ReactionDiffusion/CellMLSplitReactionDiffusion1D/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/ReactionDiffusion/CellMLSplitReactionDiffusion1D/build_debug/build.sh b/ClassicalField/ReactionDiffusion/CellMLSplitReactionDiffusion1D/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/ReactionDiffusion/CellMLSplitReactionDiffusion1D/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/ReactionDiffusion/ReactionDiffusionConstantSource1D/CMakeLists.txt b/ClassicalField/ReactionDiffusion/ReactionDiffusionConstantSource1D/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/ReactionDiffusion/ReactionDiffusionConstantSource1D/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/ReactionDiffusion/ReactionDiffusionConstantSource1D/Fortran/CMakeLists.txt b/ClassicalField/ReactionDiffusion/ReactionDiffusionConstantSource1D/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..ec4023e0
--- /dev/null
+++ b/ClassicalField/ReactionDiffusion/ReactionDiffusionConstantSource1D/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(ReactionDiffusionConstantSource1D  src/ReactionDiffusionConstantSource1DExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(ReactionDiffusionConstantSource1D PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(ReactionDiffusionConstantSource1D PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_ReactionDiffusionConstantSource1D COMMAND ReactionDiffusionConstantSource1D)
+add_opencmiss_environment(test_ReactionDiffusionConstantSource1D)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/ReactionDiffusion/ReactionDiffusionConstantSource1D/src/ReactionDiffusionConstantSource1DExample.f90 b/ClassicalField/ReactionDiffusion/ReactionDiffusionConstantSource1D/Fortran/src/ReactionDiffusionConstantSource1DExample.f90
similarity index 100%
rename from ClassicalField/ReactionDiffusion/ReactionDiffusionConstantSource1D/src/ReactionDiffusionConstantSource1DExample.f90
rename to ClassicalField/ReactionDiffusion/ReactionDiffusionConstantSource1D/Fortran/src/ReactionDiffusionConstantSource1DExample.f90
diff --git a/ClassicalField/ReactionDiffusion/ReactionDiffusionConstantSource1D/OpenCMISS.cmake b/ClassicalField/ReactionDiffusion/ReactionDiffusionConstantSource1D/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/ReactionDiffusion/ReactionDiffusionConstantSource1D/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/ReactionDiffusion/ReactionDiffusionConstantSource1D/build_debug/build.sh b/ClassicalField/ReactionDiffusion/ReactionDiffusionConstantSource1D/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/ReactionDiffusion/ReactionDiffusionConstantSource1D/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/ClassicalField/ReactionDiffusion/ReactionDiffusionNoSource1D/CMakeLists.txt b/ClassicalField/ReactionDiffusion/ReactionDiffusionNoSource1D/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/ClassicalField/ReactionDiffusion/ReactionDiffusionNoSource1D/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/ClassicalField/ReactionDiffusion/ReactionDiffusionNoSource1D/Fortran/CMakeLists.txt b/ClassicalField/ReactionDiffusion/ReactionDiffusionNoSource1D/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..e04a3c1b
--- /dev/null
+++ b/ClassicalField/ReactionDiffusion/ReactionDiffusionNoSource1D/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(ReactionDiffusionNoSource1D  src/ReactionDiffusionNoSource1DExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(ReactionDiffusionNoSource1D PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(ReactionDiffusionNoSource1D PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_ReactionDiffusionNoSource1D COMMAND ReactionDiffusionNoSource1D)
+add_opencmiss_environment(test_ReactionDiffusionNoSource1D)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/ClassicalField/ReactionDiffusion/ReactionDiffusionNoSource1D/src/ReactionDiffusionNoSource1DExample.f90 b/ClassicalField/ReactionDiffusion/ReactionDiffusionNoSource1D/Fortran/src/ReactionDiffusionNoSource1DExample.f90
similarity index 100%
rename from ClassicalField/ReactionDiffusion/ReactionDiffusionNoSource1D/src/ReactionDiffusionNoSource1DExample.f90
rename to ClassicalField/ReactionDiffusion/ReactionDiffusionNoSource1D/Fortran/src/ReactionDiffusionNoSource1DExample.f90
diff --git a/ClassicalField/ReactionDiffusion/ReactionDiffusionNoSource1D/OpenCMISS.cmake b/ClassicalField/ReactionDiffusion/ReactionDiffusionNoSource1D/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/ClassicalField/ReactionDiffusion/ReactionDiffusionNoSource1D/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/ClassicalField/ReactionDiffusion/ReactionDiffusionNoSource1D/build_debug/build.sh b/ClassicalField/ReactionDiffusion/ReactionDiffusionNoSource1D/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/ClassicalField/ReactionDiffusion/ReactionDiffusionNoSource1D/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/DataAssimilation/DataAssimilationConstantSystem/CMakeLists.txt b/DataAssimilation/DataAssimilationConstantSystem/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/DataAssimilation/DataAssimilationConstantSystem/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/DataAssimilation/DataAssimilationConstantSystem/Fortran/CMakeLists.txt b/DataAssimilation/DataAssimilationConstantSystem/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..a9bdfada
--- /dev/null
+++ b/DataAssimilation/DataAssimilationConstantSystem/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(DataAssimilationConstantSystem  src/data_assimilation_test01.cpp)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(DataAssimilationConstantSystem PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(DataAssimilationConstantSystem PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_DataAssimilationConstantSystem COMMAND DataAssimilationConstantSystem)
+add_opencmiss_environment(test_DataAssimilationConstantSystem)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/DataAssimilation/DataAssimilationConstantSystem/src/data_assimilation_test01.cpp b/DataAssimilation/DataAssimilationConstantSystem/Fortran/src/data_assimilation_test01.cpp
similarity index 100%
rename from DataAssimilation/DataAssimilationConstantSystem/src/data_assimilation_test01.cpp
rename to DataAssimilation/DataAssimilationConstantSystem/Fortran/src/data_assimilation_test01.cpp
diff --git a/DataAssimilation/DataAssimilationConstantSystem/OpenCMISS.cmake b/DataAssimilation/DataAssimilationConstantSystem/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/DataAssimilation/DataAssimilationConstantSystem/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/DataAssimilation/DataAssimilationConstantSystem/build_debug/build.sh b/DataAssimilation/DataAssimilationConstantSystem/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/DataAssimilation/DataAssimilationConstantSystem/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/DataAssimilation/DataAssimilationInflationGuccione/CMakeLists.txt b/DataAssimilation/DataAssimilationInflationGuccione/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/DataAssimilation/DataAssimilationInflationGuccione/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/DataAssimilation/DataAssimilationInflationGuccione/Fortran/CMakeLists.txt b/DataAssimilation/DataAssimilationInflationGuccione/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..5d85bb95
--- /dev/null
+++ b/DataAssimilation/DataAssimilationInflationGuccione/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(DataAssimilationInflationGuccione  src/DataAssimilationInflationGuccioneExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(DataAssimilationInflationGuccione PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(DataAssimilationInflationGuccione PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_DataAssimilationInflationGuccione COMMAND DataAssimilationInflationGuccione)
+add_opencmiss_environment(test_DataAssimilationInflationGuccione)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/DataAssimilation/DataAssimilationInflationGuccione/src/DataAssimilationInflationGuccioneExample.f90 b/DataAssimilation/DataAssimilationInflationGuccione/Fortran/src/DataAssimilationInflationGuccioneExample.f90
similarity index 100%
rename from DataAssimilation/DataAssimilationInflationGuccione/src/DataAssimilationInflationGuccioneExample.f90
rename to DataAssimilation/DataAssimilationInflationGuccione/Fortran/src/DataAssimilationInflationGuccioneExample.f90
diff --git a/DataAssimilation/DataAssimilationInflationGuccione/OpenCMISS.cmake b/DataAssimilation/DataAssimilationInflationGuccione/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/DataAssimilation/DataAssimilationInflationGuccione/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/DataAssimilation/DataAssimilationInflationGuccione/build_debug/build.sh b/DataAssimilation/DataAssimilationInflationGuccione/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/DataAssimilation/DataAssimilationInflationGuccione/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/DataAssimilation/DataAssimilationUniExtension/CMakeLists.txt b/DataAssimilation/DataAssimilationUniExtension/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/DataAssimilation/DataAssimilationUniExtension/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/DataAssimilation/DataAssimilationUniExtension/Fortran/CMakeLists.txt b/DataAssimilation/DataAssimilationUniExtension/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..b093fddf
--- /dev/null
+++ b/DataAssimilation/DataAssimilationUniExtension/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(DataAssimilationUniExtension  src/UniAxialExtensionExample.f90 src/data_assimilation_uniextension.cpp src/data_assimilation_uniextension_OpenCMISS_test.cpp)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(DataAssimilationUniExtension PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(DataAssimilationUniExtension PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_DataAssimilationUniExtension COMMAND DataAssimilationUniExtension)
+add_opencmiss_environment(test_DataAssimilationUniExtension)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/DataAssimilation/DataAssimilationUniExtension/src/UniAxialExtensionExample.f90 b/DataAssimilation/DataAssimilationUniExtension/Fortran/src/UniAxialExtensionExample.f90
similarity index 100%
rename from DataAssimilation/DataAssimilationUniExtension/src/UniAxialExtensionExample.f90
rename to DataAssimilation/DataAssimilationUniExtension/Fortran/src/UniAxialExtensionExample.f90
diff --git a/DataAssimilation/DataAssimilationUniExtension/src/data_assimilation_uniextension.cpp b/DataAssimilation/DataAssimilationUniExtension/Fortran/src/data_assimilation_uniextension.cpp
similarity index 100%
rename from DataAssimilation/DataAssimilationUniExtension/src/data_assimilation_uniextension.cpp
rename to DataAssimilation/DataAssimilationUniExtension/Fortran/src/data_assimilation_uniextension.cpp
diff --git a/DataAssimilation/DataAssimilationUniExtension/src/data_assimilation_uniextension_OpenCMISS_test.cpp b/DataAssimilation/DataAssimilationUniExtension/Fortran/src/data_assimilation_uniextension_OpenCMISS_test.cpp
similarity index 100%
rename from DataAssimilation/DataAssimilationUniExtension/src/data_assimilation_uniextension_OpenCMISS_test.cpp
rename to DataAssimilation/DataAssimilationUniExtension/Fortran/src/data_assimilation_uniextension_OpenCMISS_test.cpp
diff --git a/DataAssimilation/DataAssimilationUniExtension/OpenCMISS.cmake b/DataAssimilation/DataAssimilationUniExtension/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/DataAssimilation/DataAssimilationUniExtension/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/DataAssimilation/DataAssimilationUniExtension/build_debug/build.sh b/DataAssimilation/DataAssimilationUniExtension/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/DataAssimilation/DataAssimilationUniExtension/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/DataProjection/1DRectangularCartesian/CMakeLists.txt b/DataProjection/1DRectangularCartesian/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/DataProjection/1DRectangularCartesian/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/DataProjection/1DRectangularCartesian/Fortran/CMakeLists.txt b/DataProjection/1DRectangularCartesian/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..3ae6541c
--- /dev/null
+++ b/DataProjection/1DRectangularCartesian/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(1DRectangularCartesian  src/1DRectangularCartesianExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(1DRectangularCartesian PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(1DRectangularCartesian PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_1DRectangularCartesian COMMAND 1DRectangularCartesian)
+add_opencmiss_environment(test_1DRectangularCartesian)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/DataProjection/1DRectangularCartesian/src/1DRectangularCartesianExample.f90 b/DataProjection/1DRectangularCartesian/Fortran/src/1DRectangularCartesianExample.f90
similarity index 100%
rename from DataProjection/1DRectangularCartesian/src/1DRectangularCartesianExample.f90
rename to DataProjection/1DRectangularCartesian/Fortran/src/1DRectangularCartesianExample.f90
diff --git a/DataProjection/1DRectangularCartesian/OpenCMISS.cmake b/DataProjection/1DRectangularCartesian/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/DataProjection/1DRectangularCartesian/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/DataProjection/1DRectangularCartesian/build_debug/build.sh b/DataProjection/1DRectangularCartesian/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/DataProjection/1DRectangularCartesian/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/DataProjection/2DRectangularCartesian/CMakeLists.txt b/DataProjection/2DRectangularCartesian/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/DataProjection/2DRectangularCartesian/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/DataProjection/2DRectangularCartesian/Fortran/CMakeLists.txt b/DataProjection/2DRectangularCartesian/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..82af0215
--- /dev/null
+++ b/DataProjection/2DRectangularCartesian/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(2DRectangularCartesian  src/2DRectangularCartesianExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(2DRectangularCartesian PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(2DRectangularCartesian PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_2DRectangularCartesian COMMAND 2DRectangularCartesian)
+add_opencmiss_environment(test_2DRectangularCartesian)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/DataProjection/2DRectangularCartesian/src/2DRectangularCartesianExample.f90 b/DataProjection/2DRectangularCartesian/Fortran/src/2DRectangularCartesianExample.f90
similarity index 100%
rename from DataProjection/2DRectangularCartesian/src/2DRectangularCartesianExample.f90
rename to DataProjection/2DRectangularCartesian/Fortran/src/2DRectangularCartesianExample.f90
diff --git a/DataProjection/2DRectangularCartesian/OpenCMISS.cmake b/DataProjection/2DRectangularCartesian/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/DataProjection/2DRectangularCartesian/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/DataProjection/2DRectangularCartesian/build_debug/build.sh b/DataProjection/2DRectangularCartesian/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/DataProjection/2DRectangularCartesian/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/DataProjection/3DRectangularCartesian/CMakeLists.txt b/DataProjection/3DRectangularCartesian/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/DataProjection/3DRectangularCartesian/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/DataProjection/3DRectangularCartesian/Fortran/CMakeLists.txt b/DataProjection/3DRectangularCartesian/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..a49ffa5b
--- /dev/null
+++ b/DataProjection/3DRectangularCartesian/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(3DRectangularCartesian  src/3DRectangularCartesianExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(3DRectangularCartesian PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(3DRectangularCartesian PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_3DRectangularCartesian COMMAND 3DRectangularCartesian)
+add_opencmiss_environment(test_3DRectangularCartesian)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/DataProjection/3DRectangularCartesian/src/3DRectangularCartesianExample.f90 b/DataProjection/3DRectangularCartesian/Fortran/src/3DRectangularCartesianExample.f90
similarity index 100%
rename from DataProjection/3DRectangularCartesian/src/3DRectangularCartesianExample.f90
rename to DataProjection/3DRectangularCartesian/Fortran/src/3DRectangularCartesianExample.f90
diff --git a/DataProjection/3DRectangularCartesian/OpenCMISS.cmake b/DataProjection/3DRectangularCartesian/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/DataProjection/3DRectangularCartesian/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/DataProjection/3DRectangularCartesian/build_debug/build.sh b/DataProjection/3DRectangularCartesian/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/DataProjection/3DRectangularCartesian/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/EmbeddedMesh/EmbeddedMeshBasic/CMakeLists.txt b/EmbeddedMesh/EmbeddedMeshBasic/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/EmbeddedMesh/EmbeddedMeshBasic/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/EmbeddedMesh/EmbeddedMeshBasic/Fortran/CMakeLists.txt b/EmbeddedMesh/EmbeddedMeshBasic/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..5753765d
--- /dev/null
+++ b/EmbeddedMesh/EmbeddedMeshBasic/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(EmbeddedMeshBasic  src/EmbeddedMeshBasicExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(EmbeddedMeshBasic PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(EmbeddedMeshBasic PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_EmbeddedMeshBasic COMMAND EmbeddedMeshBasic)
+add_opencmiss_environment(test_EmbeddedMeshBasic)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/EmbeddedMesh/EmbeddedMeshBasic/src/EmbeddedMeshBasicExample.f90 b/EmbeddedMesh/EmbeddedMeshBasic/Fortran/src/EmbeddedMeshBasicExample.f90
similarity index 100%
rename from EmbeddedMesh/EmbeddedMeshBasic/src/EmbeddedMeshBasicExample.f90
rename to EmbeddedMesh/EmbeddedMeshBasic/Fortran/src/EmbeddedMeshBasicExample.f90
diff --git a/EmbeddedMesh/EmbeddedMeshBasic/OpenCMISS.cmake b/EmbeddedMesh/EmbeddedMeshBasic/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/EmbeddedMesh/EmbeddedMeshBasic/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/EmbeddedMesh/EmbeddedMeshBasic/build_debug/build.sh b/EmbeddedMesh/EmbeddedMeshBasic/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/EmbeddedMesh/EmbeddedMeshBasic/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/EmbeddedMesh/EmbeddedMeshBasicWithMap/CMakeLists.txt b/EmbeddedMesh/EmbeddedMeshBasicWithMap/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/EmbeddedMesh/EmbeddedMeshBasicWithMap/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/EmbeddedMesh/EmbeddedMeshBasicWithMap/Fortran/CMakeLists.txt b/EmbeddedMesh/EmbeddedMeshBasicWithMap/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..42d6f24f
--- /dev/null
+++ b/EmbeddedMesh/EmbeddedMeshBasicWithMap/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(EmbeddedMeshBasicWithMap  src/EmbeddedMeshBasicWithMapExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(EmbeddedMeshBasicWithMap PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(EmbeddedMeshBasicWithMap PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_EmbeddedMeshBasicWithMap COMMAND EmbeddedMeshBasicWithMap)
+add_opencmiss_environment(test_EmbeddedMeshBasicWithMap)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/EmbeddedMesh/EmbeddedMeshBasicWithMap/src/EmbeddedMeshBasicWithMapExample.f90 b/EmbeddedMesh/EmbeddedMeshBasicWithMap/Fortran/src/EmbeddedMeshBasicWithMapExample.f90
similarity index 100%
rename from EmbeddedMesh/EmbeddedMeshBasicWithMap/src/EmbeddedMeshBasicWithMapExample.f90
rename to EmbeddedMesh/EmbeddedMeshBasicWithMap/Fortran/src/EmbeddedMeshBasicWithMapExample.f90
diff --git a/EmbeddedMesh/EmbeddedMeshBasicWithMap/OpenCMISS.cmake b/EmbeddedMesh/EmbeddedMeshBasicWithMap/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/EmbeddedMesh/EmbeddedMeshBasicWithMap/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/EmbeddedMesh/EmbeddedMeshBasicWithMap/build_debug/build.sh b/EmbeddedMesh/EmbeddedMeshBasicWithMap/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/EmbeddedMesh/EmbeddedMeshBasicWithMap/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/ActiveContraction/CMakeLists.txt b/FiniteElasticity/ActiveContraction/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/ActiveContraction/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/ActiveContraction/Fortran/CMakeLists.txt b/FiniteElasticity/ActiveContraction/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..34b2789e
--- /dev/null
+++ b/FiniteElasticity/ActiveContraction/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(ActiveContraction  src/ActiveContractionExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(ActiveContraction PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(ActiveContraction PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_ActiveContraction COMMAND ActiveContraction)
+add_opencmiss_environment(test_ActiveContraction)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/ActiveContraction/src/ActiveContractionExample.f90 b/FiniteElasticity/ActiveContraction/Fortran/src/ActiveContractionExample.f90
similarity index 100%
rename from FiniteElasticity/ActiveContraction/src/ActiveContractionExample.f90
rename to FiniteElasticity/ActiveContraction/Fortran/src/ActiveContractionExample.f90
diff --git a/FiniteElasticity/ActiveContraction/OpenCMISS.cmake b/FiniteElasticity/ActiveContraction/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/ActiveContraction/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/ActiveContraction/build_debug/build.sh b/FiniteElasticity/ActiveContraction/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/ActiveContraction/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/Cantilever/CMakeLists.txt b/FiniteElasticity/Cantilever/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/Cantilever/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/Cantilever/Fortran/CMakeLists.txt b/FiniteElasticity/Cantilever/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..3120cf36
--- /dev/null
+++ b/FiniteElasticity/Cantilever/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Cantilever  src/FortranExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Cantilever PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Cantilever PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Cantilever COMMAND Cantilever)
+add_opencmiss_environment(test_Cantilever)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/Cantilever/OpenCMISS.cmake b/FiniteElasticity/Cantilever/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/Cantilever/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/Cantilever/build_debug/build.sh b/FiniteElasticity/Cantilever/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/Cantilever/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/CuboidGeneric/CMakeLists.txt b/FiniteElasticity/CuboidGeneric/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/CuboidGeneric/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/CuboidGeneric/Fortran/CMakeLists.txt b/FiniteElasticity/CuboidGeneric/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..1bac8dba
--- /dev/null
+++ b/FiniteElasticity/CuboidGeneric/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(CuboidGeneric  src/CuboidGenericExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(CuboidGeneric PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(CuboidGeneric PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_CuboidGeneric COMMAND CuboidGeneric)
+add_opencmiss_environment(test_CuboidGeneric)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/CuboidGeneric/src/CuboidGenericExample.f90 b/FiniteElasticity/CuboidGeneric/Fortran/src/CuboidGenericExample.f90
similarity index 100%
rename from FiniteElasticity/CuboidGeneric/src/CuboidGenericExample.f90
rename to FiniteElasticity/CuboidGeneric/Fortran/src/CuboidGenericExample.f90
diff --git a/FiniteElasticity/CuboidGeneric/OpenCMISS.cmake b/FiniteElasticity/CuboidGeneric/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/CuboidGeneric/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/CuboidGeneric/build_debug/build.sh b/FiniteElasticity/CuboidGeneric/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/CuboidGeneric/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/CylinderInflation/CMakeLists.txt b/FiniteElasticity/CylinderInflation/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/CylinderInflation/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/CylinderInflation/Fortran/CMakeLists.txt b/FiniteElasticity/CylinderInflation/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..f5120962
--- /dev/null
+++ b/FiniteElasticity/CylinderInflation/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(CylinderInflation  src/CylinderInflationExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(CylinderInflation PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(CylinderInflation PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_CylinderInflation COMMAND CylinderInflation)
+add_opencmiss_environment(test_CylinderInflation)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/CylinderInflation/src/CylinderInflationExample.f90 b/FiniteElasticity/CylinderInflation/Fortran/src/CylinderInflationExample.f90
similarity index 100%
rename from FiniteElasticity/CylinderInflation/src/CylinderInflationExample.f90
rename to FiniteElasticity/CylinderInflation/Fortran/src/CylinderInflationExample.f90
diff --git a/FiniteElasticity/CylinderInflation/OpenCMISS.cmake b/FiniteElasticity/CylinderInflation/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/CylinderInflation/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/CylinderInflation/build_debug/build.sh b/FiniteElasticity/CylinderInflation/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/CylinderInflation/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/LargeUniAxialExtension/CMakeLists.txt b/FiniteElasticity/LargeUniAxialExtension/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/LargeUniAxialExtension/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/LargeUniAxialExtension/Fortran/CMakeLists.txt b/FiniteElasticity/LargeUniAxialExtension/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..754f3d3b
--- /dev/null
+++ b/FiniteElasticity/LargeUniAxialExtension/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LargeUniAxialExtension  src/FortranExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LargeUniAxialExtension PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LargeUniAxialExtension PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LargeUniAxialExtension COMMAND LargeUniAxialExtension)
+add_opencmiss_environment(test_LargeUniAxialExtension)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/LargeUniAxialExtension/OpenCMISS.cmake b/FiniteElasticity/LargeUniAxialExtension/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/LargeUniAxialExtension/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/LargeUniAxialExtension/build_debug/build.sh b/FiniteElasticity/LargeUniAxialExtension/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/LargeUniAxialExtension/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/Membrane/MembraneExtension2DSpace/CMakeLists.txt b/FiniteElasticity/Membrane/MembraneExtension2DSpace/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/Membrane/MembraneExtension2DSpace/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/Membrane/MembraneExtension2DSpace/Fortran/CMakeLists.txt b/FiniteElasticity/Membrane/MembraneExtension2DSpace/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..946f4313
--- /dev/null
+++ b/FiniteElasticity/Membrane/MembraneExtension2DSpace/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(MembraneExtension2DSpace  src/MembraneExtension2DSpaceExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(MembraneExtension2DSpace PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(MembraneExtension2DSpace PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_MembraneExtension2DSpace COMMAND MembraneExtension2DSpace)
+add_opencmiss_environment(test_MembraneExtension2DSpace)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/Membrane/MembraneExtension2DSpace/src/MembraneExtension2DSpaceExample.f90 b/FiniteElasticity/Membrane/MembraneExtension2DSpace/Fortran/src/MembraneExtension2DSpaceExample.f90
similarity index 100%
rename from FiniteElasticity/Membrane/MembraneExtension2DSpace/src/MembraneExtension2DSpaceExample.f90
rename to FiniteElasticity/Membrane/MembraneExtension2DSpace/Fortran/src/MembraneExtension2DSpaceExample.f90
diff --git a/FiniteElasticity/Membrane/MembraneExtension2DSpace/OpenCMISS.cmake b/FiniteElasticity/Membrane/MembraneExtension2DSpace/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/Membrane/MembraneExtension2DSpace/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/Membrane/MembraneExtension2DSpace/build_debug/build.sh b/FiniteElasticity/Membrane/MembraneExtension2DSpace/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/Membrane/MembraneExtension2DSpace/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/Membrane/MembraneExtension3DSpaceFlat/CMakeLists.txt b/FiniteElasticity/Membrane/MembraneExtension3DSpaceFlat/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/Membrane/MembraneExtension3DSpaceFlat/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/Membrane/MembraneExtension3DSpaceFlat/Fortran/CMakeLists.txt b/FiniteElasticity/Membrane/MembraneExtension3DSpaceFlat/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..532ac633
--- /dev/null
+++ b/FiniteElasticity/Membrane/MembraneExtension3DSpaceFlat/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(MembraneExtension3DSpaceFlat  src/MembraneExtension3DSpaceFlatExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(MembraneExtension3DSpaceFlat PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(MembraneExtension3DSpaceFlat PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_MembraneExtension3DSpaceFlat COMMAND MembraneExtension3DSpaceFlat)
+add_opencmiss_environment(test_MembraneExtension3DSpaceFlat)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/Membrane/MembraneExtension3DSpaceFlat/src/MembraneExtension3DSpaceFlatExample.f90 b/FiniteElasticity/Membrane/MembraneExtension3DSpaceFlat/Fortran/src/MembraneExtension3DSpaceFlatExample.f90
similarity index 100%
rename from FiniteElasticity/Membrane/MembraneExtension3DSpaceFlat/src/MembraneExtension3DSpaceFlatExample.f90
rename to FiniteElasticity/Membrane/MembraneExtension3DSpaceFlat/Fortran/src/MembraneExtension3DSpaceFlatExample.f90
diff --git a/FiniteElasticity/Membrane/MembraneExtension3DSpaceFlat/OpenCMISS.cmake b/FiniteElasticity/Membrane/MembraneExtension3DSpaceFlat/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/Membrane/MembraneExtension3DSpaceFlat/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/Membrane/MembraneExtension3DSpaceFlat/build_debug/build.sh b/FiniteElasticity/Membrane/MembraneExtension3DSpaceFlat/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/Membrane/MembraneExtension3DSpaceFlat/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/Membrane/MembraneExtension3DSpaceTilted/CMakeLists.txt b/FiniteElasticity/Membrane/MembraneExtension3DSpaceTilted/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/Membrane/MembraneExtension3DSpaceTilted/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/Membrane/MembraneExtension3DSpaceTilted/Fortran/CMakeLists.txt b/FiniteElasticity/Membrane/MembraneExtension3DSpaceTilted/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..2d71d154
--- /dev/null
+++ b/FiniteElasticity/Membrane/MembraneExtension3DSpaceTilted/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(MembraneExtension3DSpaceTilted  src/MembraneExtension3DSpaceTiltedExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(MembraneExtension3DSpaceTilted PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(MembraneExtension3DSpaceTilted PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_MembraneExtension3DSpaceTilted COMMAND MembraneExtension3DSpaceTilted)
+add_opencmiss_environment(test_MembraneExtension3DSpaceTilted)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/Membrane/MembraneExtension3DSpaceTilted/src/MembraneExtension3DSpaceTiltedExample.f90 b/FiniteElasticity/Membrane/MembraneExtension3DSpaceTilted/Fortran/src/MembraneExtension3DSpaceTiltedExample.f90
similarity index 100%
rename from FiniteElasticity/Membrane/MembraneExtension3DSpaceTilted/src/MembraneExtension3DSpaceTiltedExample.f90
rename to FiniteElasticity/Membrane/MembraneExtension3DSpaceTilted/Fortran/src/MembraneExtension3DSpaceTiltedExample.f90
diff --git a/FiniteElasticity/Membrane/MembraneExtension3DSpaceTilted/OpenCMISS.cmake b/FiniteElasticity/Membrane/MembraneExtension3DSpaceTilted/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/Membrane/MembraneExtension3DSpaceTilted/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/Membrane/MembraneExtension3DSpaceTilted/build_debug/build.sh b/FiniteElasticity/Membrane/MembraneExtension3DSpaceTilted/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/Membrane/MembraneExtension3DSpaceTilted/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/MixedBoundaryConditions/CMakeLists.txt b/FiniteElasticity/MixedBoundaryConditions/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/MixedBoundaryConditions/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/MixedBoundaryConditions/Fortran/CMakeLists.txt b/FiniteElasticity/MixedBoundaryConditions/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..62187105
--- /dev/null
+++ b/FiniteElasticity/MixedBoundaryConditions/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(MixedBoundaryConditions  src/MixedBoundaryConditionsExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(MixedBoundaryConditions PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(MixedBoundaryConditions PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_MixedBoundaryConditions COMMAND MixedBoundaryConditions)
+add_opencmiss_environment(test_MixedBoundaryConditions)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/MixedBoundaryConditions/src/MixedBoundaryConditionsExample.f90 b/FiniteElasticity/MixedBoundaryConditions/Fortran/src/MixedBoundaryConditionsExample.f90
similarity index 100%
rename from FiniteElasticity/MixedBoundaryConditions/src/MixedBoundaryConditionsExample.f90
rename to FiniteElasticity/MixedBoundaryConditions/Fortran/src/MixedBoundaryConditionsExample.f90
diff --git a/FiniteElasticity/MixedBoundaryConditions/OpenCMISS.cmake b/FiniteElasticity/MixedBoundaryConditions/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/MixedBoundaryConditions/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/MixedBoundaryConditions/build_debug/build.sh b/FiniteElasticity/MixedBoundaryConditions/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/MixedBoundaryConditions/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/MooneyRivlinInCellML/CMakeLists.txt b/FiniteElasticity/MooneyRivlinInCellML/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/MooneyRivlinInCellML/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/MooneyRivlinInCellML/Fortran/CMakeLists.txt b/FiniteElasticity/MooneyRivlinInCellML/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..8de170d5
--- /dev/null
+++ b/FiniteElasticity/MooneyRivlinInCellML/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(MooneyRivlinInCellML  src/MooneyRivlinInCellMLExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(MooneyRivlinInCellML PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(MooneyRivlinInCellML PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_MooneyRivlinInCellML COMMAND MooneyRivlinInCellML)
+add_opencmiss_environment(test_MooneyRivlinInCellML)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/MooneyRivlinInCellML/src/MooneyRivlinInCellMLExample.f90 b/FiniteElasticity/MooneyRivlinInCellML/Fortran/src/MooneyRivlinInCellMLExample.f90
similarity index 100%
rename from FiniteElasticity/MooneyRivlinInCellML/src/MooneyRivlinInCellMLExample.f90
rename to FiniteElasticity/MooneyRivlinInCellML/Fortran/src/MooneyRivlinInCellMLExample.f90
diff --git a/FiniteElasticity/MooneyRivlinInCellML/OpenCMISS.cmake b/FiniteElasticity/MooneyRivlinInCellML/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/MooneyRivlinInCellML/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/MooneyRivlinInCellML/build_debug/build.sh b/FiniteElasticity/MooneyRivlinInCellML/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/MooneyRivlinInCellML/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/QuadraticEllipsoid/CMakeLists.txt b/FiniteElasticity/QuadraticEllipsoid/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/QuadraticEllipsoid/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/QuadraticEllipsoid/Fortran/CMakeLists.txt b/FiniteElasticity/QuadraticEllipsoid/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..f346047d
--- /dev/null
+++ b/FiniteElasticity/QuadraticEllipsoid/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(QuadraticEllipsoid  src/QuadraticEllipsoidExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(QuadraticEllipsoid PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(QuadraticEllipsoid PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_QuadraticEllipsoid COMMAND QuadraticEllipsoid)
+add_opencmiss_environment(test_QuadraticEllipsoid)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/QuadraticEllipsoid/src/QuadraticEllipsoidExample.f90 b/FiniteElasticity/QuadraticEllipsoid/Fortran/src/QuadraticEllipsoidExample.f90
similarity index 100%
rename from FiniteElasticity/QuadraticEllipsoid/src/QuadraticEllipsoidExample.f90
rename to FiniteElasticity/QuadraticEllipsoid/Fortran/src/QuadraticEllipsoidExample.f90
diff --git a/FiniteElasticity/QuadraticEllipsoid/OpenCMISS.cmake b/FiniteElasticity/QuadraticEllipsoid/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/QuadraticEllipsoid/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/QuadraticEllipsoid/build_debug/build.sh b/FiniteElasticity/QuadraticEllipsoid/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/QuadraticEllipsoid/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/QuadraticEllipsoidCosta/CMakeLists.txt b/FiniteElasticity/QuadraticEllipsoidCosta/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/QuadraticEllipsoidCosta/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/QuadraticEllipsoidCosta/Fortran/CMakeLists.txt b/FiniteElasticity/QuadraticEllipsoidCosta/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..efca7c57
--- /dev/null
+++ b/FiniteElasticity/QuadraticEllipsoidCosta/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(QuadraticEllipsoidCosta  src/QuadraticEllipsoidCostaExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(QuadraticEllipsoidCosta PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(QuadraticEllipsoidCosta PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_QuadraticEllipsoidCosta COMMAND QuadraticEllipsoidCosta)
+add_opencmiss_environment(test_QuadraticEllipsoidCosta)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/QuadraticEllipsoidCosta/src/QuadraticEllipsoidCostaExample.f90 b/FiniteElasticity/QuadraticEllipsoidCosta/Fortran/src/QuadraticEllipsoidCostaExample.f90
similarity index 100%
rename from FiniteElasticity/QuadraticEllipsoidCosta/src/QuadraticEllipsoidCostaExample.f90
rename to FiniteElasticity/QuadraticEllipsoidCosta/Fortran/src/QuadraticEllipsoidCostaExample.f90
diff --git a/FiniteElasticity/QuadraticEllipsoidCosta/OpenCMISS.cmake b/FiniteElasticity/QuadraticEllipsoidCosta/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/QuadraticEllipsoidCosta/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/QuadraticEllipsoidCosta/build_debug/build.sh b/FiniteElasticity/QuadraticEllipsoidCosta/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/QuadraticEllipsoidCosta/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/QuadraticEllipsoidCostaReadIn/CMakeLists.txt b/FiniteElasticity/QuadraticEllipsoidCostaReadIn/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/QuadraticEllipsoidCostaReadIn/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/QuadraticEllipsoidCostaReadIn/Fortran/CMakeLists.txt b/FiniteElasticity/QuadraticEllipsoidCostaReadIn/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..0c080f11
--- /dev/null
+++ b/FiniteElasticity/QuadraticEllipsoidCostaReadIn/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(QuadraticEllipsoidCostaReadIn  src/QuadraticEllipsoidCostaReadInExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(QuadraticEllipsoidCostaReadIn PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(QuadraticEllipsoidCostaReadIn PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_QuadraticEllipsoidCostaReadIn COMMAND QuadraticEllipsoidCostaReadIn)
+add_opencmiss_environment(test_QuadraticEllipsoidCostaReadIn)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/QuadraticEllipsoidCostaReadIn/src/QuadraticEllipsoidCostaReadInExample.f90 b/FiniteElasticity/QuadraticEllipsoidCostaReadIn/Fortran/src/QuadraticEllipsoidCostaReadInExample.f90
similarity index 100%
rename from FiniteElasticity/QuadraticEllipsoidCostaReadIn/src/QuadraticEllipsoidCostaReadInExample.f90
rename to FiniteElasticity/QuadraticEllipsoidCostaReadIn/Fortran/src/QuadraticEllipsoidCostaReadInExample.f90
diff --git a/FiniteElasticity/QuadraticEllipsoidCostaReadIn/OpenCMISS.cmake b/FiniteElasticity/QuadraticEllipsoidCostaReadIn/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/QuadraticEllipsoidCostaReadIn/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/QuadraticEllipsoidCostaReadIn/build_debug/build.sh b/FiniteElasticity/QuadraticEllipsoidCostaReadIn/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/QuadraticEllipsoidCostaReadIn/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/RightBiceps/CMakeLists.txt b/FiniteElasticity/RightBiceps/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/RightBiceps/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/RightBiceps/Fortran/CMakeLists.txt b/FiniteElasticity/RightBiceps/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..912a54e1
--- /dev/null
+++ b/FiniteElasticity/RightBiceps/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(RightBiceps  src/FortranExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(RightBiceps PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(RightBiceps PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_RightBiceps COMMAND RightBiceps)
+add_opencmiss_environment(test_RightBiceps)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/RightBiceps/OpenCMISS.cmake b/FiniteElasticity/RightBiceps/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/RightBiceps/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/RightBiceps/build_debug/CMakeCache.txt b/FiniteElasticity/RightBiceps/build_debug/CMakeCache.txt
new file mode 100644
index 00000000..93b90a47
--- /dev/null
+++ b/FiniteElasticity/RightBiceps/build_debug/CMakeCache.txt
@@ -0,0 +1,799 @@
+# This is the CMakeCache file.
+# For build in directory: /store/software/opencmiss/OpenCMISS-examples/FiniteElasticity/RightBiceps/build_debug
+# It was generated by CMake: /usr/bin/cmake
+# You can edit this file to change values found and used by cmake.
+# If you do not want to change any of the values, simply exit the editor.
+# If you do want to change a value, simply edit, save, and exit the editor.
+# The syntax for the file is as follows:
+# KEY:TYPE=VALUE
+# KEY is the name of a variable in the cache.
+# TYPE is a hint to GUIs for the type of VALUE, DO NOT EDIT TYPE!.
+# VALUE is the current value for the KEY.
+
+########################
+# EXTERNAL cache entries
+########################
+
+//The directory containing a CMake configuration file for BLAS.
+BLAS_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/no_mpi/debug/cmake
+
+//The directory containing a CMake configuration file for BZip2.
+BZip2_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/no_mpi/debug/cmake
+
+//The directory containing a CMake configuration file for CELLML.
+CELLML_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/no_mpi/debug/cmake
+
+//Path to a program.
+CMAKE_AR:FILEPATH=/usr/bin/ar
+
+//Choose the type of build, options are: None(CMAKE_CXX_FLAGS or
+// CMAKE_C_FLAGS used) Debug Release RelWithDebInfo MinSizeRel.
+CMAKE_BUILD_TYPE:STRING=DEBUG
+
+//Enable/Disable color output during build.
+CMAKE_COLOR_MAKEFILE:BOOL=ON
+
+//C compiler
+CMAKE_C_COMPILER:FILEPATH=/usr/bin/cc
+
+//Flags used by the compiler during all build types.
+CMAKE_C_FLAGS:STRING=
+
+//Flags used by the compiler during debug builds.
+CMAKE_C_FLAGS_DEBUG:STRING=-g
+
+//Flags used by the compiler during release builds for minimum
+// size.
+CMAKE_C_FLAGS_MINSIZEREL:STRING=-Os -DNDEBUG
+
+//Flags used by the compiler during release builds.
+CMAKE_C_FLAGS_RELEASE:STRING=-O3 -DNDEBUG
+
+//Flags used by the compiler during release builds with debug info.
+CMAKE_C_FLAGS_RELWITHDEBINFO:STRING=-O2 -g -DNDEBUG
+
+//Flags used by the linker.
+CMAKE_EXE_LINKER_FLAGS:STRING=
+
+//Flags used by the linker during debug builds.
+CMAKE_EXE_LINKER_FLAGS_DEBUG:STRING=
+
+//Flags used by the linker during release minsize builds.
+CMAKE_EXE_LINKER_FLAGS_MINSIZEREL:STRING=
+
+//Flags used by the linker during release builds.
+CMAKE_EXE_LINKER_FLAGS_RELEASE:STRING=
+
+//Flags used by the linker during Release with Debug Info builds.
+CMAKE_EXE_LINKER_FLAGS_RELWITHDEBINFO:STRING=
+
+//Enable/Disable output of compile commands during generation.
+CMAKE_EXPORT_COMPILE_COMMANDS:BOOL=OFF
+
+//Fortran compiler
+CMAKE_Fortran_COMPILER:FILEPATH=/usr/bin/gfortran
+
+//Flags for Fortran compiler.
+CMAKE_Fortran_FLAGS:STRING=
+
+//Flags used by the compiler during debug builds.
+CMAKE_Fortran_FLAGS_DEBUG:STRING=-g
+
+//Flags used by the compiler during release builds for minimum
+// size.
+CMAKE_Fortran_FLAGS_MINSIZEREL:STRING=-Os
+
+//Flags used by the compiler during release builds.
+CMAKE_Fortran_FLAGS_RELEASE:STRING=-O3
+
+//Flags used by the compiler during release builds with debug info.
+CMAKE_Fortran_FLAGS_RELWITHDEBINFO:STRING=-O2 -g -DNDEBUG
+
+//Install path prefix, prepended onto install directories.
+CMAKE_INSTALL_PREFIX:PATH=/usr/local
+
+//Path to a program.
+CMAKE_LINKER:FILEPATH=/usr/bin/ld
+
+//Path to a program.
+CMAKE_MAKE_PROGRAM:FILEPATH=/usr/bin/make
+
+//Flags used by the linker during the creation of modules.
+CMAKE_MODULE_LINKER_FLAGS:STRING=
+
+//Flags used by the linker during debug builds.
+CMAKE_MODULE_LINKER_FLAGS_DEBUG:STRING=
+
+//Flags used by the linker during release minsize builds.
+CMAKE_MODULE_LINKER_FLAGS_MINSIZEREL:STRING=
+
+//Flags used by the linker during release builds.
+CMAKE_MODULE_LINKER_FLAGS_RELEASE:STRING=
+
+//Flags used by the linker during Release with Debug Info builds.
+CMAKE_MODULE_LINKER_FLAGS_RELWITHDEBINFO:STRING=
+
+//Path to a program.
+CMAKE_NM:FILEPATH=/usr/bin/nm
+
+//Path to a program.
+CMAKE_OBJCOPY:FILEPATH=/usr/bin/objcopy
+
+//Path to a program.
+CMAKE_OBJDUMP:FILEPATH=/usr/bin/objdump
+
+//Value Computed by CMake
+CMAKE_PROJECT_NAME:STATIC=OpenCMISS-Example
+
+//Path to a program.
+CMAKE_RANLIB:FILEPATH=/usr/bin/ranlib
+
+//Flags used by the linker during the creation of dll's.
+CMAKE_SHARED_LINKER_FLAGS:STRING=
+
+//Flags used by the linker during debug builds.
+CMAKE_SHARED_LINKER_FLAGS_DEBUG:STRING=
+
+//Flags used by the linker during release minsize builds.
+CMAKE_SHARED_LINKER_FLAGS_MINSIZEREL:STRING=
+
+//Flags used by the linker during release builds.
+CMAKE_SHARED_LINKER_FLAGS_RELEASE:STRING=
+
+//Flags used by the linker during Release with Debug Info builds.
+CMAKE_SHARED_LINKER_FLAGS_RELWITHDEBINFO:STRING=
+
+//If set, runtime paths are not added when installing shared libraries,
+// but are added when building.
+CMAKE_SKIP_INSTALL_RPATH:BOOL=NO
+
+//If set, runtime paths are not added when using shared libraries.
+CMAKE_SKIP_RPATH:BOOL=NO
+
+//Flags used by the linker during the creation of static libraries.
+CMAKE_STATIC_LINKER_FLAGS:STRING=
+
+//Flags used by the linker during debug builds.
+CMAKE_STATIC_LINKER_FLAGS_DEBUG:STRING=
+
+//Flags used by the linker during release minsize builds.
+CMAKE_STATIC_LINKER_FLAGS_MINSIZEREL:STRING=
+
+//Flags used by the linker during release builds.
+CMAKE_STATIC_LINKER_FLAGS_RELEASE:STRING=
+
+//Flags used by the linker during Release with Debug Info builds.
+CMAKE_STATIC_LINKER_FLAGS_RELWITHDEBINFO:STRING=
+
+//Path to a program.
+CMAKE_STRIP:FILEPATH=/usr/bin/strip
+
+//If this value is on, makefiles will be generated without the
+// .SILENT directive, and all commands will be echoed to the console
+// during the make.  This is useful for debugging only. With Visual
+// Studio IDE projects all commands are done without /nologo.
+CMAKE_VERBOSE_MAKEFILE:BOOL=FALSE
+
+//The directory containing a CMake configuration file for FIELDML-API.
+FIELDML-API_DIR:PATH=/store/software/opencmiss/iron_maierbn/install/x86_64_linux/gnu-5.4-F5.4/no_mpi/debug/cmake
+
+//The directory containing a CMake configuration file for HYPRE.
+HYPRE_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/openmpi_release/debug/cmake
+
+//The directory containing a CMake configuration file for IRON.
+IRON_DIR:PATH=/store/software/opencmiss/iron_maierbn/install/x86_64_linux/gnu-5.4-F5.4/openmpi_release/debug/cmake
+
+//The directory containing a CMake configuration file for LAPACK.
+LAPACK_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/no_mpi/debug/cmake
+
+//The directory containing a CMake configuration file for LIBCELLML.
+LIBCELLML_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/no_mpi/debug/cmake
+
+//The directory containing a CMake configuration file for LibXml2.
+LibXml2_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/no_mpi/debug/cmake
+
+//The directory containing a CMake configuration file for METIS.
+METIS_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/openmpi_release/debug/cmake
+
+//Executable for running MPI programs.
+MPIEXEC:FILEPATH=/usr/bin/mpiexec
+
+//Maximum number of processors available to run MPI applications.
+MPIEXEC_MAX_NUMPROCS:STRING=2
+
+//Flag used by MPI to specify the number of processes for MPIEXEC;
+// the next option will be the number of processes.
+MPIEXEC_NUMPROC_FLAG:STRING=-np
+
+//These flags will come after all flags given to MPIEXEC.
+MPIEXEC_POSTFLAGS:STRING=
+
+//These flags will be directly before the executable that is being
+// run by MPIEXEC.
+MPIEXEC_PREFLAGS:STRING=
+
+//Path to a program.
+MPI_C_COMPILER:FILEPATH=/usr/bin/mpicc
+
+//MPI C compilation flags
+MPI_C_COMPILE_FLAGS:STRING=
+
+//MPI C include path
+MPI_C_INCLUDE_PATH:STRING=/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent;/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent/include;/usr/lib/openmpi/include;/usr/lib/openmpi/include/openmpi
+
+//MPI C libraries to link against
+MPI_C_LIBRARIES:STRING=/usr/lib/openmpi/lib/libmpi.so
+
+//MPI C linking flags
+MPI_C_LINK_FLAGS:STRING= -Wl,-rpath  -Wl,/usr/lib/openmpi/lib  -Wl,--enable-new-dtags
+
+//Compatibility of MPI with toolchain is verified
+MPI_C_VERIFIED:BOOL=TRUE
+
+//Extra MPI libraries to link against
+MPI_EXTRA_LIBRARY:STRING=/usr/lib/openmpi/lib/libmpi_usempif08.so;/usr/lib/openmpi/lib/libmpi_usempi_ignore_tkr.so;/usr/lib/openmpi/lib/libmpi_mpifh.so;/usr/lib/openmpi/lib/libmpi.so
+
+//Path to a program.
+MPI_Fortran_COMPILER:FILEPATH=/usr/bin/mpif90
+
+//MPI Fortran compilation flags
+MPI_Fortran_COMPILE_FLAGS:STRING=
+
+//MPI Fortran include path
+MPI_Fortran_INCLUDE_PATH:STRING=/usr/lib/openmpi/include;/usr/lib/openmpi/lib
+
+//MPI Fortran libraries to link against
+MPI_Fortran_LIBRARIES:STRING=/usr/lib/openmpi/lib/libmpi_usempif08.so;/usr/lib/openmpi/lib/libmpi_usempi_ignore_tkr.so;/usr/lib/openmpi/lib/libmpi_mpifh.so;/usr/lib/openmpi/lib/libmpi.so
+
+//MPI Fortran linking flags
+MPI_Fortran_LINK_FLAGS:STRING= -Wl,-rpath  -Wl,/usr/lib/openmpi/lib  -Wl,--enable-new-dtags
+
+//Compatibility of MPI with toolchain is verified
+MPI_Fortran_VERIFIED:BOOL=TRUE
+
+//MPI library to link against
+MPI_LIBRARY:FILEPATH=/usr/lib/openmpi/lib/libmpi.so
+
+//The directory containing a CMake configuration file for MUMPS.
+MUMPS_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/openmpi_release/debug/cmake
+
+//No help, variable specified on the command line.
+OPENCMISS_BUILD_TYPE:UNINITIALIZED=DEBUG
+
+//Value Computed by CMake
+OpenCMISS-Example_BINARY_DIR:STATIC=/store/software/opencmiss/OpenCMISS-examples/FiniteElasticity/RightBiceps/build_debug
+
+//Value Computed by CMake
+OpenCMISS-Example_SOURCE_DIR:STATIC=/store/software/opencmiss/OpenCMISS-examples/FiniteElasticity/RightBiceps
+
+//Path to the found OpenCMISS (SDK) installation
+OpenCMISS_DIR:PATH=/store/software/opencmiss/iron_maierbn/install
+
+//The directory containing a CMake configuration file for PARMETIS.
+PARMETIS_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/openmpi_release/debug/cmake
+
+//The directory containing a CMake configuration file for PASTIX.
+PASTIX_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/openmpi_release/debug/cmake
+
+//The directory containing a CMake configuration file for PETSC.
+PETSC_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/openmpi_release/debug/cmake
+
+//The directory containing a CMake configuration file for PTSCOTCH.
+PTSCOTCH_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/openmpi_release/debug/cmake
+
+//The directory containing a CMake configuration file for SCALAPACK.
+SCALAPACK_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/openmpi_release/debug/cmake
+
+//The directory containing a CMake configuration file for SUITESPARSE.
+SUITESPARSE_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/openmpi_release/debug/cmake
+
+//The directory containing a CMake configuration file for SUNDIALS.
+SUNDIALS_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/openmpi_release/debug/cmake
+
+//The directory containing a CMake configuration file for SUPERLU.
+SUPERLU_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/no_mpi/debug/cmake
+
+//The directory containing a CMake configuration file for SUPERLU_DIST.
+SUPERLU_DIST_DIR:PATH=/store/software/opencmiss/dependencies/install/x86_64_linux/gnu-5.4-F5.4/openmpi_release/debug/cmake
+
+//Path to a file.
+X11_ICE_INCLUDE_PATH:PATH=/usr/include
+
+//Path to a library.
+X11_ICE_LIB:FILEPATH=/usr/lib/x86_64-linux-gnu/libICE.so
+
+//Path to a file.
+X11_SM_INCLUDE_PATH:PATH=/usr/include
+
+//Path to a library.
+X11_SM_LIB:FILEPATH=/usr/lib/x86_64-linux-gnu/libSM.so
+
+//Path to a file.
+X11_X11_INCLUDE_PATH:PATH=/usr/include
+
+//Path to a library.
+X11_X11_LIB:FILEPATH=/usr/lib/x86_64-linux-gnu/libX11.so
+
+//Path to a file.
+X11_XRes_INCLUDE_PATH:PATH=/usr/include
+
+//Path to a library.
+X11_XRes_LIB:FILEPATH=/usr/lib/x86_64-linux-gnu/libXRes.so
+
+//Path to a file.
+X11_XShm_INCLUDE_PATH:PATH=/usr/include
+
+//Path to a file.
+X11_XSync_INCLUDE_PATH:PATH=/usr/include
+
+//Path to a file.
+X11_XTest_INCLUDE_PATH:PATH=/usr/include
+
+//Path to a library.
+X11_XTest_LIB:FILEPATH=/usr/lib/x86_64-linux-gnu/libXtst.so
+
+//Path to a file.
+X11_Xaccessrules_INCLUDE_PATH:PATH=/usr/include
+
+//Path to a file.
+X11_Xaccessstr_INCLUDE_PATH:PATH=/usr/include
+
+//Path to a file.
+X11_Xau_INCLUDE_PATH:PATH=/usr/include
+
+//Path to a library.
+X11_Xau_LIB:FILEPATH=/usr/lib/x86_64-linux-gnu/libXau.so
+
+//Path to a file.
+X11_Xcomposite_INCLUDE_PATH:PATH=/usr/include
+
+//Path to a library.
+X11_Xcomposite_LIB:FILEPATH=/usr/lib/x86_64-linux-gnu/libXcomposite.so
+
+//Path to a file.
+X11_Xcursor_INCLUDE_PATH:PATH=/usr/include
+
+//Path to a library.
+X11_Xcursor_LIB:FILEPATH=/usr/lib/x86_64-linux-gnu/libXcursor.so
+
+//Path to a file.
+X11_Xdamage_INCLUDE_PATH:PATH=/usr/include
+
+//Path to a library.
+X11_Xdamage_LIB:FILEPATH=/usr/lib/x86_64-linux-gnu/libXdamage.so
+
+//Path to a file.
+X11_Xdmcp_INCLUDE_PATH:PATH=/usr/include
+
+//Path to a library.
+X11_Xdmcp_LIB:FILEPATH=/usr/lib/x86_64-linux-gnu/libXdmcp.so
+
+//Path to a library.
+X11_Xext_LIB:FILEPATH=/usr/lib/x86_64-linux-gnu/libXext.so
+
+//Path to a file.
+X11_Xfixes_INCLUDE_PATH:PATH=/usr/include
+
+//Path to a library.
+X11_Xfixes_LIB:FILEPATH=/usr/lib/x86_64-linux-gnu/libXfixes.so
+
+//Path to a file.
+X11_Xft_INCLUDE_PATH:PATH=/usr/include
+
+//Path to a library.
+X11_Xft_LIB:FILEPATH=/usr/lib/x86_64-linux-gnu/libXft.so
+
+//Path to a file.
+X11_Xi_INCLUDE_PATH:PATH=/usr/include
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+#define STRINGIFY(X) STRINGIFY_HELPER(X)
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+# endif
+
+#elif defined(__WATCOMC__)
+# if defined(_M_I86)
+#  define ARCHITECTURE_ID "I86"
+
+# elif defined(_M_IX86)
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+
+# else /* unknown architecture */
+#  define ARCHITECTURE_ID ""
+# endif
+
+#else
+#  define ARCHITECTURE_ID ""
+#endif
+
+/* Convert integer to decimal digit literals.  */
+#define DEC(n)                   \
+  ('0' + (((n) / 10000000)%10)), \
+  ('0' + (((n) / 1000000)%10)),  \
+  ('0' + (((n) / 100000)%10)),   \
+  ('0' + (((n) / 10000)%10)),    \
+  ('0' + (((n) / 1000)%10)),     \
+  ('0' + (((n) / 100)%10)),      \
+  ('0' + (((n) / 10)%10)),       \
+  ('0' +  ((n) % 10))
+
+/* Convert integer to hex digit literals.  */
+#define HEX(n)             \
+  ('0' + ((n)>>28 & 0xF)), \
+  ('0' + ((n)>>24 & 0xF)), \
+  ('0' + ((n)>>20 & 0xF)), \
+  ('0' + ((n)>>16 & 0xF)), \
+  ('0' + ((n)>>12 & 0xF)), \
+  ('0' + ((n)>>8  & 0xF)), \
+  ('0' + ((n)>>4  & 0xF)), \
+  ('0' + ((n)     & 0xF))
+
+/* Construct a string literal encoding the version number components. */
+#ifdef COMPILER_VERSION_MAJOR
+char const info_version[] = {
+  'I', 'N', 'F', 'O', ':',
+  'c','o','m','p','i','l','e','r','_','v','e','r','s','i','o','n','[',
+  COMPILER_VERSION_MAJOR,
+# ifdef COMPILER_VERSION_MINOR
+  '.', COMPILER_VERSION_MINOR,
+#  ifdef COMPILER_VERSION_PATCH
+   '.', COMPILER_VERSION_PATCH,
+#   ifdef COMPILER_VERSION_TWEAK
+    '.', COMPILER_VERSION_TWEAK,
+#   endif
+#  endif
+# endif
+  ']','\0'};
+#endif
+
+/* Construct a string literal encoding the version number components. */
+#ifdef SIMULATE_VERSION_MAJOR
+char const info_simulate_version[] = {
+  'I', 'N', 'F', 'O', ':',
+  's','i','m','u','l','a','t','e','_','v','e','r','s','i','o','n','[',
+  SIMULATE_VERSION_MAJOR,
+# ifdef SIMULATE_VERSION_MINOR
+  '.', SIMULATE_VERSION_MINOR,
+#  ifdef SIMULATE_VERSION_PATCH
+   '.', SIMULATE_VERSION_PATCH,
+#   ifdef SIMULATE_VERSION_TWEAK
+    '.', SIMULATE_VERSION_TWEAK,
+#   endif
+#  endif
+# endif
+  ']','\0'};
+#endif
+
+/* Construct the string literal in pieces to prevent the source from
+   getting matched.  Store it in a pointer rather than an array
+   because some compilers will just produce instructions to fill the
+   array rather than assigning a pointer to a static array.  */
+char const* info_platform = "INFO" ":" "platform[" PLATFORM_ID "]";
+char const* info_arch = "INFO" ":" "arch[" ARCHITECTURE_ID "]";
+
+
+
+
+const char* info_language_dialect_default = "INFO" ":" "dialect_default["
+#if !defined(__STDC_VERSION__)
+  "90"
+#elif __STDC_VERSION__ >= 201000L
+  "11"
+#elif __STDC_VERSION__ >= 199901L
+  "99"
+#else
+#endif
+"]";
+
+/*--------------------------------------------------------------------------*/
+
+#ifdef ID_VOID_MAIN
+void main() {}
+#else
+int main(int argc, char* argv[])
+{
+  int require = 0;
+  require += info_compiler[argc];
+  require += info_platform[argc];
+  require += info_arch[argc];
+#ifdef COMPILER_VERSION_MAJOR
+  require += info_version[argc];
+#endif
+#ifdef SIMULATE_ID
+  require += info_simulate[argc];
+#endif
+#ifdef SIMULATE_VERSION_MAJOR
+  require += info_simulate_version[argc];
+#endif
+#if defined(__CRAYXE) || defined(__CRAYXC)
+  require += info_cray[argc];
+#endif
+  require += info_language_dialect_default[argc];
+  (void)argv;
+  return require;
+}
+#endif
diff --git a/FiniteElasticity/RightBiceps/build_debug/CMakeFiles/3.5.1/CompilerIdFortran/CMakeFortranCompilerId.F b/FiniteElasticity/RightBiceps/build_debug/CMakeFiles/3.5.1/CompilerIdFortran/CMakeFortranCompilerId.F
new file mode 100644
index 00000000..0e149618
--- /dev/null
+++ b/FiniteElasticity/RightBiceps/build_debug/CMakeFiles/3.5.1/CompilerIdFortran/CMakeFortranCompilerId.F
@@ -0,0 +1,1048 @@
+      PROGRAM CMakeFortranCompilerId
+#if 0
+! Identify the compiler
+#endif
+#if defined(__INTEL_COMPILER) || defined(__ICC)
+        PRINT *, 'INFO:compiler[Intel]'
+# define COMPILER_VERSION_MAJOR DEC(__INTEL_COMPILER/100)
+# define COMPILER_VERSION_MINOR DEC(__INTEL_COMPILER/10 % 10)
+# if defined(__INTEL_COMPILER_UPDATE)
+#  define COMPILER_VERSION_PATCH DEC(__INTEL_COMPILER_UPDATE)
+# else
+#  define COMPILER_VERSION_PATCH DEC(__INTEL_COMPILER   % 10)
+# endif
+# if defined(__INTEL_COMPILER_BUILD_DATE)
+#  define COMPILER_VERSION_TWEAK DEC(__INTEL_COMPILER_BUILD_DATE)
+# endif
+
+# if defined(_MSC_VER)
+        PRINT *, 'INFO:simulate[MSVC]'
+#  if _MSC_VER >= 1900
+        PRINT *, 'INFO:simulate_version[019.00]'
+#  elif _MSC_VER >= 1800
+        PRINT *, 'INFO:simulate_version[018.00]'
+#  elif _MSC_VER >= 1700
+        PRINT *, 'INFO:simulate_version[017.00]'
+#  elif _MSC_VER >= 1600
+        PRINT *, 'INFO:simulate_version[016.00]'
+#  elif _MSC_VER >= 1500
+        PRINT *, 'INFO:simulate_version[015.00]'
+#  elif _MSC_VER >= 1400
+        PRINT *, 'INFO:simulate_version[014.00]'
+#  elif _MSC_VER >= 1310
+        PRINT *, 'INFO:simulate_version[013.01]'
+#  else
+        PRINT *, 'INFO:simulate_version[013.00]'
+#  endif
+# endif
+#elif defined(__SUNPRO_F95)
+        PRINT *, 'INFO:compiler[SunPro]'
+# define COMPILER_VERSION_MAJOR HEX(__SUNPRO_F95>>8)
+# define COMPILER_VERSION_MINOR HEX(__SUNPRO_F95>>4 & 0xF)
+# define COMPILER_VERSION_PATCH HEX(__SUNPRO_F95    & 0xF)
+#elif defined(__SUNPRO_F90)
+        PRINT *, 'INFO:compiler[SunPro]'
+# define COMPILER_VERSION_MAJOR HEX(__SUNPRO_F90>>8)
+# define COMPILER_VERSION_MINOR HEX(__SUNPRO_F90>>4 & 0xF)
+# define COMPILER_VERSION_PATCH HEX(__SUNPRO_F90    & 0xF)
+#elif defined(_CRAYFTN)
+        PRINT *, 'INFO:compiler[Cray]'
+# define COMPILER_VERSION_MAJOR DEC(_RELEASE_MAJOR)
+# define COMPILER_VERSION_MINOR DEC(_RELEASE_MINOR)
+#elif defined(__G95__)
+        PRINT *, 'INFO:compiler[G95]'
+# define COMPILER_VERSION_MAJOR DEC(__G95__)
+# define COMPILER_VERSION_MINOR DEC(__G95_MINOR__)
+#elif defined(__PATHSCALE__)
+        PRINT *, 'INFO:compiler[PathScale]'
+# define COMPILER_VERSION_MAJOR DEC(__PATHCC__)
+# define COMPILER_VERSION_MINOR DEC(__PATHCC_MINOR__)
+# if defined(__PATHCC_PATCHLEVEL__)
+#  define COMPILER_VERSION_PATCH DEC(__PATHCC_PATCHLEVEL__)
+# endif
+#elif defined(__ABSOFT__)
+        PRINT *, 'INFO:compiler[Absoft]'
+#elif defined(__GNUC__)
+        PRINT *, 'INFO:compiler[GNU]'
+# define COMPILER_VERSION_MAJOR DEC(__GNUC__)
+# define COMPILER_VERSION_MINOR DEC(__GNUC_MINOR__)
+# if defined(__GNUC_PATCHLEVEL__)
+#  define COMPILER_VERSION_PATCH DEC(__GNUC_PATCHLEVEL__)
+# endif
+#elif defined(__IBMC__)
+# if defined(__COMPILER_VER__)
+        PRINT *, 'INFO:compiler[zOS]'
+# elif __IBMC__ >= 800
+        PRINT *, 'INFO:compiler[XL]'
+#  define COMPILER_VERSION_MAJOR DEC(__IBMC__/100)
+#  define COMPILER_VERSION_MINOR DEC(__IBMC__/10 % 10)
+#  define COMPILER_VERSION_PATCH DEC(__IBMC__    % 10)
+# else
+        PRINT *, 'INFO:compiler[VisualAge]'
+#  define COMPILER_VERSION_MAJOR DEC(__IBMC__/100)
+#  define COMPILER_VERSION_MINOR DEC(__IBMC__/10 % 10)
+#  define COMPILER_VERSION_PATCH DEC(__IBMC__    % 10)
+# endif
+#elif defined(__PGI)
+        PRINT *, 'INFO:compiler[PGI]'
+# define COMPILER_VERSION_MAJOR DEC(__PGIC__)
+# define COMPILER_VERSION_MINOR DEC(__PGIC_MINOR__)
+# if defined(__PGIC_PATCHLEVEL__)
+#  define COMPILER_VERSION_PATCH DEC(__PGIC_PATCHLEVEL__)
+# endif
+#elif defined(_SGI_COMPILER_VERSION) || defined(_COMPILER_VERSION)
+        PRINT *, 'INFO:compiler[MIPSpro]'
+#       if 0
+!       This compiler is either not known or is too old to define an
+!       identification macro.  Try to identify the platform and guess that
+!       it is the native compiler.
+#       endif
+#elif defined(_AIX) || defined(__AIX) || defined(__AIX__) || defined(__aix) || defined(__aix__)
+        PRINT *, 'INFO:compiler[VisualAge]'
+#elif defined(__sgi) || defined(__sgi__) || defined(_SGI)
+        PRINT *, 'INFO:compiler[MIPSpro]'
+#elif defined(__hpux) || defined(__hpux__)
+        PRINT *, 'INFO:compiler[HP]'
+#elif 1
+#       if 0
+!       The above 'elif 1' instead of 'else' is to work around a bug in the
+!       SGI preprocessor which produces both the __sgi and else blocks.
+#       endif
+        PRINT *, 'INFO:compiler[]'
+#endif
+#if defined(__CRAYXE) || defined(__CRAYXC)
+        PRINT *, 'INFO:compiler_wrapper[CrayPrgEnv]'
+#endif
+
+#if 0
+! Identify the platform
+#endif
+#if defined(__linux) || defined(__linux__) || defined(linux)
+        PRINT *, 'INFO:platform[Linux]'
+#elif defined(__CYGWIN__)
+        PRINT *, 'INFO:platform[Cygwin]'
+#elif defined(__MINGW32__)
+        PRINT *, 'INFO:platform[MinGW]'
+#elif defined(__APPLE__)
+        PRINT *, 'INFO:platform[Darwin]'
+#elif defined(_WIN32) || defined(__WIN32__) || defined(WIN32)
+        PRINT *, 'INFO:platform[Windows]'
+#elif defined(__FreeBSD__) || defined(__FreeBSD)
+        PRINT *, 'INFO:platform[FreeBSD]'
+#elif defined(__NetBSD__) || defined(__NetBSD)
+        PRINT *, 'INFO:platform[NetBSD]'
+#elif defined(__OpenBSD__) || defined(__OPENBSD)
+        PRINT *, 'INFO:platform[OpenBSD]'
+#elif defined(__sun) || defined(sun)
+        PRINT *, 'INFO:platform[SunOS]'
+#elif defined(_AIX) || defined(__AIX) || defined(__AIX__) || defined(__aix) || defined(__aix__)
+        PRINT *, 'INFO:platform[AIX]'
+#elif defined(__sgi) || defined(__sgi__) || defined(_SGI)
+        PRINT *, 'INFO:platform[IRIX]'
+#elif defined(__hpux) || defined(__hpux__)
+        PRINT *, 'INFO:platform[HP-UX]'
+#elif defined(__HAIKU__)
+        PRINT *, 'INFO:platform[Haiku]'
+#elif defined(__BeOS) || defined(__BEOS__) || defined(_BEOS)
+        PRINT *, 'INFO:platform[BeOS]'
+#elif defined(__QNX__) || defined(__QNXNTO__)
+        PRINT *, 'INFO:platform[QNX]'
+#elif defined(__tru64) || defined(_tru64) || defined(__TRU64__)
+        PRINT *, 'INFO:platform[Tru64]'
+#elif defined(__riscos) || defined(__riscos__)
+        PRINT *, 'INFO:platform[RISCos]'
+#elif defined(__sinix) || defined(__sinix__) || defined(__SINIX__)
+        PRINT *, 'INFO:platform[SINIX]'
+#elif defined(__UNIX_SV__)
+        PRINT *, 'INFO:platform[UNIX_SV]'
+#elif defined(__bsdos__)
+        PRINT *, 'INFO:platform[BSDOS]'
+#elif defined(_MPRAS) || defined(MPRAS)
+        PRINT *, 'INFO:platform[MP-RAS]'
+#elif defined(__osf) || defined(__osf__)
+        PRINT *, 'INFO:platform[OSF1]'
+#elif defined(_SCO_SV) || defined(SCO_SV) || defined(sco_sv)
+        PRINT *, 'INFO:platform[SCO_SV]'
+#elif defined(__ultrix) || defined(__ultrix__) || defined(_ULTRIX)
+        PRINT *, 'INFO:platform[ULTRIX]'
+#elif defined(__XENIX__) || defined(_XENIX) || defined(XENIX)
+        PRINT *, 'INFO:platform[Xenix]'
+#elif 1
+#       if 0
+!       The above 'elif 1' instead of 'else' is to work around a bug in the
+!       SGI preprocessor which produces both the __sgi and else blocks.
+#       endif
+        PRINT *, 'INFO:platform[]'
+#endif
+#if defined(_WIN32) && (defined(__INTEL_COMPILER) || defined(__ICC))
+# if defined(_M_IA64)
+        PRINT *, 'INFO:arch[IA64]'
+# elif defined(_M_X64) || defined(_M_AMD64)
+        PRINT *, 'INFO:arch[x64]'
+# elif defined(_M_IX86)
+        PRINT *, 'INFO:arch[X86]'
+# endif
+#endif
+
+#if 0
+! Encode compiler version digits
+#endif
+#define DEC_8(n) (((n) / 10000000) % 10)
+#define DEC_7(n) (((n) / 1000000)  % 10)
+#define DEC_6(n) (((n) / 100000)   % 10)
+#define DEC_5(n) (((n) / 10000)    % 10)
+#define DEC_4(n) (((n) / 1000)     % 10)
+#define DEC_3(n) (((n) / 100)      % 10)
+#define DEC_2(n) (((n) / 10)       % 10)
+#define DEC_1(n) (((n)    )        % 10)
+#define HEX_8(n) ((n)>>28 & 0xF)
+#define HEX_7(n) ((n)>>24 & 0xF)
+#define HEX_6(n) ((n)>>20 & 0xF)
+#define HEX_5(n) ((n)>>16 & 0xF)
+#define HEX_4(n) ((n)>>12 & 0xF)
+#define HEX_3(n) ((n)>>8  & 0xF)
+#define HEX_2(n) ((n)>>4  & 0xF)
+#define HEX_1(n) ((n)     & 0xF)
+
+#if defined(COMPILER_VERSION_MAJOR)
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_1(n)
+# define HEX(n) HEX_1(n)
+# if COMPILER_VERSION_MAJOR == 0
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_1[0]'
+# elif COMPILER_VERSION_MAJOR == 1
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_1[1]'
+# elif COMPILER_VERSION_MAJOR == 2
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_1[2]'
+# elif COMPILER_VERSION_MAJOR == 3
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_1[3]'
+# elif COMPILER_VERSION_MAJOR == 4
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_1[4]'
+# elif COMPILER_VERSION_MAJOR == 5
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_1[5]'
+# elif COMPILER_VERSION_MAJOR == 6
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_1[6]'
+# elif COMPILER_VERSION_MAJOR == 7
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_1[7]'
+# elif COMPILER_VERSION_MAJOR == 8
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_1[8]'
+# elif COMPILER_VERSION_MAJOR == 9
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_1[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_2(n)
+# define HEX(n) HEX_2(n)
+# if COMPILER_VERSION_MAJOR == 0
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_2[0]'
+# elif COMPILER_VERSION_MAJOR == 1
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_2[1]'
+# elif COMPILER_VERSION_MAJOR == 2
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_2[2]'
+# elif COMPILER_VERSION_MAJOR == 3
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_2[3]'
+# elif COMPILER_VERSION_MAJOR == 4
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_2[4]'
+# elif COMPILER_VERSION_MAJOR == 5
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_2[5]'
+# elif COMPILER_VERSION_MAJOR == 6
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_2[6]'
+# elif COMPILER_VERSION_MAJOR == 7
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_2[7]'
+# elif COMPILER_VERSION_MAJOR == 8
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_2[8]'
+# elif COMPILER_VERSION_MAJOR == 9
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_2[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_3(n)
+# define HEX(n) HEX_3(n)
+# if COMPILER_VERSION_MAJOR == 0
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_3[0]'
+# elif COMPILER_VERSION_MAJOR == 1
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_3[1]'
+# elif COMPILER_VERSION_MAJOR == 2
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_3[2]'
+# elif COMPILER_VERSION_MAJOR == 3
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_3[3]'
+# elif COMPILER_VERSION_MAJOR == 4
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_3[4]'
+# elif COMPILER_VERSION_MAJOR == 5
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_3[5]'
+# elif COMPILER_VERSION_MAJOR == 6
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_3[6]'
+# elif COMPILER_VERSION_MAJOR == 7
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_3[7]'
+# elif COMPILER_VERSION_MAJOR == 8
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_3[8]'
+# elif COMPILER_VERSION_MAJOR == 9
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_3[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_4(n)
+# define HEX(n) HEX_4(n)
+# if COMPILER_VERSION_MAJOR == 0
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_4[0]'
+# elif COMPILER_VERSION_MAJOR == 1
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_4[1]'
+# elif COMPILER_VERSION_MAJOR == 2
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_4[2]'
+# elif COMPILER_VERSION_MAJOR == 3
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_4[3]'
+# elif COMPILER_VERSION_MAJOR == 4
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_4[4]'
+# elif COMPILER_VERSION_MAJOR == 5
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_4[5]'
+# elif COMPILER_VERSION_MAJOR == 6
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_4[6]'
+# elif COMPILER_VERSION_MAJOR == 7
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_4[7]'
+# elif COMPILER_VERSION_MAJOR == 8
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_4[8]'
+# elif COMPILER_VERSION_MAJOR == 9
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_4[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_5(n)
+# define HEX(n) HEX_5(n)
+# if COMPILER_VERSION_MAJOR == 0
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_5[0]'
+# elif COMPILER_VERSION_MAJOR == 1
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_5[1]'
+# elif COMPILER_VERSION_MAJOR == 2
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_5[2]'
+# elif COMPILER_VERSION_MAJOR == 3
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_5[3]'
+# elif COMPILER_VERSION_MAJOR == 4
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_5[4]'
+# elif COMPILER_VERSION_MAJOR == 5
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_5[5]'
+# elif COMPILER_VERSION_MAJOR == 6
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_5[6]'
+# elif COMPILER_VERSION_MAJOR == 7
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_5[7]'
+# elif COMPILER_VERSION_MAJOR == 8
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_5[8]'
+# elif COMPILER_VERSION_MAJOR == 9
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_5[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_6(n)
+# define HEX(n) HEX_6(n)
+# if COMPILER_VERSION_MAJOR == 0
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_6[0]'
+# elif COMPILER_VERSION_MAJOR == 1
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_6[1]'
+# elif COMPILER_VERSION_MAJOR == 2
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_6[2]'
+# elif COMPILER_VERSION_MAJOR == 3
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_6[3]'
+# elif COMPILER_VERSION_MAJOR == 4
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_6[4]'
+# elif COMPILER_VERSION_MAJOR == 5
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_6[5]'
+# elif COMPILER_VERSION_MAJOR == 6
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_6[6]'
+# elif COMPILER_VERSION_MAJOR == 7
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_6[7]'
+# elif COMPILER_VERSION_MAJOR == 8
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_6[8]'
+# elif COMPILER_VERSION_MAJOR == 9
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_6[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_7(n)
+# define HEX(n) HEX_7(n)
+# if COMPILER_VERSION_MAJOR == 0
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_7[0]'
+# elif COMPILER_VERSION_MAJOR == 1
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_7[1]'
+# elif COMPILER_VERSION_MAJOR == 2
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_7[2]'
+# elif COMPILER_VERSION_MAJOR == 3
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_7[3]'
+# elif COMPILER_VERSION_MAJOR == 4
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_7[4]'
+# elif COMPILER_VERSION_MAJOR == 5
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_7[5]'
+# elif COMPILER_VERSION_MAJOR == 6
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_7[6]'
+# elif COMPILER_VERSION_MAJOR == 7
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_7[7]'
+# elif COMPILER_VERSION_MAJOR == 8
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_7[8]'
+# elif COMPILER_VERSION_MAJOR == 9
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_7[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_8(n)
+# define HEX(n) HEX_8(n)
+# if COMPILER_VERSION_MAJOR == 0
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_8[0]'
+# elif COMPILER_VERSION_MAJOR == 1
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_8[1]'
+# elif COMPILER_VERSION_MAJOR == 2
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_8[2]'
+# elif COMPILER_VERSION_MAJOR == 3
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_8[3]'
+# elif COMPILER_VERSION_MAJOR == 4
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_8[4]'
+# elif COMPILER_VERSION_MAJOR == 5
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_8[5]'
+# elif COMPILER_VERSION_MAJOR == 6
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_8[6]'
+# elif COMPILER_VERSION_MAJOR == 7
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_8[7]'
+# elif COMPILER_VERSION_MAJOR == 8
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_8[8]'
+# elif COMPILER_VERSION_MAJOR == 9
+        PRINT *, 'INFO:compiler_version_MAJOR_digit_8[9]'
+# endif
+
+#endif
+#if defined(COMPILER_VERSION_MINOR)
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_1(n)
+# define HEX(n) HEX_1(n)
+# if COMPILER_VERSION_MINOR == 0
+        PRINT *, 'INFO:compiler_version_MINOR_digit_1[0]'
+# elif COMPILER_VERSION_MINOR == 1
+        PRINT *, 'INFO:compiler_version_MINOR_digit_1[1]'
+# elif COMPILER_VERSION_MINOR == 2
+        PRINT *, 'INFO:compiler_version_MINOR_digit_1[2]'
+# elif COMPILER_VERSION_MINOR == 3
+        PRINT *, 'INFO:compiler_version_MINOR_digit_1[3]'
+# elif COMPILER_VERSION_MINOR == 4
+        PRINT *, 'INFO:compiler_version_MINOR_digit_1[4]'
+# elif COMPILER_VERSION_MINOR == 5
+        PRINT *, 'INFO:compiler_version_MINOR_digit_1[5]'
+# elif COMPILER_VERSION_MINOR == 6
+        PRINT *, 'INFO:compiler_version_MINOR_digit_1[6]'
+# elif COMPILER_VERSION_MINOR == 7
+        PRINT *, 'INFO:compiler_version_MINOR_digit_1[7]'
+# elif COMPILER_VERSION_MINOR == 8
+        PRINT *, 'INFO:compiler_version_MINOR_digit_1[8]'
+# elif COMPILER_VERSION_MINOR == 9
+        PRINT *, 'INFO:compiler_version_MINOR_digit_1[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_2(n)
+# define HEX(n) HEX_2(n)
+# if COMPILER_VERSION_MINOR == 0
+        PRINT *, 'INFO:compiler_version_MINOR_digit_2[0]'
+# elif COMPILER_VERSION_MINOR == 1
+        PRINT *, 'INFO:compiler_version_MINOR_digit_2[1]'
+# elif COMPILER_VERSION_MINOR == 2
+        PRINT *, 'INFO:compiler_version_MINOR_digit_2[2]'
+# elif COMPILER_VERSION_MINOR == 3
+        PRINT *, 'INFO:compiler_version_MINOR_digit_2[3]'
+# elif COMPILER_VERSION_MINOR == 4
+        PRINT *, 'INFO:compiler_version_MINOR_digit_2[4]'
+# elif COMPILER_VERSION_MINOR == 5
+        PRINT *, 'INFO:compiler_version_MINOR_digit_2[5]'
+# elif COMPILER_VERSION_MINOR == 6
+        PRINT *, 'INFO:compiler_version_MINOR_digit_2[6]'
+# elif COMPILER_VERSION_MINOR == 7
+        PRINT *, 'INFO:compiler_version_MINOR_digit_2[7]'
+# elif COMPILER_VERSION_MINOR == 8
+        PRINT *, 'INFO:compiler_version_MINOR_digit_2[8]'
+# elif COMPILER_VERSION_MINOR == 9
+        PRINT *, 'INFO:compiler_version_MINOR_digit_2[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_3(n)
+# define HEX(n) HEX_3(n)
+# if COMPILER_VERSION_MINOR == 0
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[0]'
+# elif COMPILER_VERSION_MINOR == 1
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[1]'
+# elif COMPILER_VERSION_MINOR == 2
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[2]'
+# elif COMPILER_VERSION_MINOR == 3
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[3]'
+# elif COMPILER_VERSION_MINOR == 4
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[4]'
+# elif COMPILER_VERSION_MINOR == 5
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[5]'
+# elif COMPILER_VERSION_MINOR == 6
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[6]'
+# elif COMPILER_VERSION_MINOR == 7
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[7]'
+# elif COMPILER_VERSION_MINOR == 8
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[8]'
+# elif COMPILER_VERSION_MINOR == 9
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_4(n)
+# define HEX(n) HEX_4(n)
+# if COMPILER_VERSION_MINOR == 0
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[0]'
+# elif COMPILER_VERSION_MINOR == 1
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[1]'
+# elif COMPILER_VERSION_MINOR == 2
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[2]'
+# elif COMPILER_VERSION_MINOR == 3
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[3]'
+# elif COMPILER_VERSION_MINOR == 4
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[4]'
+# elif COMPILER_VERSION_MINOR == 5
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[5]'
+# elif COMPILER_VERSION_MINOR == 6
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[6]'
+# elif COMPILER_VERSION_MINOR == 7
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[7]'
+# elif COMPILER_VERSION_MINOR == 8
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[8]'
+# elif COMPILER_VERSION_MINOR == 9
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_5(n)
+# define HEX(n) HEX_5(n)
+# if COMPILER_VERSION_MINOR == 0
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[0]'
+# elif COMPILER_VERSION_MINOR == 1
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[1]'
+# elif COMPILER_VERSION_MINOR == 2
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[2]'
+# elif COMPILER_VERSION_MINOR == 3
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[3]'
+# elif COMPILER_VERSION_MINOR == 4
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[4]'
+# elif COMPILER_VERSION_MINOR == 5
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[5]'
+# elif COMPILER_VERSION_MINOR == 6
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[6]'
+# elif COMPILER_VERSION_MINOR == 7
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[7]'
+# elif COMPILER_VERSION_MINOR == 8
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[8]'
+# elif COMPILER_VERSION_MINOR == 9
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_6(n)
+# define HEX(n) HEX_6(n)
+# if COMPILER_VERSION_MINOR == 0
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[0]'
+# elif COMPILER_VERSION_MINOR == 1
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[1]'
+# elif COMPILER_VERSION_MINOR == 2
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[2]'
+# elif COMPILER_VERSION_MINOR == 3
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[3]'
+# elif COMPILER_VERSION_MINOR == 4
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[4]'
+# elif COMPILER_VERSION_MINOR == 5
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[5]'
+# elif COMPILER_VERSION_MINOR == 6
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[6]'
+# elif COMPILER_VERSION_MINOR == 7
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[7]'
+# elif COMPILER_VERSION_MINOR == 8
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[8]'
+# elif COMPILER_VERSION_MINOR == 9
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_7(n)
+# define HEX(n) HEX_7(n)
+# if COMPILER_VERSION_MINOR == 0
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[0]'
+# elif COMPILER_VERSION_MINOR == 1
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[1]'
+# elif COMPILER_VERSION_MINOR == 2
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[2]'
+# elif COMPILER_VERSION_MINOR == 3
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[3]'
+# elif COMPILER_VERSION_MINOR == 4
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[4]'
+# elif COMPILER_VERSION_MINOR == 5
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[5]'
+# elif COMPILER_VERSION_MINOR == 6
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[6]'
+# elif COMPILER_VERSION_MINOR == 7
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[7]'
+# elif COMPILER_VERSION_MINOR == 8
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[8]'
+# elif COMPILER_VERSION_MINOR == 9
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_8(n)
+# define HEX(n) HEX_8(n)
+# if COMPILER_VERSION_MINOR == 0
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[0]'
+# elif COMPILER_VERSION_MINOR == 1
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[1]'
+# elif COMPILER_VERSION_MINOR == 2
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[2]'
+# elif COMPILER_VERSION_MINOR == 3
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[3]'
+# elif COMPILER_VERSION_MINOR == 4
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[4]'
+# elif COMPILER_VERSION_MINOR == 5
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[5]'
+# elif COMPILER_VERSION_MINOR == 6
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[6]'
+# elif COMPILER_VERSION_MINOR == 7
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[7]'
+# elif COMPILER_VERSION_MINOR == 8
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[8]'
+# elif COMPILER_VERSION_MINOR == 9
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[9]'
+# endif
+
+#endif
+#if defined(COMPILER_VERSION_PATCH)
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_1(n)
+# define HEX(n) HEX_1(n)
+# if COMPILER_VERSION_PATCH == 0
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[0]'
+# elif COMPILER_VERSION_PATCH == 1
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[1]'
+# elif COMPILER_VERSION_PATCH == 2
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[2]'
+# elif COMPILER_VERSION_PATCH == 3
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[3]'
+# elif COMPILER_VERSION_PATCH == 4
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[4]'
+# elif COMPILER_VERSION_PATCH == 5
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[5]'
+# elif COMPILER_VERSION_PATCH == 6
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[6]'
+# elif COMPILER_VERSION_PATCH == 7
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[7]'
+# elif COMPILER_VERSION_PATCH == 8
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[8]'
+# elif COMPILER_VERSION_PATCH == 9
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_2(n)
+# define HEX(n) HEX_2(n)
+# if COMPILER_VERSION_PATCH == 0
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[0]'
+# elif COMPILER_VERSION_PATCH == 1
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[1]'
+# elif COMPILER_VERSION_PATCH == 2
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[2]'
+# elif COMPILER_VERSION_PATCH == 3
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[3]'
+# elif COMPILER_VERSION_PATCH == 4
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[4]'
+# elif COMPILER_VERSION_PATCH == 5
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[5]'
+# elif COMPILER_VERSION_PATCH == 6
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[6]'
+# elif COMPILER_VERSION_PATCH == 7
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[7]'
+# elif COMPILER_VERSION_PATCH == 8
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[8]'
+# elif COMPILER_VERSION_PATCH == 9
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_3(n)
+# define HEX(n) HEX_3(n)
+# if COMPILER_VERSION_PATCH == 0
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[0]'
+# elif COMPILER_VERSION_PATCH == 1
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[1]'
+# elif COMPILER_VERSION_PATCH == 2
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[2]'
+# elif COMPILER_VERSION_PATCH == 3
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[3]'
+# elif COMPILER_VERSION_PATCH == 4
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[4]'
+# elif COMPILER_VERSION_PATCH == 5
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[5]'
+# elif COMPILER_VERSION_PATCH == 6
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[6]'
+# elif COMPILER_VERSION_PATCH == 7
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[7]'
+# elif COMPILER_VERSION_PATCH == 8
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[8]'
+# elif COMPILER_VERSION_PATCH == 9
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_4(n)
+# define HEX(n) HEX_4(n)
+# if COMPILER_VERSION_PATCH == 0
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[0]'
+# elif COMPILER_VERSION_PATCH == 1
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[1]'
+# elif COMPILER_VERSION_PATCH == 2
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[2]'
+# elif COMPILER_VERSION_PATCH == 3
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[3]'
+# elif COMPILER_VERSION_PATCH == 4
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[4]'
+# elif COMPILER_VERSION_PATCH == 5
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[5]'
+# elif COMPILER_VERSION_PATCH == 6
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[6]'
+# elif COMPILER_VERSION_PATCH == 7
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[7]'
+# elif COMPILER_VERSION_PATCH == 8
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[8]'
+# elif COMPILER_VERSION_PATCH == 9
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_5(n)
+# define HEX(n) HEX_5(n)
+# if COMPILER_VERSION_PATCH == 0
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[0]'
+# elif COMPILER_VERSION_PATCH == 1
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[1]'
+# elif COMPILER_VERSION_PATCH == 2
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[2]'
+# elif COMPILER_VERSION_PATCH == 3
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[3]'
+# elif COMPILER_VERSION_PATCH == 4
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[4]'
+# elif COMPILER_VERSION_PATCH == 5
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[5]'
+# elif COMPILER_VERSION_PATCH == 6
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[6]'
+# elif COMPILER_VERSION_PATCH == 7
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[7]'
+# elif COMPILER_VERSION_PATCH == 8
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[8]'
+# elif COMPILER_VERSION_PATCH == 9
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_6(n)
+# define HEX(n) HEX_6(n)
+# if COMPILER_VERSION_PATCH == 0
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[0]'
+# elif COMPILER_VERSION_PATCH == 1
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[1]'
+# elif COMPILER_VERSION_PATCH == 2
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[2]'
+# elif COMPILER_VERSION_PATCH == 3
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[3]'
+# elif COMPILER_VERSION_PATCH == 4
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[4]'
+# elif COMPILER_VERSION_PATCH == 5
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[5]'
+# elif COMPILER_VERSION_PATCH == 6
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[6]'
+# elif COMPILER_VERSION_PATCH == 7
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[7]'
+# elif COMPILER_VERSION_PATCH == 8
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[8]'
+# elif COMPILER_VERSION_PATCH == 9
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_7(n)
+# define HEX(n) HEX_7(n)
+# if COMPILER_VERSION_PATCH == 0
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[0]'
+# elif COMPILER_VERSION_PATCH == 1
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[1]'
+# elif COMPILER_VERSION_PATCH == 2
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[2]'
+# elif COMPILER_VERSION_PATCH == 3
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[3]'
+# elif COMPILER_VERSION_PATCH == 4
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[4]'
+# elif COMPILER_VERSION_PATCH == 5
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[5]'
+# elif COMPILER_VERSION_PATCH == 6
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[6]'
+# elif COMPILER_VERSION_PATCH == 7
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[7]'
+# elif COMPILER_VERSION_PATCH == 8
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[8]'
+# elif COMPILER_VERSION_PATCH == 9
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_8(n)
+# define HEX(n) HEX_8(n)
+# if COMPILER_VERSION_PATCH == 0
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[0]'
+# elif COMPILER_VERSION_PATCH == 1
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[1]'
+# elif COMPILER_VERSION_PATCH == 2
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[2]'
+# elif COMPILER_VERSION_PATCH == 3
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[3]'
+# elif COMPILER_VERSION_PATCH == 4
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[4]'
+# elif COMPILER_VERSION_PATCH == 5
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[5]'
+# elif COMPILER_VERSION_PATCH == 6
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[6]'
+# elif COMPILER_VERSION_PATCH == 7
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[7]'
+# elif COMPILER_VERSION_PATCH == 8
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[8]'
+# elif COMPILER_VERSION_PATCH == 9
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[9]'
+# endif
+
+#endif
+#if defined(COMPILER_VERSION_TWEAK)
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_1(n)
+# define HEX(n) HEX_1(n)
+# if COMPILER_VERSION_TWEAK == 0
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[0]'
+# elif COMPILER_VERSION_TWEAK == 1
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[1]'
+# elif COMPILER_VERSION_TWEAK == 2
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[2]'
+# elif COMPILER_VERSION_TWEAK == 3
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[3]'
+# elif COMPILER_VERSION_TWEAK == 4
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[4]'
+# elif COMPILER_VERSION_TWEAK == 5
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[5]'
+# elif COMPILER_VERSION_TWEAK == 6
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[6]'
+# elif COMPILER_VERSION_TWEAK == 7
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[7]'
+# elif COMPILER_VERSION_TWEAK == 8
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[8]'
+# elif COMPILER_VERSION_TWEAK == 9
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_2(n)
+# define HEX(n) HEX_2(n)
+# if COMPILER_VERSION_TWEAK == 0
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[0]'
+# elif COMPILER_VERSION_TWEAK == 1
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[1]'
+# elif COMPILER_VERSION_TWEAK == 2
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[2]'
+# elif COMPILER_VERSION_TWEAK == 3
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[3]'
+# elif COMPILER_VERSION_TWEAK == 4
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[4]'
+# elif COMPILER_VERSION_TWEAK == 5
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[5]'
+# elif COMPILER_VERSION_TWEAK == 6
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[6]'
+# elif COMPILER_VERSION_TWEAK == 7
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[7]'
+# elif COMPILER_VERSION_TWEAK == 8
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[8]'
+# elif COMPILER_VERSION_TWEAK == 9
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_3(n)
+# define HEX(n) HEX_3(n)
+# if COMPILER_VERSION_TWEAK == 0
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[0]'
+# elif COMPILER_VERSION_TWEAK == 1
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[1]'
+# elif COMPILER_VERSION_TWEAK == 2
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[2]'
+# elif COMPILER_VERSION_TWEAK == 3
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[3]'
+# elif COMPILER_VERSION_TWEAK == 4
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[4]'
+# elif COMPILER_VERSION_TWEAK == 5
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[5]'
+# elif COMPILER_VERSION_TWEAK == 6
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[6]'
+# elif COMPILER_VERSION_TWEAK == 7
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[7]'
+# elif COMPILER_VERSION_TWEAK == 8
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[8]'
+# elif COMPILER_VERSION_TWEAK == 9
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_4(n)
+# define HEX(n) HEX_4(n)
+# if COMPILER_VERSION_TWEAK == 0
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[0]'
+# elif COMPILER_VERSION_TWEAK == 1
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[1]'
+# elif COMPILER_VERSION_TWEAK == 2
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[2]'
+# elif COMPILER_VERSION_TWEAK == 3
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[3]'
+# elif COMPILER_VERSION_TWEAK == 4
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[4]'
+# elif COMPILER_VERSION_TWEAK == 5
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[5]'
+# elif COMPILER_VERSION_TWEAK == 6
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[6]'
+# elif COMPILER_VERSION_TWEAK == 7
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[7]'
+# elif COMPILER_VERSION_TWEAK == 8
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[8]'
+# elif COMPILER_VERSION_TWEAK == 9
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_5(n)
+# define HEX(n) HEX_5(n)
+# if COMPILER_VERSION_TWEAK == 0
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_5[0]'
+# elif COMPILER_VERSION_TWEAK == 1
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_5[1]'
+# elif COMPILER_VERSION_TWEAK == 2
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_5[2]'
+# elif COMPILER_VERSION_TWEAK == 3
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_5[3]'
+# elif COMPILER_VERSION_TWEAK == 4
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_5[4]'
+# elif COMPILER_VERSION_TWEAK == 5
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_5[5]'
+# elif COMPILER_VERSION_TWEAK == 6
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_5[6]'
+# elif COMPILER_VERSION_TWEAK == 7
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_5[7]'
+# elif COMPILER_VERSION_TWEAK == 8
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_5[8]'
+# elif COMPILER_VERSION_TWEAK == 9
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_5[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_6(n)
+# define HEX(n) HEX_6(n)
+# if COMPILER_VERSION_TWEAK == 0
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_6[0]'
+# elif COMPILER_VERSION_TWEAK == 1
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_6[1]'
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+set(CMAKE_MAKEFILE_OUTPUTS
+  "Makefile"
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diff --git a/FiniteElasticity/RightBiceps/build_debug/CMakeFiles/Makefile2 b/FiniteElasticity/RightBiceps/build_debug/CMakeFiles/Makefile2
new file mode 100644
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new file mode 100644
index 00000000..3889dd84
--- /dev/null
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new file mode 100644
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+# elif COMPILER_VERSION_MINOR == 5
+        PRINT *, 'INFO:compiler_version_MINOR_digit_2[5]'
+# elif COMPILER_VERSION_MINOR == 6
+        PRINT *, 'INFO:compiler_version_MINOR_digit_2[6]'
+# elif COMPILER_VERSION_MINOR == 7
+        PRINT *, 'INFO:compiler_version_MINOR_digit_2[7]'
+# elif COMPILER_VERSION_MINOR == 8
+        PRINT *, 'INFO:compiler_version_MINOR_digit_2[8]'
+# elif COMPILER_VERSION_MINOR == 9
+        PRINT *, 'INFO:compiler_version_MINOR_digit_2[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_3(n)
+# define HEX(n) HEX_3(n)
+# if COMPILER_VERSION_MINOR == 0
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[0]'
+# elif COMPILER_VERSION_MINOR == 1
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[1]'
+# elif COMPILER_VERSION_MINOR == 2
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[2]'
+# elif COMPILER_VERSION_MINOR == 3
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[3]'
+# elif COMPILER_VERSION_MINOR == 4
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[4]'
+# elif COMPILER_VERSION_MINOR == 5
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[5]'
+# elif COMPILER_VERSION_MINOR == 6
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[6]'
+# elif COMPILER_VERSION_MINOR == 7
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[7]'
+# elif COMPILER_VERSION_MINOR == 8
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[8]'
+# elif COMPILER_VERSION_MINOR == 9
+        PRINT *, 'INFO:compiler_version_MINOR_digit_3[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_4(n)
+# define HEX(n) HEX_4(n)
+# if COMPILER_VERSION_MINOR == 0
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[0]'
+# elif COMPILER_VERSION_MINOR == 1
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[1]'
+# elif COMPILER_VERSION_MINOR == 2
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[2]'
+# elif COMPILER_VERSION_MINOR == 3
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[3]'
+# elif COMPILER_VERSION_MINOR == 4
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[4]'
+# elif COMPILER_VERSION_MINOR == 5
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[5]'
+# elif COMPILER_VERSION_MINOR == 6
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[6]'
+# elif COMPILER_VERSION_MINOR == 7
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[7]'
+# elif COMPILER_VERSION_MINOR == 8
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[8]'
+# elif COMPILER_VERSION_MINOR == 9
+        PRINT *, 'INFO:compiler_version_MINOR_digit_4[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_5(n)
+# define HEX(n) HEX_5(n)
+# if COMPILER_VERSION_MINOR == 0
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[0]'
+# elif COMPILER_VERSION_MINOR == 1
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[1]'
+# elif COMPILER_VERSION_MINOR == 2
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[2]'
+# elif COMPILER_VERSION_MINOR == 3
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[3]'
+# elif COMPILER_VERSION_MINOR == 4
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[4]'
+# elif COMPILER_VERSION_MINOR == 5
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[5]'
+# elif COMPILER_VERSION_MINOR == 6
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[6]'
+# elif COMPILER_VERSION_MINOR == 7
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[7]'
+# elif COMPILER_VERSION_MINOR == 8
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[8]'
+# elif COMPILER_VERSION_MINOR == 9
+        PRINT *, 'INFO:compiler_version_MINOR_digit_5[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_6(n)
+# define HEX(n) HEX_6(n)
+# if COMPILER_VERSION_MINOR == 0
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[0]'
+# elif COMPILER_VERSION_MINOR == 1
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[1]'
+# elif COMPILER_VERSION_MINOR == 2
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[2]'
+# elif COMPILER_VERSION_MINOR == 3
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[3]'
+# elif COMPILER_VERSION_MINOR == 4
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[4]'
+# elif COMPILER_VERSION_MINOR == 5
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[5]'
+# elif COMPILER_VERSION_MINOR == 6
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[6]'
+# elif COMPILER_VERSION_MINOR == 7
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[7]'
+# elif COMPILER_VERSION_MINOR == 8
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[8]'
+# elif COMPILER_VERSION_MINOR == 9
+        PRINT *, 'INFO:compiler_version_MINOR_digit_6[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_7(n)
+# define HEX(n) HEX_7(n)
+# if COMPILER_VERSION_MINOR == 0
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[0]'
+# elif COMPILER_VERSION_MINOR == 1
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[1]'
+# elif COMPILER_VERSION_MINOR == 2
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[2]'
+# elif COMPILER_VERSION_MINOR == 3
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[3]'
+# elif COMPILER_VERSION_MINOR == 4
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[4]'
+# elif COMPILER_VERSION_MINOR == 5
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[5]'
+# elif COMPILER_VERSION_MINOR == 6
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[6]'
+# elif COMPILER_VERSION_MINOR == 7
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[7]'
+# elif COMPILER_VERSION_MINOR == 8
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[8]'
+# elif COMPILER_VERSION_MINOR == 9
+        PRINT *, 'INFO:compiler_version_MINOR_digit_7[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_8(n)
+# define HEX(n) HEX_8(n)
+# if COMPILER_VERSION_MINOR == 0
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[0]'
+# elif COMPILER_VERSION_MINOR == 1
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[1]'
+# elif COMPILER_VERSION_MINOR == 2
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[2]'
+# elif COMPILER_VERSION_MINOR == 3
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[3]'
+# elif COMPILER_VERSION_MINOR == 4
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[4]'
+# elif COMPILER_VERSION_MINOR == 5
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[5]'
+# elif COMPILER_VERSION_MINOR == 6
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[6]'
+# elif COMPILER_VERSION_MINOR == 7
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[7]'
+# elif COMPILER_VERSION_MINOR == 8
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[8]'
+# elif COMPILER_VERSION_MINOR == 9
+        PRINT *, 'INFO:compiler_version_MINOR_digit_8[9]'
+# endif
+
+#endif
+#if defined(COMPILER_VERSION_PATCH)
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_1(n)
+# define HEX(n) HEX_1(n)
+# if COMPILER_VERSION_PATCH == 0
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[0]'
+# elif COMPILER_VERSION_PATCH == 1
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[1]'
+# elif COMPILER_VERSION_PATCH == 2
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[2]'
+# elif COMPILER_VERSION_PATCH == 3
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[3]'
+# elif COMPILER_VERSION_PATCH == 4
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[4]'
+# elif COMPILER_VERSION_PATCH == 5
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[5]'
+# elif COMPILER_VERSION_PATCH == 6
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[6]'
+# elif COMPILER_VERSION_PATCH == 7
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[7]'
+# elif COMPILER_VERSION_PATCH == 8
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[8]'
+# elif COMPILER_VERSION_PATCH == 9
+        PRINT *, 'INFO:compiler_version_PATCH_digit_1[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_2(n)
+# define HEX(n) HEX_2(n)
+# if COMPILER_VERSION_PATCH == 0
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[0]'
+# elif COMPILER_VERSION_PATCH == 1
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[1]'
+# elif COMPILER_VERSION_PATCH == 2
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[2]'
+# elif COMPILER_VERSION_PATCH == 3
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[3]'
+# elif COMPILER_VERSION_PATCH == 4
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[4]'
+# elif COMPILER_VERSION_PATCH == 5
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[5]'
+# elif COMPILER_VERSION_PATCH == 6
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[6]'
+# elif COMPILER_VERSION_PATCH == 7
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[7]'
+# elif COMPILER_VERSION_PATCH == 8
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[8]'
+# elif COMPILER_VERSION_PATCH == 9
+        PRINT *, 'INFO:compiler_version_PATCH_digit_2[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_3(n)
+# define HEX(n) HEX_3(n)
+# if COMPILER_VERSION_PATCH == 0
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[0]'
+# elif COMPILER_VERSION_PATCH == 1
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[1]'
+# elif COMPILER_VERSION_PATCH == 2
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[2]'
+# elif COMPILER_VERSION_PATCH == 3
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[3]'
+# elif COMPILER_VERSION_PATCH == 4
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[4]'
+# elif COMPILER_VERSION_PATCH == 5
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[5]'
+# elif COMPILER_VERSION_PATCH == 6
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[6]'
+# elif COMPILER_VERSION_PATCH == 7
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[7]'
+# elif COMPILER_VERSION_PATCH == 8
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[8]'
+# elif COMPILER_VERSION_PATCH == 9
+        PRINT *, 'INFO:compiler_version_PATCH_digit_3[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_4(n)
+# define HEX(n) HEX_4(n)
+# if COMPILER_VERSION_PATCH == 0
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[0]'
+# elif COMPILER_VERSION_PATCH == 1
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[1]'
+# elif COMPILER_VERSION_PATCH == 2
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[2]'
+# elif COMPILER_VERSION_PATCH == 3
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[3]'
+# elif COMPILER_VERSION_PATCH == 4
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[4]'
+# elif COMPILER_VERSION_PATCH == 5
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[5]'
+# elif COMPILER_VERSION_PATCH == 6
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[6]'
+# elif COMPILER_VERSION_PATCH == 7
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[7]'
+# elif COMPILER_VERSION_PATCH == 8
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[8]'
+# elif COMPILER_VERSION_PATCH == 9
+        PRINT *, 'INFO:compiler_version_PATCH_digit_4[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_5(n)
+# define HEX(n) HEX_5(n)
+# if COMPILER_VERSION_PATCH == 0
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[0]'
+# elif COMPILER_VERSION_PATCH == 1
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[1]'
+# elif COMPILER_VERSION_PATCH == 2
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[2]'
+# elif COMPILER_VERSION_PATCH == 3
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[3]'
+# elif COMPILER_VERSION_PATCH == 4
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[4]'
+# elif COMPILER_VERSION_PATCH == 5
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[5]'
+# elif COMPILER_VERSION_PATCH == 6
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[6]'
+# elif COMPILER_VERSION_PATCH == 7
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[7]'
+# elif COMPILER_VERSION_PATCH == 8
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[8]'
+# elif COMPILER_VERSION_PATCH == 9
+        PRINT *, 'INFO:compiler_version_PATCH_digit_5[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_6(n)
+# define HEX(n) HEX_6(n)
+# if COMPILER_VERSION_PATCH == 0
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[0]'
+# elif COMPILER_VERSION_PATCH == 1
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[1]'
+# elif COMPILER_VERSION_PATCH == 2
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[2]'
+# elif COMPILER_VERSION_PATCH == 3
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[3]'
+# elif COMPILER_VERSION_PATCH == 4
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[4]'
+# elif COMPILER_VERSION_PATCH == 5
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[5]'
+# elif COMPILER_VERSION_PATCH == 6
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[6]'
+# elif COMPILER_VERSION_PATCH == 7
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[7]'
+# elif COMPILER_VERSION_PATCH == 8
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[8]'
+# elif COMPILER_VERSION_PATCH == 9
+        PRINT *, 'INFO:compiler_version_PATCH_digit_6[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_7(n)
+# define HEX(n) HEX_7(n)
+# if COMPILER_VERSION_PATCH == 0
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[0]'
+# elif COMPILER_VERSION_PATCH == 1
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[1]'
+# elif COMPILER_VERSION_PATCH == 2
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[2]'
+# elif COMPILER_VERSION_PATCH == 3
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[3]'
+# elif COMPILER_VERSION_PATCH == 4
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[4]'
+# elif COMPILER_VERSION_PATCH == 5
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[5]'
+# elif COMPILER_VERSION_PATCH == 6
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[6]'
+# elif COMPILER_VERSION_PATCH == 7
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[7]'
+# elif COMPILER_VERSION_PATCH == 8
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[8]'
+# elif COMPILER_VERSION_PATCH == 9
+        PRINT *, 'INFO:compiler_version_PATCH_digit_7[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_8(n)
+# define HEX(n) HEX_8(n)
+# if COMPILER_VERSION_PATCH == 0
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[0]'
+# elif COMPILER_VERSION_PATCH == 1
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[1]'
+# elif COMPILER_VERSION_PATCH == 2
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[2]'
+# elif COMPILER_VERSION_PATCH == 3
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[3]'
+# elif COMPILER_VERSION_PATCH == 4
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[4]'
+# elif COMPILER_VERSION_PATCH == 5
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[5]'
+# elif COMPILER_VERSION_PATCH == 6
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[6]'
+# elif COMPILER_VERSION_PATCH == 7
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[7]'
+# elif COMPILER_VERSION_PATCH == 8
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[8]'
+# elif COMPILER_VERSION_PATCH == 9
+        PRINT *, 'INFO:compiler_version_PATCH_digit_8[9]'
+# endif
+
+#endif
+#if defined(COMPILER_VERSION_TWEAK)
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_1(n)
+# define HEX(n) HEX_1(n)
+# if COMPILER_VERSION_TWEAK == 0
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[0]'
+# elif COMPILER_VERSION_TWEAK == 1
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[1]'
+# elif COMPILER_VERSION_TWEAK == 2
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[2]'
+# elif COMPILER_VERSION_TWEAK == 3
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[3]'
+# elif COMPILER_VERSION_TWEAK == 4
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[4]'
+# elif COMPILER_VERSION_TWEAK == 5
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[5]'
+# elif COMPILER_VERSION_TWEAK == 6
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[6]'
+# elif COMPILER_VERSION_TWEAK == 7
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[7]'
+# elif COMPILER_VERSION_TWEAK == 8
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[8]'
+# elif COMPILER_VERSION_TWEAK == 9
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_1[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_2(n)
+# define HEX(n) HEX_2(n)
+# if COMPILER_VERSION_TWEAK == 0
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[0]'
+# elif COMPILER_VERSION_TWEAK == 1
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[1]'
+# elif COMPILER_VERSION_TWEAK == 2
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[2]'
+# elif COMPILER_VERSION_TWEAK == 3
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[3]'
+# elif COMPILER_VERSION_TWEAK == 4
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[4]'
+# elif COMPILER_VERSION_TWEAK == 5
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[5]'
+# elif COMPILER_VERSION_TWEAK == 6
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[6]'
+# elif COMPILER_VERSION_TWEAK == 7
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[7]'
+# elif COMPILER_VERSION_TWEAK == 8
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[8]'
+# elif COMPILER_VERSION_TWEAK == 9
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_2[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_3(n)
+# define HEX(n) HEX_3(n)
+# if COMPILER_VERSION_TWEAK == 0
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[0]'
+# elif COMPILER_VERSION_TWEAK == 1
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[1]'
+# elif COMPILER_VERSION_TWEAK == 2
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[2]'
+# elif COMPILER_VERSION_TWEAK == 3
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[3]'
+# elif COMPILER_VERSION_TWEAK == 4
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[4]'
+# elif COMPILER_VERSION_TWEAK == 5
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[5]'
+# elif COMPILER_VERSION_TWEAK == 6
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[6]'
+# elif COMPILER_VERSION_TWEAK == 7
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[7]'
+# elif COMPILER_VERSION_TWEAK == 8
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[8]'
+# elif COMPILER_VERSION_TWEAK == 9
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_3[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_4(n)
+# define HEX(n) HEX_4(n)
+# if COMPILER_VERSION_TWEAK == 0
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[0]'
+# elif COMPILER_VERSION_TWEAK == 1
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[1]'
+# elif COMPILER_VERSION_TWEAK == 2
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[2]'
+# elif COMPILER_VERSION_TWEAK == 3
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[3]'
+# elif COMPILER_VERSION_TWEAK == 4
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[4]'
+# elif COMPILER_VERSION_TWEAK == 5
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[5]'
+# elif COMPILER_VERSION_TWEAK == 6
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[6]'
+# elif COMPILER_VERSION_TWEAK == 7
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[7]'
+# elif COMPILER_VERSION_TWEAK == 8
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[8]'
+# elif COMPILER_VERSION_TWEAK == 9
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_4[9]'
+# endif
+
+# undef DEC
+# undef HEX
+# define DEC(n) DEC_5(n)
+# define HEX(n) HEX_5(n)
+# if COMPILER_VERSION_TWEAK == 0
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_5[0]'
+# elif COMPILER_VERSION_TWEAK == 1
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_5[1]'
+# elif COMPILER_VERSION_TWEAK == 2
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_5[2]'
+# elif COMPILER_VERSION_TWEAK == 3
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_5[3]'
+# elif COMPILER_VERSION_TWEAK == 4
+        PRINT *, 'INFO:compiler_version_TWEAK_digit_5[4]'
+# elif COMPILER_VERSION_TWEAK == 5
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+
+# The command to remove a file.
+RM = /usr/bin/cmake -E remove -f
+
+# Escaping for special characters.
+EQUALS = =
+
+# The top-level source directory on which CMake was run.
+CMAKE_SOURCE_DIR = /store/software/opencmiss/OpenCMISS-examples/FiniteElasticity/RightBiceps/build_debug/mpi_verification/Fortran
+
+# The top-level build directory on which CMake was run.
+CMAKE_BINARY_DIR = /store/software/opencmiss/OpenCMISS-examples/FiniteElasticity/RightBiceps/build_debug/mpi_verification/Fortran
+
+#=============================================================================
+# Targets provided globally by CMake.
+
+# Special rule for the target edit_cache
+edit_cache:
+	@$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Running CMake cache editor..."
+	/usr/bin/ccmake -H$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR)
+.PHONY : edit_cache
+
+# Special rule for the target edit_cache
+edit_cache/fast: edit_cache
+
+.PHONY : edit_cache/fast
+
+# Special rule for the target rebuild_cache
+rebuild_cache:
+	@$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --cyan "Running CMake to regenerate build system..."
+	/usr/bin/cmake -H$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR)
+.PHONY : rebuild_cache
+
+# Special rule for the target rebuild_cache
+rebuild_cache/fast: rebuild_cache
+
+.PHONY : rebuild_cache/fast
+
+# The main all target
+all: cmake_check_build_system
+	$(CMAKE_COMMAND) -E cmake_progress_start /store/software/opencmiss/OpenCMISS-examples/FiniteElasticity/RightBiceps/build_debug/mpi_verification/Fortran/CMakeFiles /store/software/opencmiss/OpenCMISS-examples/FiniteElasticity/RightBiceps/build_debug/mpi_verification/Fortran/CMakeFiles/progress.marks
+	$(MAKE) -f CMakeFiles/Makefile2 all
+	$(CMAKE_COMMAND) -E cmake_progress_start /store/software/opencmiss/OpenCMISS-examples/FiniteElasticity/RightBiceps/build_debug/mpi_verification/Fortran/CMakeFiles 0
+.PHONY : all
+
+# The main clean target
+clean:
+	$(MAKE) -f CMakeFiles/Makefile2 clean
+.PHONY : clean
+
+# The main clean target
+clean/fast: clean
+
+.PHONY : clean/fast
+
+# Prepare targets for installation.
+preinstall: all
+	$(MAKE) -f CMakeFiles/Makefile2 preinstall
+.PHONY : preinstall
+
+# Prepare targets for installation.
+preinstall/fast:
+	$(MAKE) -f CMakeFiles/Makefile2 preinstall
+.PHONY : preinstall/fast
+
+# clear depends
+depend:
+	$(CMAKE_COMMAND) -H$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR) --check-build-system CMakeFiles/Makefile.cmake 1
+.PHONY : depend
+
+# Help Target
+help:
+	@echo "The following are some of the valid targets for this Makefile:"
+	@echo "... all (the default if no target is provided)"
+	@echo "... clean"
+	@echo "... depend"
+	@echo "... edit_cache"
+	@echo "... rebuild_cache"
+.PHONY : help
+
+
+
+#=============================================================================
+# Special targets to cleanup operation of make.
+
+# Special rule to run CMake to check the build system integrity.
+# No rule that depends on this can have commands that come from listfiles
+# because they might be regenerated.
+cmake_check_build_system:
+	$(CMAKE_COMMAND) -H$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR) --check-build-system CMakeFiles/Makefile.cmake 0
+.PHONY : cmake_check_build_system
+
diff --git a/FiniteElasticity/RightBiceps/build_debug/mpi_verification/Fortran/cmake_install.cmake b/FiniteElasticity/RightBiceps/build_debug/mpi_verification/Fortran/cmake_install.cmake
new file mode 100644
index 00000000..a605f26b
--- /dev/null
+++ b/FiniteElasticity/RightBiceps/build_debug/mpi_verification/Fortran/cmake_install.cmake
@@ -0,0 +1,44 @@
+# Install script for directory: /store/software/opencmiss/OpenCMISS-examples/FiniteElasticity/RightBiceps/build_debug/mpi_verification/Fortran
+
+# Set the install prefix
+if(NOT DEFINED CMAKE_INSTALL_PREFIX)
+  set(CMAKE_INSTALL_PREFIX "/usr/local")
+endif()
+string(REGEX REPLACE "/$" "" CMAKE_INSTALL_PREFIX "${CMAKE_INSTALL_PREFIX}")
+
+# Set the install configuration name.
+if(NOT DEFINED CMAKE_INSTALL_CONFIG_NAME)
+  if(BUILD_TYPE)
+    string(REGEX REPLACE "^[^A-Za-z0-9_]+" ""
+           CMAKE_INSTALL_CONFIG_NAME "${BUILD_TYPE}")
+  else()
+    set(CMAKE_INSTALL_CONFIG_NAME "")
+  endif()
+  message(STATUS "Install configuration: \"${CMAKE_INSTALL_CONFIG_NAME}\"")
+endif()
+
+# Set the component getting installed.
+if(NOT CMAKE_INSTALL_COMPONENT)
+  if(COMPONENT)
+    message(STATUS "Install component: \"${COMPONENT}\"")
+    set(CMAKE_INSTALL_COMPONENT "${COMPONENT}")
+  else()
+    set(CMAKE_INSTALL_COMPONENT)
+  endif()
+endif()
+
+# Install shared libraries without execute permission?
+if(NOT DEFINED CMAKE_INSTALL_SO_NO_EXE)
+  set(CMAKE_INSTALL_SO_NO_EXE "1")
+endif()
+
+if(CMAKE_INSTALL_COMPONENT)
+  set(CMAKE_INSTALL_MANIFEST "install_manifest_${CMAKE_INSTALL_COMPONENT}.txt")
+else()
+  set(CMAKE_INSTALL_MANIFEST "install_manifest.txt")
+endif()
+
+string(REPLACE ";" "\n" CMAKE_INSTALL_MANIFEST_CONTENT
+       "${CMAKE_INSTALL_MANIFEST_FILES}")
+file(WRITE "/store/software/opencmiss/OpenCMISS-examples/FiniteElasticity/RightBiceps/build_debug/mpi_verification/Fortran/${CMAKE_INSTALL_MANIFEST}"
+     "${CMAKE_INSTALL_MANIFEST_CONTENT}")
diff --git a/FiniteElasticity/RightBiceps/build_debug/mpi_verification/Fortran/compiler_info.cmake b/FiniteElasticity/RightBiceps/build_debug/mpi_verification/Fortran/compiler_info.cmake
new file mode 100644
index 00000000..b319d33e
--- /dev/null
+++ b/FiniteElasticity/RightBiceps/build_debug/mpi_verification/Fortran/compiler_info.cmake
@@ -0,0 +1,4 @@
+
+                    set(MPI_Fortran_COMPILER_VERSION 5.4.0)
+                    set(MPI_Fortran_COMPILER_ID GNU)
+                    
\ No newline at end of file
diff --git a/FiniteElasticity/SimpleShear/CMakeLists.txt b/FiniteElasticity/SimpleShear/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/SimpleShear/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/SimpleShear/Fortran/CMakeLists.txt b/FiniteElasticity/SimpleShear/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..7a542bb0
--- /dev/null
+++ b/FiniteElasticity/SimpleShear/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(SimpleShear  src/FortranExample.f90 src/FortranExample_nearly.f90 src/FortranExample_incomp.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(SimpleShear PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(SimpleShear PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_SimpleShear COMMAND SimpleShear)
+add_opencmiss_environment(test_SimpleShear)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/SimpleShear/OpenCMISS.cmake b/FiniteElasticity/SimpleShear/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/SimpleShear/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/SimpleShear/build_debug/build.sh b/FiniteElasticity/SimpleShear/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/SimpleShear/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/SimplexElements/LargeQuadraticTet/CMakeLists.txt b/FiniteElasticity/SimplexElements/LargeQuadraticTet/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/SimplexElements/LargeQuadraticTet/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/SimplexElements/LargeQuadraticTet/Fortran/CMakeLists.txt b/FiniteElasticity/SimplexElements/LargeQuadraticTet/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..80abbcf7
--- /dev/null
+++ b/FiniteElasticity/SimplexElements/LargeQuadraticTet/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LargeQuadraticTet  src/LargeQuadraticTetExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LargeQuadraticTet PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LargeQuadraticTet PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LargeQuadraticTet COMMAND LargeQuadraticTet)
+add_opencmiss_environment(test_LargeQuadraticTet)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/SimplexElements/LargeQuadraticTet/src/LargeQuadraticTetExample.f90 b/FiniteElasticity/SimplexElements/LargeQuadraticTet/Fortran/src/LargeQuadraticTetExample.f90
similarity index 100%
rename from FiniteElasticity/SimplexElements/LargeQuadraticTet/src/LargeQuadraticTetExample.f90
rename to FiniteElasticity/SimplexElements/LargeQuadraticTet/Fortran/src/LargeQuadraticTetExample.f90
diff --git a/FiniteElasticity/SimplexElements/LargeQuadraticTet/OpenCMISS.cmake b/FiniteElasticity/SimplexElements/LargeQuadraticTet/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/SimplexElements/LargeQuadraticTet/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/SimplexElements/LargeQuadraticTet/build_debug/build.sh b/FiniteElasticity/SimplexElements/LargeQuadraticTet/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/SimplexElements/LargeQuadraticTet/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/SimplexElements/LinearTet/CMakeLists.txt b/FiniteElasticity/SimplexElements/LinearTet/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/SimplexElements/LinearTet/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/SimplexElements/LinearTet/Fortran/CMakeLists.txt b/FiniteElasticity/SimplexElements/LinearTet/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..5dcf3560
--- /dev/null
+++ b/FiniteElasticity/SimplexElements/LinearTet/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LinearTet  src/LinearTetExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LinearTet PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LinearTet PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LinearTet COMMAND LinearTet)
+add_opencmiss_environment(test_LinearTet)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/SimplexElements/LinearTet/src/LinearTetExample.f90 b/FiniteElasticity/SimplexElements/LinearTet/Fortran/src/LinearTetExample.f90
similarity index 100%
rename from FiniteElasticity/SimplexElements/LinearTet/src/LinearTetExample.f90
rename to FiniteElasticity/SimplexElements/LinearTet/Fortran/src/LinearTetExample.f90
diff --git a/FiniteElasticity/SimplexElements/LinearTet/OpenCMISS.cmake b/FiniteElasticity/SimplexElements/LinearTet/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/SimplexElements/LinearTet/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/SimplexElements/LinearTet/build_debug/build.sh b/FiniteElasticity/SimplexElements/LinearTet/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/SimplexElements/LinearTet/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/SimplexElements/QuadraticTet/CMakeLists.txt b/FiniteElasticity/SimplexElements/QuadraticTet/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/SimplexElements/QuadraticTet/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/SimplexElements/QuadraticTet/Fortran/CMakeLists.txt b/FiniteElasticity/SimplexElements/QuadraticTet/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..2692ef0f
--- /dev/null
+++ b/FiniteElasticity/SimplexElements/QuadraticTet/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(QuadraticTet  src/QuadraticTetExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(QuadraticTet PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(QuadraticTet PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_QuadraticTet COMMAND QuadraticTet)
+add_opencmiss_environment(test_QuadraticTet)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/SimplexElements/QuadraticTet/src/QuadraticTetExample.f90 b/FiniteElasticity/SimplexElements/QuadraticTet/Fortran/src/QuadraticTetExample.f90
similarity index 100%
rename from FiniteElasticity/SimplexElements/QuadraticTet/src/QuadraticTetExample.f90
rename to FiniteElasticity/SimplexElements/QuadraticTet/Fortran/src/QuadraticTetExample.f90
diff --git a/FiniteElasticity/SimplexElements/QuadraticTet/OpenCMISS.cmake b/FiniteElasticity/SimplexElements/QuadraticTet/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/SimplexElements/QuadraticTet/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/SimplexElements/QuadraticTet/build_debug/build.sh b/FiniteElasticity/SimplexElements/QuadraticTet/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/SimplexElements/QuadraticTet/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/TriCubicAxialExtension/CMakeLists.txt b/FiniteElasticity/TriCubicAxialExtension/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/TriCubicAxialExtension/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/TriCubicAxialExtension/Fortran/CMakeLists.txt b/FiniteElasticity/TriCubicAxialExtension/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..e1ff9219
--- /dev/null
+++ b/FiniteElasticity/TriCubicAxialExtension/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(TriCubicAxialExtension  src/TriCubicAxialExtensionExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(TriCubicAxialExtension PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(TriCubicAxialExtension PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_TriCubicAxialExtension COMMAND TriCubicAxialExtension)
+add_opencmiss_environment(test_TriCubicAxialExtension)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/TriCubicAxialExtension/src/TriCubicAxialExtensionExample.f90 b/FiniteElasticity/TriCubicAxialExtension/Fortran/src/TriCubicAxialExtensionExample.f90
similarity index 100%
rename from FiniteElasticity/TriCubicAxialExtension/src/TriCubicAxialExtensionExample.f90
rename to FiniteElasticity/TriCubicAxialExtension/Fortran/src/TriCubicAxialExtensionExample.f90
diff --git a/FiniteElasticity/TriCubicAxialExtension/OpenCMISS.cmake b/FiniteElasticity/TriCubicAxialExtension/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/TriCubicAxialExtension/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/TriCubicAxialExtension/build_debug/build.sh b/FiniteElasticity/TriCubicAxialExtension/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/TriCubicAxialExtension/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/TriQuadraticCube/CMakeLists.txt b/FiniteElasticity/TriQuadraticCube/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/TriQuadraticCube/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/TriQuadraticCube/Fortran/CMakeLists.txt b/FiniteElasticity/TriQuadraticCube/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..17c695e0
--- /dev/null
+++ b/FiniteElasticity/TriQuadraticCube/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(TriQuadraticCube  src/TriQuadraticCubeExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(TriQuadraticCube PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(TriQuadraticCube PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_TriQuadraticCube COMMAND TriQuadraticCube)
+add_opencmiss_environment(test_TriQuadraticCube)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/TriQuadraticCube/src/TriQuadraticCubeExample.f90 b/FiniteElasticity/TriQuadraticCube/Fortran/src/TriQuadraticCubeExample.f90
similarity index 100%
rename from FiniteElasticity/TriQuadraticCube/src/TriQuadraticCubeExample.f90
rename to FiniteElasticity/TriQuadraticCube/Fortran/src/TriQuadraticCubeExample.f90
diff --git a/FiniteElasticity/TriQuadraticCube/OpenCMISS.cmake b/FiniteElasticity/TriQuadraticCube/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/TriQuadraticCube/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/TriQuadraticCube/build_debug/build.sh b/FiniteElasticity/TriQuadraticCube/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/TriQuadraticCube/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/UniAxialExtension/CMakeLists.txt b/FiniteElasticity/UniAxialExtension/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/UniAxialExtension/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/UniAxialExtension/Fortran/CMakeLists.txt b/FiniteElasticity/UniAxialExtension/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..175c27eb
--- /dev/null
+++ b/FiniteElasticity/UniAxialExtension/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(UniAxialExtension  src/FortranExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(UniAxialExtension PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(UniAxialExtension PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_UniAxialExtension COMMAND UniAxialExtension)
+add_opencmiss_environment(test_UniAxialExtension)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/UniAxialExtension/OpenCMISS.cmake b/FiniteElasticity/UniAxialExtension/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/UniAxialExtension/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/UniAxialExtension/build_debug/build.sh b/FiniteElasticity/UniAxialExtension/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/UniAxialExtension/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/UniAxialExtensionCompressible/CMakeLists.txt b/FiniteElasticity/UniAxialExtensionCompressible/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/UniAxialExtensionCompressible/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/UniAxialExtensionCompressible/Fortran/CMakeLists.txt b/FiniteElasticity/UniAxialExtensionCompressible/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..cce5a3bf
--- /dev/null
+++ b/FiniteElasticity/UniAxialExtensionCompressible/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(UniAxialExtensionCompressible  src/UniAxialExtensionCompressibleExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(UniAxialExtensionCompressible PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(UniAxialExtensionCompressible PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_UniAxialExtensionCompressible COMMAND UniAxialExtensionCompressible)
+add_opencmiss_environment(test_UniAxialExtensionCompressible)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/UniAxialExtensionCompressible/src/UniAxialExtensionCompressibleExample.f90 b/FiniteElasticity/UniAxialExtensionCompressible/Fortran/src/UniAxialExtensionCompressibleExample.f90
similarity index 100%
rename from FiniteElasticity/UniAxialExtensionCompressible/src/UniAxialExtensionCompressibleExample.f90
rename to FiniteElasticity/UniAxialExtensionCompressible/Fortran/src/UniAxialExtensionCompressibleExample.f90
diff --git a/FiniteElasticity/UniAxialExtensionCompressible/OpenCMISS.cmake b/FiniteElasticity/UniAxialExtensionCompressible/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/UniAxialExtensionCompressible/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/UniAxialExtensionCompressible/build_debug/build.sh b/FiniteElasticity/UniAxialExtensionCompressible/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/UniAxialExtensionCompressible/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/UniAxialExtensionLoadIncrements/CMakeLists.txt b/FiniteElasticity/UniAxialExtensionLoadIncrements/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/UniAxialExtensionLoadIncrements/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/UniAxialExtensionLoadIncrements/Fortran/CMakeLists.txt b/FiniteElasticity/UniAxialExtensionLoadIncrements/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..7085b43f
--- /dev/null
+++ b/FiniteElasticity/UniAxialExtensionLoadIncrements/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(UniAxialExtensionLoadIncrements  src/UniAxialExtensionLoadIncrementsExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(UniAxialExtensionLoadIncrements PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(UniAxialExtensionLoadIncrements PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_UniAxialExtensionLoadIncrements COMMAND UniAxialExtensionLoadIncrements)
+add_opencmiss_environment(test_UniAxialExtensionLoadIncrements)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/UniAxialExtensionLoadIncrements/src/UniAxialExtensionLoadIncrementsExample.f90 b/FiniteElasticity/UniAxialExtensionLoadIncrements/Fortran/src/UniAxialExtensionLoadIncrementsExample.f90
similarity index 100%
rename from FiniteElasticity/UniAxialExtensionLoadIncrements/src/UniAxialExtensionLoadIncrementsExample.f90
rename to FiniteElasticity/UniAxialExtensionLoadIncrements/Fortran/src/UniAxialExtensionLoadIncrementsExample.f90
diff --git a/FiniteElasticity/UniAxialExtensionLoadIncrements/OpenCMISS.cmake b/FiniteElasticity/UniAxialExtensionLoadIncrements/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/UniAxialExtensionLoadIncrements/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/UniAxialExtensionLoadIncrements/build_debug/build.sh b/FiniteElasticity/UniAxialExtensionLoadIncrements/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/UniAxialExtensionLoadIncrements/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/UniAxialExtensionOrthotropic/CMakeLists.txt b/FiniteElasticity/UniAxialExtensionOrthotropic/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/UniAxialExtensionOrthotropic/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/UniAxialExtensionOrthotropic/Fortran/CMakeLists.txt b/FiniteElasticity/UniAxialExtensionOrthotropic/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..cbcec4f2
--- /dev/null
+++ b/FiniteElasticity/UniAxialExtensionOrthotropic/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(UniAxialExtensionOrthotropic  src/UniAxialExtensionOrthotropicExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(UniAxialExtensionOrthotropic PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(UniAxialExtensionOrthotropic PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_UniAxialExtensionOrthotropic COMMAND UniAxialExtensionOrthotropic)
+add_opencmiss_environment(test_UniAxialExtensionOrthotropic)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/UniAxialExtensionOrthotropic/src/UniAxialExtensionOrthotropicExample.f90 b/FiniteElasticity/UniAxialExtensionOrthotropic/Fortran/src/UniAxialExtensionOrthotropicExample.f90
similarity index 100%
rename from FiniteElasticity/UniAxialExtensionOrthotropic/src/UniAxialExtensionOrthotropicExample.f90
rename to FiniteElasticity/UniAxialExtensionOrthotropic/Fortran/src/UniAxialExtensionOrthotropicExample.f90
diff --git a/FiniteElasticity/UniAxialExtensionOrthotropic/OpenCMISS.cmake b/FiniteElasticity/UniAxialExtensionOrthotropic/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/UniAxialExtensionOrthotropic/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/UniAxialExtensionOrthotropic/build_debug/build.sh b/FiniteElasticity/UniAxialExtensionOrthotropic/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/UniAxialExtensionOrthotropic/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FiniteElasticity/testingPoints/CMakeLists.txt b/FiniteElasticity/testingPoints/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FiniteElasticity/testingPoints/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FiniteElasticity/testingPoints/Fortran/CMakeLists.txt b/FiniteElasticity/testingPoints/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..03ef6345
--- /dev/null
+++ b/FiniteElasticity/testingPoints/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(testingPoints  src/testingPointsExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(testingPoints PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(testingPoints PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_testingPoints COMMAND testingPoints)
+add_opencmiss_environment(test_testingPoints)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FiniteElasticity/testingPoints/src/testingPointsExample.f90 b/FiniteElasticity/testingPoints/Fortran/src/testingPointsExample.f90
similarity index 100%
rename from FiniteElasticity/testingPoints/src/testingPointsExample.f90
rename to FiniteElasticity/testingPoints/Fortran/src/testingPointsExample.f90
diff --git a/FiniteElasticity/testingPoints/OpenCMISS.cmake b/FiniteElasticity/testingPoints/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FiniteElasticity/testingPoints/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FiniteElasticity/testingPoints/build_debug/build.sh b/FiniteElasticity/testingPoints/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FiniteElasticity/testingPoints/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/Burgers/Burgers/CMakeLists.txt b/FluidMechanics/Burgers/Burgers/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/Burgers/Burgers/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/Burgers/Burgers/Fortran/CMakeLists.txt b/FluidMechanics/Burgers/Burgers/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..97a3d020
--- /dev/null
+++ b/FluidMechanics/Burgers/Burgers/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Burgers  src/BurgersExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Burgers PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Burgers PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Burgers COMMAND Burgers)
+add_opencmiss_environment(test_Burgers)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/Burgers/Burgers/src/BurgersExample.f90 b/FluidMechanics/Burgers/Burgers/Fortran/src/BurgersExample.f90
similarity index 100%
rename from FluidMechanics/Burgers/Burgers/src/BurgersExample.f90
rename to FluidMechanics/Burgers/Burgers/Fortran/src/BurgersExample.f90
diff --git a/FluidMechanics/Burgers/Burgers/OpenCMISS.cmake b/FluidMechanics/Burgers/Burgers/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/Burgers/Burgers/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/Burgers/Burgers/build_debug/build.sh b/FluidMechanics/Burgers/Burgers/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/Burgers/Burgers/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/Burgers/GeneralisedBurgers/CMakeLists.txt b/FluidMechanics/Burgers/GeneralisedBurgers/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/Burgers/GeneralisedBurgers/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/Burgers/GeneralisedBurgers/Fortran/CMakeLists.txt b/FluidMechanics/Burgers/GeneralisedBurgers/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..0386ebff
--- /dev/null
+++ b/FluidMechanics/Burgers/GeneralisedBurgers/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(GeneralisedBurgers  src/GeneralisedBurgersExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(GeneralisedBurgers PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(GeneralisedBurgers PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_GeneralisedBurgers COMMAND GeneralisedBurgers)
+add_opencmiss_environment(test_GeneralisedBurgers)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/Burgers/GeneralisedBurgers/src/GeneralisedBurgersExample.f90 b/FluidMechanics/Burgers/GeneralisedBurgers/Fortran/src/GeneralisedBurgersExample.f90
similarity index 100%
rename from FluidMechanics/Burgers/GeneralisedBurgers/src/GeneralisedBurgersExample.f90
rename to FluidMechanics/Burgers/GeneralisedBurgers/Fortran/src/GeneralisedBurgersExample.f90
diff --git a/FluidMechanics/Burgers/GeneralisedBurgers/OpenCMISS.cmake b/FluidMechanics/Burgers/GeneralisedBurgers/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/Burgers/GeneralisedBurgers/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/Burgers/GeneralisedBurgers/build_debug/build.sh b/FluidMechanics/Burgers/GeneralisedBurgers/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/Burgers/GeneralisedBurgers/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/Burgers/StaticBurgers/CMakeLists.txt b/FluidMechanics/Burgers/StaticBurgers/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/Burgers/StaticBurgers/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/Burgers/StaticBurgers/Fortran/CMakeLists.txt b/FluidMechanics/Burgers/StaticBurgers/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..03a7f60b
--- /dev/null
+++ b/FluidMechanics/Burgers/StaticBurgers/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(StaticBurgers  src/StaticBurgersExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(StaticBurgers PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(StaticBurgers PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_StaticBurgers COMMAND StaticBurgers)
+add_opencmiss_environment(test_StaticBurgers)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/Burgers/StaticBurgers/src/StaticBurgersExample.f90 b/FluidMechanics/Burgers/StaticBurgers/Fortran/src/StaticBurgersExample.f90
similarity index 100%
rename from FluidMechanics/Burgers/StaticBurgers/src/StaticBurgersExample.f90
rename to FluidMechanics/Burgers/StaticBurgers/Fortran/src/StaticBurgersExample.f90
diff --git a/FluidMechanics/Burgers/StaticBurgers/OpenCMISS.cmake b/FluidMechanics/Burgers/StaticBurgers/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/Burgers/StaticBurgers/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/Burgers/StaticBurgers/build_debug/build.sh b/FluidMechanics/Burgers/StaticBurgers/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/Burgers/StaticBurgers/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/Darcy/Analytic/CMakeLists.txt b/FluidMechanics/Darcy/Analytic/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/Darcy/Analytic/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/Darcy/Analytic/Fortran/CMakeLists.txt b/FluidMechanics/Darcy/Analytic/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..6098ab98
--- /dev/null
+++ b/FluidMechanics/Darcy/Analytic/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Analytic  src/AnalyticExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Analytic PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Analytic PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Analytic COMMAND Analytic)
+add_opencmiss_environment(test_Analytic)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/Darcy/Analytic/src/AnalyticExample.f90 b/FluidMechanics/Darcy/Analytic/Fortran/src/AnalyticExample.f90
similarity index 100%
rename from FluidMechanics/Darcy/Analytic/src/AnalyticExample.f90
rename to FluidMechanics/Darcy/Analytic/Fortran/src/AnalyticExample.f90
diff --git a/FluidMechanics/Darcy/Analytic/OpenCMISS.cmake b/FluidMechanics/Darcy/Analytic/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/Darcy/Analytic/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/Darcy/Analytic/build_debug/build.sh b/FluidMechanics/Darcy/Analytic/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/Darcy/Analytic/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/Darcy/Dynamic/CMakeLists.txt b/FluidMechanics/Darcy/Dynamic/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/Darcy/Dynamic/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/Darcy/Dynamic/Fortran/CMakeLists.txt b/FluidMechanics/Darcy/Dynamic/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..b0d7f800
--- /dev/null
+++ b/FluidMechanics/Darcy/Dynamic/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Dynamic  src/DynamicExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Dynamic PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Dynamic PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Dynamic COMMAND Dynamic)
+add_opencmiss_environment(test_Dynamic)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/Darcy/Dynamic/src/DynamicExample.f90 b/FluidMechanics/Darcy/Dynamic/Fortran/src/DynamicExample.f90
similarity index 100%
rename from FluidMechanics/Darcy/Dynamic/src/DynamicExample.f90
rename to FluidMechanics/Darcy/Dynamic/Fortran/src/DynamicExample.f90
diff --git a/FluidMechanics/Darcy/Dynamic/OpenCMISS.cmake b/FluidMechanics/Darcy/Dynamic/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/Darcy/Dynamic/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/Darcy/Dynamic/build_debug/build.sh b/FluidMechanics/Darcy/Dynamic/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/Darcy/Dynamic/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/Darcy/MultiCompartmentStaticDarcy/CMakeLists.txt b/FluidMechanics/Darcy/MultiCompartmentStaticDarcy/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/Darcy/MultiCompartmentStaticDarcy/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/Darcy/MultiCompartmentStaticDarcy/Fortran/CMakeLists.txt b/FluidMechanics/Darcy/MultiCompartmentStaticDarcy/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..442b5739
--- /dev/null
+++ b/FluidMechanics/Darcy/MultiCompartmentStaticDarcy/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(MultiCompartmentStaticDarcy  src/MultiCompartmentStaticDarcyExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(MultiCompartmentStaticDarcy PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(MultiCompartmentStaticDarcy PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_MultiCompartmentStaticDarcy COMMAND MultiCompartmentStaticDarcy)
+add_opencmiss_environment(test_MultiCompartmentStaticDarcy)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/Darcy/MultiCompartmentStaticDarcy/src/MultiCompartmentStaticDarcyExample.f90 b/FluidMechanics/Darcy/MultiCompartmentStaticDarcy/Fortran/src/MultiCompartmentStaticDarcyExample.f90
similarity index 100%
rename from FluidMechanics/Darcy/MultiCompartmentStaticDarcy/src/MultiCompartmentStaticDarcyExample.f90
rename to FluidMechanics/Darcy/MultiCompartmentStaticDarcy/Fortran/src/MultiCompartmentStaticDarcyExample.f90
diff --git a/FluidMechanics/Darcy/MultiCompartmentStaticDarcy/OpenCMISS.cmake b/FluidMechanics/Darcy/MultiCompartmentStaticDarcy/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/Darcy/MultiCompartmentStaticDarcy/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/Darcy/MultiCompartmentStaticDarcy/build_debug/build.sh b/FluidMechanics/Darcy/MultiCompartmentStaticDarcy/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/Darcy/MultiCompartmentStaticDarcy/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/Darcy/QuasistaticMaterial/CMakeLists.txt b/FluidMechanics/Darcy/QuasistaticMaterial/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/Darcy/QuasistaticMaterial/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/Darcy/QuasistaticMaterial/Fortran/CMakeLists.txt b/FluidMechanics/Darcy/QuasistaticMaterial/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..76fafd74
--- /dev/null
+++ b/FluidMechanics/Darcy/QuasistaticMaterial/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(QuasistaticMaterial  src/QuasistaticMaterialExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(QuasistaticMaterial PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(QuasistaticMaterial PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_QuasistaticMaterial COMMAND QuasistaticMaterial)
+add_opencmiss_environment(test_QuasistaticMaterial)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/Darcy/QuasistaticMaterial/src/QuasistaticMaterialExample.f90 b/FluidMechanics/Darcy/QuasistaticMaterial/Fortran/src/QuasistaticMaterialExample.f90
similarity index 100%
rename from FluidMechanics/Darcy/QuasistaticMaterial/src/QuasistaticMaterialExample.f90
rename to FluidMechanics/Darcy/QuasistaticMaterial/Fortran/src/QuasistaticMaterialExample.f90
diff --git a/FluidMechanics/Darcy/QuasistaticMaterial/OpenCMISS.cmake b/FluidMechanics/Darcy/QuasistaticMaterial/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/Darcy/QuasistaticMaterial/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/Darcy/QuasistaticMaterial/build_debug/build.sh b/FluidMechanics/Darcy/QuasistaticMaterial/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/Darcy/QuasistaticMaterial/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/Darcy/Static/CMakeLists.txt b/FluidMechanics/Darcy/Static/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/Darcy/Static/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/Darcy/Static/Fortran/CMakeLists.txt b/FluidMechanics/Darcy/Static/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..d1b76f7d
--- /dev/null
+++ b/FluidMechanics/Darcy/Static/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Static  src/StaticExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Static PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Static PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Static COMMAND Static)
+add_opencmiss_environment(test_Static)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/Darcy/Static/src/StaticExample.f90 b/FluidMechanics/Darcy/Static/Fortran/src/StaticExample.f90
similarity index 100%
rename from FluidMechanics/Darcy/Static/src/StaticExample.f90
rename to FluidMechanics/Darcy/Static/Fortran/src/StaticExample.f90
diff --git a/FluidMechanics/Darcy/Static/OpenCMISS.cmake b/FluidMechanics/Darcy/Static/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/Darcy/Static/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/Darcy/Static/build_debug/build.sh b/FluidMechanics/Darcy/Static/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/Darcy/Static/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/Darcy/temp_memory_issue/CMakeLists.txt b/FluidMechanics/Darcy/temp_memory_issue/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/Darcy/temp_memory_issue/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/Darcy/temp_memory_issue/Fortran/CMakeLists.txt b/FluidMechanics/Darcy/temp_memory_issue/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..2e89de88
--- /dev/null
+++ b/FluidMechanics/Darcy/temp_memory_issue/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(temp_memory_issue  src/temp_memory_issueExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(temp_memory_issue PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(temp_memory_issue PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_temp_memory_issue COMMAND temp_memory_issue)
+add_opencmiss_environment(test_temp_memory_issue)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/Darcy/temp_memory_issue/src/temp_memory_issueExample.f90 b/FluidMechanics/Darcy/temp_memory_issue/Fortran/src/temp_memory_issueExample.f90
similarity index 100%
rename from FluidMechanics/Darcy/temp_memory_issue/src/temp_memory_issueExample.f90
rename to FluidMechanics/Darcy/temp_memory_issue/Fortran/src/temp_memory_issueExample.f90
diff --git a/FluidMechanics/Darcy/temp_memory_issue/OpenCMISS.cmake b/FluidMechanics/Darcy/temp_memory_issue/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/Darcy/temp_memory_issue/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/Darcy/temp_memory_issue/build_debug/build.sh b/FluidMechanics/Darcy/temp_memory_issue/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/Darcy/temp_memory_issue/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/NavierStokes/42Master/CMakeLists.txt b/FluidMechanics/NavierStokes/42Master/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/NavierStokes/42Master/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/NavierStokes/42Master/Fortran/CMakeLists.txt b/FluidMechanics/NavierStokes/42Master/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..20e09803
--- /dev/null
+++ b/FluidMechanics/NavierStokes/42Master/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(42Master  src/42MasterExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(42Master PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(42Master PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_42Master COMMAND 42Master)
+add_opencmiss_environment(test_42Master)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/NavierStokes/42Master/src/42MasterExample.f90 b/FluidMechanics/NavierStokes/42Master/Fortran/src/42MasterExample.f90
similarity index 100%
rename from FluidMechanics/NavierStokes/42Master/src/42MasterExample.f90
rename to FluidMechanics/NavierStokes/42Master/Fortran/src/42MasterExample.f90
diff --git a/FluidMechanics/NavierStokes/42Master/OpenCMISS.cmake b/FluidMechanics/NavierStokes/42Master/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/NavierStokes/42Master/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/NavierStokes/42Master/build_debug/build.sh b/FluidMechanics/NavierStokes/42Master/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/NavierStokes/42Master/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/NavierStokes/Coupled1DCellML/CMakeLists.txt b/FluidMechanics/NavierStokes/Coupled1DCellML/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/NavierStokes/Coupled1DCellML/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/NavierStokes/Coupled1DCellML/Fortran/CMakeLists.txt b/FluidMechanics/NavierStokes/Coupled1DCellML/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..56eeffea
--- /dev/null
+++ b/FluidMechanics/NavierStokes/Coupled1DCellML/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Coupled1DCellML  src/FortranExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Coupled1DCellML PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Coupled1DCellML PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Coupled1DCellML COMMAND Coupled1DCellML)
+add_opencmiss_environment(test_Coupled1DCellML)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/NavierStokes/Coupled1DCellML/OpenCMISS.cmake b/FluidMechanics/NavierStokes/Coupled1DCellML/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/NavierStokes/Coupled1DCellML/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/NavierStokes/Coupled1DCellML/build_debug/build.sh b/FluidMechanics/NavierStokes/Coupled1DCellML/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/NavierStokes/Coupled1DCellML/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/NavierStokes/Poiseuille/2DChannel/Static/CMakeLists.txt b/FluidMechanics/NavierStokes/Poiseuille/2DChannel/Static/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/NavierStokes/Poiseuille/2DChannel/Static/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/NavierStokes/Poiseuille/2DChannel/Static/Fortran/CMakeLists.txt b/FluidMechanics/NavierStokes/Poiseuille/2DChannel/Static/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..d1b76f7d
--- /dev/null
+++ b/FluidMechanics/NavierStokes/Poiseuille/2DChannel/Static/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Static  src/StaticExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Static PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Static PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Static COMMAND Static)
+add_opencmiss_environment(test_Static)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/NavierStokes/Poiseuille/2DChannel/Static/src/StaticExample.f90 b/FluidMechanics/NavierStokes/Poiseuille/2DChannel/Static/Fortran/src/StaticExample.f90
similarity index 100%
rename from FluidMechanics/NavierStokes/Poiseuille/2DChannel/Static/src/StaticExample.f90
rename to FluidMechanics/NavierStokes/Poiseuille/2DChannel/Static/Fortran/src/StaticExample.f90
diff --git a/FluidMechanics/NavierStokes/Poiseuille/2DChannel/Static/OpenCMISS.cmake b/FluidMechanics/NavierStokes/Poiseuille/2DChannel/Static/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/NavierStokes/Poiseuille/2DChannel/Static/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/NavierStokes/Poiseuille/2DChannel/Static/build_debug/build.sh b/FluidMechanics/NavierStokes/Poiseuille/2DChannel/Static/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/NavierStokes/Poiseuille/2DChannel/Static/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/ALE/CMakeLists.txt b/FluidMechanics/NavierStokes/RoutineCheck/ALE/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/ALE/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/ALE/Fortran/CMakeLists.txt b/FluidMechanics/NavierStokes/RoutineCheck/ALE/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..80318461
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/ALE/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(ALE  src/ALEExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(ALE PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(ALE PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_ALE COMMAND ALE)
+add_opencmiss_environment(test_ALE)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/ALE/src/ALEExample.f90 b/FluidMechanics/NavierStokes/RoutineCheck/ALE/Fortran/src/ALEExample.f90
similarity index 100%
rename from FluidMechanics/NavierStokes/RoutineCheck/ALE/src/ALEExample.f90
rename to FluidMechanics/NavierStokes/RoutineCheck/ALE/Fortran/src/ALEExample.f90
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/ALE/OpenCMISS.cmake b/FluidMechanics/NavierStokes/RoutineCheck/ALE/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/ALE/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/ALE/build_debug/build.sh b/FluidMechanics/NavierStokes/RoutineCheck/ALE/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/ALE/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/Dynamic/CMakeLists.txt b/FluidMechanics/NavierStokes/RoutineCheck/Dynamic/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/Dynamic/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/Dynamic/Fortran/CMakeLists.txt b/FluidMechanics/NavierStokes/RoutineCheck/Dynamic/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..b0d7f800
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/Dynamic/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Dynamic  src/DynamicExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Dynamic PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Dynamic PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Dynamic COMMAND Dynamic)
+add_opencmiss_environment(test_Dynamic)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/Dynamic/src/DynamicExample.f90 b/FluidMechanics/NavierStokes/RoutineCheck/Dynamic/Fortran/src/DynamicExample.f90
similarity index 100%
rename from FluidMechanics/NavierStokes/RoutineCheck/Dynamic/src/DynamicExample.f90
rename to FluidMechanics/NavierStokes/RoutineCheck/Dynamic/Fortran/src/DynamicExample.f90
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/Dynamic/OpenCMISS.cmake b/FluidMechanics/NavierStokes/RoutineCheck/Dynamic/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/Dynamic/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/Dynamic/build_debug/build.sh b/FluidMechanics/NavierStokes/RoutineCheck/Dynamic/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/Dynamic/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/ParallelDynamic/CMakeLists.txt b/FluidMechanics/NavierStokes/RoutineCheck/ParallelDynamic/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/ParallelDynamic/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/ParallelDynamic/Fortran/CMakeLists.txt b/FluidMechanics/NavierStokes/RoutineCheck/ParallelDynamic/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..e5a509ef
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/ParallelDynamic/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(ParallelDynamic  src/ParallelDynamicExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(ParallelDynamic PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(ParallelDynamic PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_ParallelDynamic COMMAND ParallelDynamic)
+add_opencmiss_environment(test_ParallelDynamic)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/ParallelDynamic/src/ParallelDynamicExample.f90 b/FluidMechanics/NavierStokes/RoutineCheck/ParallelDynamic/Fortran/src/ParallelDynamicExample.f90
similarity index 100%
rename from FluidMechanics/NavierStokes/RoutineCheck/ParallelDynamic/src/ParallelDynamicExample.f90
rename to FluidMechanics/NavierStokes/RoutineCheck/ParallelDynamic/Fortran/src/ParallelDynamicExample.f90
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/ParallelDynamic/OpenCMISS.cmake b/FluidMechanics/NavierStokes/RoutineCheck/ParallelDynamic/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/ParallelDynamic/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/ParallelDynamic/build_debug/build.sh b/FluidMechanics/NavierStokes/RoutineCheck/ParallelDynamic/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/ParallelDynamic/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/ParallelStatic/CMakeLists.txt b/FluidMechanics/NavierStokes/RoutineCheck/ParallelStatic/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/ParallelStatic/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/ParallelStatic/Fortran/CMakeLists.txt b/FluidMechanics/NavierStokes/RoutineCheck/ParallelStatic/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..b1c43e68
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/ParallelStatic/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(ParallelStatic  src/ParallelStaticExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(ParallelStatic PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(ParallelStatic PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_ParallelStatic COMMAND ParallelStatic)
+add_opencmiss_environment(test_ParallelStatic)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/ParallelStatic/src/ParallelStaticExample.f90 b/FluidMechanics/NavierStokes/RoutineCheck/ParallelStatic/Fortran/src/ParallelStaticExample.f90
similarity index 100%
rename from FluidMechanics/NavierStokes/RoutineCheck/ParallelStatic/src/ParallelStaticExample.f90
rename to FluidMechanics/NavierStokes/RoutineCheck/ParallelStatic/Fortran/src/ParallelStaticExample.f90
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/ParallelStatic/OpenCMISS.cmake b/FluidMechanics/NavierStokes/RoutineCheck/ParallelStatic/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/ParallelStatic/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/ParallelStatic/build_debug/build.sh b/FluidMechanics/NavierStokes/RoutineCheck/ParallelStatic/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/ParallelStatic/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/Static/CMakeLists.txt b/FluidMechanics/NavierStokes/RoutineCheck/Static/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/Static/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/Static/Fortran/CMakeLists.txt b/FluidMechanics/NavierStokes/RoutineCheck/Static/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..d1b76f7d
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/Static/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Static  src/StaticExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Static PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Static PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Static COMMAND Static)
+add_opencmiss_environment(test_Static)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/Static/src/StaticExample.f90 b/FluidMechanics/NavierStokes/RoutineCheck/Static/Fortran/src/StaticExample.f90
similarity index 100%
rename from FluidMechanics/NavierStokes/RoutineCheck/Static/src/StaticExample.f90
rename to FluidMechanics/NavierStokes/RoutineCheck/Static/Fortran/src/StaticExample.f90
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/Static/OpenCMISS.cmake b/FluidMechanics/NavierStokes/RoutineCheck/Static/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/Static/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/NavierStokes/RoutineCheck/Static/build_debug/build.sh b/FluidMechanics/NavierStokes/RoutineCheck/Static/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/NavierStokes/RoutineCheck/Static/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/NavierStokes/Static_FieldML/CMakeLists.txt b/FluidMechanics/NavierStokes/Static_FieldML/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/NavierStokes/Static_FieldML/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/NavierStokes/Static_FieldML/Fortran/CMakeLists.txt b/FluidMechanics/NavierStokes/Static_FieldML/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..59e91a6f
--- /dev/null
+++ b/FluidMechanics/NavierStokes/Static_FieldML/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Static_FieldML  src/Static_FieldMLExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Static_FieldML PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Static_FieldML PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Static_FieldML COMMAND Static_FieldML)
+add_opencmiss_environment(test_Static_FieldML)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/NavierStokes/Static_FieldML/src/Static_FieldMLExample.f90 b/FluidMechanics/NavierStokes/Static_FieldML/Fortran/src/Static_FieldMLExample.f90
similarity index 100%
rename from FluidMechanics/NavierStokes/Static_FieldML/src/Static_FieldMLExample.f90
rename to FluidMechanics/NavierStokes/Static_FieldML/Fortran/src/Static_FieldMLExample.f90
diff --git a/FluidMechanics/NavierStokes/Static_FieldML/OpenCMISS.cmake b/FluidMechanics/NavierStokes/Static_FieldML/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/NavierStokes/Static_FieldML/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/NavierStokes/Static_FieldML/build_debug/build.sh b/FluidMechanics/NavierStokes/Static_FieldML/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/NavierStokes/Static_FieldML/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/NavierStokes/SupgChannel/CMakeLists.txt b/FluidMechanics/NavierStokes/SupgChannel/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/NavierStokes/SupgChannel/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/NavierStokes/SupgChannel/Fortran/CMakeLists.txt b/FluidMechanics/NavierStokes/SupgChannel/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..f56d0a9c
--- /dev/null
+++ b/FluidMechanics/NavierStokes/SupgChannel/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(SupgChannel  src/SupgChannelExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(SupgChannel PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(SupgChannel PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_SupgChannel COMMAND SupgChannel)
+add_opencmiss_environment(test_SupgChannel)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/NavierStokes/SupgChannel/src/SupgChannelExample.f90 b/FluidMechanics/NavierStokes/SupgChannel/Fortran/src/SupgChannelExample.f90
similarity index 100%
rename from FluidMechanics/NavierStokes/SupgChannel/src/SupgChannelExample.f90
rename to FluidMechanics/NavierStokes/SupgChannel/Fortran/src/SupgChannelExample.f90
diff --git a/FluidMechanics/NavierStokes/SupgChannel/OpenCMISS.cmake b/FluidMechanics/NavierStokes/SupgChannel/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/NavierStokes/SupgChannel/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/NavierStokes/SupgChannel/build_debug/build.sh b/FluidMechanics/NavierStokes/SupgChannel/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/NavierStokes/SupgChannel/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/NavierStokes/TaylorGreen/CMakeLists.txt b/FluidMechanics/NavierStokes/TaylorGreen/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/NavierStokes/TaylorGreen/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/NavierStokes/TaylorGreen/Fortran/CMakeLists.txt b/FluidMechanics/NavierStokes/TaylorGreen/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..dced1bcc
--- /dev/null
+++ b/FluidMechanics/NavierStokes/TaylorGreen/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(TaylorGreen  src/TaylorGreenExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(TaylorGreen PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(TaylorGreen PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_TaylorGreen COMMAND TaylorGreen)
+add_opencmiss_environment(test_TaylorGreen)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/NavierStokes/TaylorGreen/src/TaylorGreenExample.f90 b/FluidMechanics/NavierStokes/TaylorGreen/Fortran/src/TaylorGreenExample.f90
similarity index 100%
rename from FluidMechanics/NavierStokes/TaylorGreen/src/TaylorGreenExample.f90
rename to FluidMechanics/NavierStokes/TaylorGreen/Fortran/src/TaylorGreenExample.f90
diff --git a/FluidMechanics/NavierStokes/TaylorGreen/OpenCMISS.cmake b/FluidMechanics/NavierStokes/TaylorGreen/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/NavierStokes/TaylorGreen/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/NavierStokes/TaylorGreen/build_debug/build.sh b/FluidMechanics/NavierStokes/TaylorGreen/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/NavierStokes/TaylorGreen/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_0.5/CMakeLists.txt b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_0.5/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_0.5/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_0.5/Fortran/CMakeLists.txt b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_0.5/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..f9e6a8bb
--- /dev/null
+++ b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_0.5/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(DynamicTest_theta_0.5  src/DynamicTest_theta_0.5Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(DynamicTest_theta_0.5 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(DynamicTest_theta_0.5 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_DynamicTest_theta_0.5 COMMAND DynamicTest_theta_0.5)
+add_opencmiss_environment(test_DynamicTest_theta_0.5)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_0.5/src/DynamicTest_theta_0.5Example.f90 b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_0.5/Fortran/src/DynamicTest_theta_0.5Example.f90
similarity index 100%
rename from FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_0.5/src/DynamicTest_theta_0.5Example.f90
rename to FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_0.5/Fortran/src/DynamicTest_theta_0.5Example.f90
diff --git a/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_0.5/OpenCMISS.cmake b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_0.5/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_0.5/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_0.5/build_debug/build.sh b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_0.5/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_0.5/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_1.0/CMakeLists.txt b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_1.0/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_1.0/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_1.0/Fortran/CMakeLists.txt b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_1.0/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..22914ad4
--- /dev/null
+++ b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_1.0/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(DynamicTest_theta_1.0  src/DynamicTest_theta_1.0Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(DynamicTest_theta_1.0 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(DynamicTest_theta_1.0 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_DynamicTest_theta_1.0 COMMAND DynamicTest_theta_1.0)
+add_opencmiss_environment(test_DynamicTest_theta_1.0)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_1.0/src/DynamicTest_theta_1.0Example.f90 b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_1.0/Fortran/src/DynamicTest_theta_1.0Example.f90
similarity index 100%
rename from FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_1.0/src/DynamicTest_theta_1.0Example.f90
rename to FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_1.0/Fortran/src/DynamicTest_theta_1.0Example.f90
diff --git a/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_1.0/OpenCMISS.cmake b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_1.0/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_1.0/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_1.0/build_debug/build.sh b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_1.0/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/NavierStokes/temp_tests/DynamicTest_theta_1.0/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/Poiseuille/Static/CMakeLists.txt b/FluidMechanics/Poiseuille/Static/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/Poiseuille/Static/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/Poiseuille/Static/Fortran/CMakeLists.txt b/FluidMechanics/Poiseuille/Static/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..d1b76f7d
--- /dev/null
+++ b/FluidMechanics/Poiseuille/Static/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Static  src/StaticExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Static PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Static PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Static COMMAND Static)
+add_opencmiss_environment(test_Static)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/Poiseuille/Static/src/StaticExample.f90 b/FluidMechanics/Poiseuille/Static/Fortran/src/StaticExample.f90
similarity index 100%
rename from FluidMechanics/Poiseuille/Static/src/StaticExample.f90
rename to FluidMechanics/Poiseuille/Static/Fortran/src/StaticExample.f90
diff --git a/FluidMechanics/Poiseuille/Static/OpenCMISS.cmake b/FluidMechanics/Poiseuille/Static/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/Poiseuille/Static/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/Poiseuille/Static/build_debug/build.sh b/FluidMechanics/Poiseuille/Static/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/Poiseuille/Static/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/SCRATCH/DynamicNavierStokesInParallel/CMakeLists.txt b/FluidMechanics/SCRATCH/DynamicNavierStokesInParallel/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/SCRATCH/DynamicNavierStokesInParallel/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/SCRATCH/DynamicNavierStokesInParallel/Fortran/CMakeLists.txt b/FluidMechanics/SCRATCH/DynamicNavierStokesInParallel/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..87a40147
--- /dev/null
+++ b/FluidMechanics/SCRATCH/DynamicNavierStokesInParallel/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(DynamicNavierStokesInParallel  src/DynamicNavierStokesInParallelExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(DynamicNavierStokesInParallel PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(DynamicNavierStokesInParallel PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_DynamicNavierStokesInParallel COMMAND DynamicNavierStokesInParallel)
+add_opencmiss_environment(test_DynamicNavierStokesInParallel)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/SCRATCH/DynamicNavierStokesInParallel/src/DynamicNavierStokesInParallelExample.f90 b/FluidMechanics/SCRATCH/DynamicNavierStokesInParallel/Fortran/src/DynamicNavierStokesInParallelExample.f90
similarity index 100%
rename from FluidMechanics/SCRATCH/DynamicNavierStokesInParallel/src/DynamicNavierStokesInParallelExample.f90
rename to FluidMechanics/SCRATCH/DynamicNavierStokesInParallel/Fortran/src/DynamicNavierStokesInParallelExample.f90
diff --git a/FluidMechanics/SCRATCH/DynamicNavierStokesInParallel/OpenCMISS.cmake b/FluidMechanics/SCRATCH/DynamicNavierStokesInParallel/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/SCRATCH/DynamicNavierStokesInParallel/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/SCRATCH/DynamicNavierStokesInParallel/build_debug/build.sh b/FluidMechanics/SCRATCH/DynamicNavierStokesInParallel/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/SCRATCH/DynamicNavierStokesInParallel/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/Stokes/42Master/CMakeLists.txt b/FluidMechanics/Stokes/42Master/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/Stokes/42Master/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/Stokes/42Master/Fortran/CMakeLists.txt b/FluidMechanics/Stokes/42Master/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..20e09803
--- /dev/null
+++ b/FluidMechanics/Stokes/42Master/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(42Master  src/42MasterExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(42Master PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(42Master PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_42Master COMMAND 42Master)
+add_opencmiss_environment(test_42Master)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/Stokes/42Master/src/42MasterExample.f90 b/FluidMechanics/Stokes/42Master/Fortran/src/42MasterExample.f90
similarity index 100%
rename from FluidMechanics/Stokes/42Master/src/42MasterExample.f90
rename to FluidMechanics/Stokes/42Master/Fortran/src/42MasterExample.f90
diff --git a/FluidMechanics/Stokes/42Master/OpenCMISS.cmake b/FluidMechanics/Stokes/42Master/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/Stokes/42Master/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/Stokes/42Master/build_debug/build.sh b/FluidMechanics/Stokes/42Master/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/Stokes/42Master/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/Stokes/RoutineCheck/ALE/CMakeLists.txt b/FluidMechanics/Stokes/RoutineCheck/ALE/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/Stokes/RoutineCheck/ALE/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/Stokes/RoutineCheck/ALE/Fortran/CMakeLists.txt b/FluidMechanics/Stokes/RoutineCheck/ALE/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..80318461
--- /dev/null
+++ b/FluidMechanics/Stokes/RoutineCheck/ALE/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(ALE  src/ALEExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(ALE PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(ALE PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_ALE COMMAND ALE)
+add_opencmiss_environment(test_ALE)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/Stokes/RoutineCheck/ALE/src/ALEExample.f90 b/FluidMechanics/Stokes/RoutineCheck/ALE/Fortran/src/ALEExample.f90
similarity index 100%
rename from FluidMechanics/Stokes/RoutineCheck/ALE/src/ALEExample.f90
rename to FluidMechanics/Stokes/RoutineCheck/ALE/Fortran/src/ALEExample.f90
diff --git a/FluidMechanics/Stokes/RoutineCheck/ALE/OpenCMISS.cmake b/FluidMechanics/Stokes/RoutineCheck/ALE/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/Stokes/RoutineCheck/ALE/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/Stokes/RoutineCheck/ALE/build_debug/build.sh b/FluidMechanics/Stokes/RoutineCheck/ALE/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/Stokes/RoutineCheck/ALE/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/Stokes/RoutineCheck/Dynamic/CMakeLists.txt b/FluidMechanics/Stokes/RoutineCheck/Dynamic/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/Stokes/RoutineCheck/Dynamic/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/Stokes/RoutineCheck/Dynamic/Fortran/CMakeLists.txt b/FluidMechanics/Stokes/RoutineCheck/Dynamic/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..b0d7f800
--- /dev/null
+++ b/FluidMechanics/Stokes/RoutineCheck/Dynamic/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Dynamic  src/DynamicExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Dynamic PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Dynamic PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Dynamic COMMAND Dynamic)
+add_opencmiss_environment(test_Dynamic)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/Stokes/RoutineCheck/Dynamic/src/DynamicExample.f90 b/FluidMechanics/Stokes/RoutineCheck/Dynamic/Fortran/src/DynamicExample.f90
similarity index 100%
rename from FluidMechanics/Stokes/RoutineCheck/Dynamic/src/DynamicExample.f90
rename to FluidMechanics/Stokes/RoutineCheck/Dynamic/Fortran/src/DynamicExample.f90
diff --git a/FluidMechanics/Stokes/RoutineCheck/Dynamic/OpenCMISS.cmake b/FluidMechanics/Stokes/RoutineCheck/Dynamic/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/Stokes/RoutineCheck/Dynamic/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/Stokes/RoutineCheck/Dynamic/build_debug/build.sh b/FluidMechanics/Stokes/RoutineCheck/Dynamic/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/Stokes/RoutineCheck/Dynamic/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/FluidMechanics/Stokes/RoutineCheck/Static/CMakeLists.txt b/FluidMechanics/Stokes/RoutineCheck/Static/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/FluidMechanics/Stokes/RoutineCheck/Static/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/FluidMechanics/Stokes/RoutineCheck/Static/Fortran/CMakeLists.txt b/FluidMechanics/Stokes/RoutineCheck/Static/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..d1b76f7d
--- /dev/null
+++ b/FluidMechanics/Stokes/RoutineCheck/Static/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Static  src/StaticExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Static PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Static PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Static COMMAND Static)
+add_opencmiss_environment(test_Static)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/FluidMechanics/Stokes/RoutineCheck/Static/src/StaticExample.f90 b/FluidMechanics/Stokes/RoutineCheck/Static/Fortran/src/StaticExample.f90
similarity index 100%
rename from FluidMechanics/Stokes/RoutineCheck/Static/src/StaticExample.f90
rename to FluidMechanics/Stokes/RoutineCheck/Static/Fortran/src/StaticExample.f90
diff --git a/FluidMechanics/Stokes/RoutineCheck/Static/OpenCMISS.cmake b/FluidMechanics/Stokes/RoutineCheck/Static/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/FluidMechanics/Stokes/RoutineCheck/Static/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/FluidMechanics/Stokes/RoutineCheck/Static/build_debug/build.sh b/FluidMechanics/Stokes/RoutineCheck/Static/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/FluidMechanics/Stokes/RoutineCheck/Static/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/InterfaceExamples/CoupledFluidSolid/CMakeLists.txt b/InterfaceExamples/CoupledFluidSolid/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/InterfaceExamples/CoupledFluidSolid/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/InterfaceExamples/CoupledFluidSolid/Fortran/CMakeLists.txt b/InterfaceExamples/CoupledFluidSolid/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..7480a563
--- /dev/null
+++ b/InterfaceExamples/CoupledFluidSolid/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(CoupledFluidSolid  src/FortranExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(CoupledFluidSolid PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(CoupledFluidSolid PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_CoupledFluidSolid COMMAND CoupledFluidSolid)
+add_opencmiss_environment(test_CoupledFluidSolid)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/InterfaceExamples/CoupledFluidSolid/Fortran/OpenCMISS.cmake b/InterfaceExamples/CoupledFluidSolid/Fortran/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/InterfaceExamples/CoupledFluidSolid/Fortran/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/InterfaceExamples/CoupledFluidSolid/OpenCMISS.cmake b/InterfaceExamples/CoupledFluidSolid/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/InterfaceExamples/CoupledFluidSolid/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/InterfaceExamples/CoupledFluidSolid/build_debug/build.sh b/InterfaceExamples/CoupledFluidSolid/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/InterfaceExamples/CoupledFluidSolid/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/InterfaceExamples/CoupledLaplace/CMakeLists.txt b/InterfaceExamples/CoupledLaplace/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/InterfaceExamples/CoupledLaplace/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/InterfaceExamples/CoupledLaplace/Fortran/CMakeLists.txt b/InterfaceExamples/CoupledLaplace/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..bcc05faf
--- /dev/null
+++ b/InterfaceExamples/CoupledLaplace/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(CoupledLaplace  src/CoupledLaplaceExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(CoupledLaplace PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(CoupledLaplace PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_CoupledLaplace COMMAND CoupledLaplace)
+add_opencmiss_environment(test_CoupledLaplace)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/InterfaceExamples/CoupledLaplace/src/CoupledLaplaceExample.f90 b/InterfaceExamples/CoupledLaplace/Fortran/src/CoupledLaplaceExample.f90
similarity index 100%
rename from InterfaceExamples/CoupledLaplace/src/CoupledLaplaceExample.f90
rename to InterfaceExamples/CoupledLaplace/Fortran/src/CoupledLaplaceExample.f90
diff --git a/InterfaceExamples/CoupledLaplace/OpenCMISS.cmake b/InterfaceExamples/CoupledLaplace/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/InterfaceExamples/CoupledLaplace/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/InterfaceExamples/CoupledLaplace/build_debug/build.sh b/InterfaceExamples/CoupledLaplace/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/InterfaceExamples/CoupledLaplace/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/InterfaceExamples/InputCoupledLaplace/CMakeLists.txt b/InterfaceExamples/InputCoupledLaplace/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/InterfaceExamples/InputCoupledLaplace/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/InterfaceExamples/InputCoupledLaplace/Fortran/CMakeLists.txt b/InterfaceExamples/InputCoupledLaplace/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..1470edf5
--- /dev/null
+++ b/InterfaceExamples/InputCoupledLaplace/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(InputCoupledLaplace  src/InputCoupledLaplaceExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(InputCoupledLaplace PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(InputCoupledLaplace PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_InputCoupledLaplace COMMAND InputCoupledLaplace)
+add_opencmiss_environment(test_InputCoupledLaplace)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/InterfaceExamples/InputCoupledLaplace/src/InputCoupledLaplaceExample.f90 b/InterfaceExamples/InputCoupledLaplace/Fortran/src/InputCoupledLaplaceExample.f90
similarity index 100%
rename from InterfaceExamples/InputCoupledLaplace/src/InputCoupledLaplaceExample.f90
rename to InterfaceExamples/InputCoupledLaplace/Fortran/src/InputCoupledLaplaceExample.f90
diff --git a/InterfaceExamples/InputCoupledLaplace/OpenCMISS.cmake b/InterfaceExamples/InputCoupledLaplace/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/InterfaceExamples/InputCoupledLaplace/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/InterfaceExamples/InputCoupledLaplace/build_debug/build.sh b/InterfaceExamples/InputCoupledLaplace/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/InterfaceExamples/InputCoupledLaplace/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/InterfaceExamples/InputCoupledStokes/CMakeLists.txt b/InterfaceExamples/InputCoupledStokes/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/InterfaceExamples/InputCoupledStokes/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/InterfaceExamples/InputCoupledStokes/Fortran/CMakeLists.txt b/InterfaceExamples/InputCoupledStokes/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..29da4516
--- /dev/null
+++ b/InterfaceExamples/InputCoupledStokes/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(InputCoupledStokes  src/InputCoupledStokesExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(InputCoupledStokes PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(InputCoupledStokes PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_InputCoupledStokes COMMAND InputCoupledStokes)
+add_opencmiss_environment(test_InputCoupledStokes)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/InterfaceExamples/InputCoupledStokes/src/InputCoupledStokesExample.f90 b/InterfaceExamples/InputCoupledStokes/Fortran/src/InputCoupledStokesExample.f90
similarity index 100%
rename from InterfaceExamples/InputCoupledStokes/src/InputCoupledStokesExample.f90
rename to InterfaceExamples/InputCoupledStokes/Fortran/src/InputCoupledStokesExample.f90
diff --git a/InterfaceExamples/InputCoupledStokes/OpenCMISS.cmake b/InterfaceExamples/InputCoupledStokes/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/InterfaceExamples/InputCoupledStokes/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/InterfaceExamples/InputCoupledStokes/build_debug/build.sh b/InterfaceExamples/InputCoupledStokes/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/InterfaceExamples/InputCoupledStokes/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/InterfaceExamples/InputUnCoupledLaplace/CMakeLists.txt b/InterfaceExamples/InputUnCoupledLaplace/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/InterfaceExamples/InputUnCoupledLaplace/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/InterfaceExamples/InputUnCoupledLaplace/Fortran/CMakeLists.txt b/InterfaceExamples/InputUnCoupledLaplace/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..6c248128
--- /dev/null
+++ b/InterfaceExamples/InputUnCoupledLaplace/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(InputUnCoupledLaplace  src/InputUnCoupledLaplaceExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(InputUnCoupledLaplace PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(InputUnCoupledLaplace PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_InputUnCoupledLaplace COMMAND InputUnCoupledLaplace)
+add_opencmiss_environment(test_InputUnCoupledLaplace)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/InterfaceExamples/InputUnCoupledLaplace/src/InputUnCoupledLaplaceExample.f90 b/InterfaceExamples/InputUnCoupledLaplace/Fortran/src/InputUnCoupledLaplaceExample.f90
similarity index 100%
rename from InterfaceExamples/InputUnCoupledLaplace/src/InputUnCoupledLaplaceExample.f90
rename to InterfaceExamples/InputUnCoupledLaplace/Fortran/src/InputUnCoupledLaplaceExample.f90
diff --git a/InterfaceExamples/InputUnCoupledLaplace/OpenCMISS.cmake b/InterfaceExamples/InputUnCoupledLaplace/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/InterfaceExamples/InputUnCoupledLaplace/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/InterfaceExamples/InputUnCoupledLaplace/build_debug/build.sh b/InterfaceExamples/InputUnCoupledLaplace/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/InterfaceExamples/InputUnCoupledLaplace/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/InterfaceExamples/UnCoupledLaplace/CMakeLists.txt b/InterfaceExamples/UnCoupledLaplace/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/InterfaceExamples/UnCoupledLaplace/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/InterfaceExamples/UnCoupledLaplace/Fortran/CMakeLists.txt b/InterfaceExamples/UnCoupledLaplace/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..4df9f6d9
--- /dev/null
+++ b/InterfaceExamples/UnCoupledLaplace/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(UnCoupledLaplace  src/UnCoupledLaplaceExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(UnCoupledLaplace PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(UnCoupledLaplace PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_UnCoupledLaplace COMMAND UnCoupledLaplace)
+add_opencmiss_environment(test_UnCoupledLaplace)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/InterfaceExamples/UnCoupledLaplace/src/UnCoupledLaplaceExample.f90 b/InterfaceExamples/UnCoupledLaplace/Fortran/src/UnCoupledLaplaceExample.f90
similarity index 100%
rename from InterfaceExamples/UnCoupledLaplace/src/UnCoupledLaplaceExample.f90
rename to InterfaceExamples/UnCoupledLaplace/Fortran/src/UnCoupledLaplaceExample.f90
diff --git a/InterfaceExamples/UnCoupledLaplace/OpenCMISS.cmake b/InterfaceExamples/UnCoupledLaplace/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/InterfaceExamples/UnCoupledLaplace/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/InterfaceExamples/UnCoupledLaplace/build_debug/build.sh b/InterfaceExamples/UnCoupledLaplace/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/InterfaceExamples/UnCoupledLaplace/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/LinearElasticity/2DExtensionPlaneStressLagrangeBasis/CMakeLists.txt b/LinearElasticity/2DExtensionPlaneStressLagrangeBasis/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/LinearElasticity/2DExtensionPlaneStressLagrangeBasis/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/LinearElasticity/2DExtensionPlaneStressLagrangeBasis/Fortran/CMakeLists.txt b/LinearElasticity/2DExtensionPlaneStressLagrangeBasis/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..c16cc7b1
--- /dev/null
+++ b/LinearElasticity/2DExtensionPlaneStressLagrangeBasis/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(2DExtensionPlaneStressLagrangeBasis  src/2DExtensionPlaneStressLagrangeBasisExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(2DExtensionPlaneStressLagrangeBasis PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(2DExtensionPlaneStressLagrangeBasis PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_2DExtensionPlaneStressLagrangeBasis COMMAND 2DExtensionPlaneStressLagrangeBasis)
+add_opencmiss_environment(test_2DExtensionPlaneStressLagrangeBasis)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/LinearElasticity/2DExtensionPlaneStressLagrangeBasis/src/2DExtensionPlaneStressLagrangeBasisExample.f90 b/LinearElasticity/2DExtensionPlaneStressLagrangeBasis/Fortran/src/2DExtensionPlaneStressLagrangeBasisExample.f90
similarity index 100%
rename from LinearElasticity/2DExtensionPlaneStressLagrangeBasis/src/2DExtensionPlaneStressLagrangeBasisExample.f90
rename to LinearElasticity/2DExtensionPlaneStressLagrangeBasis/Fortran/src/2DExtensionPlaneStressLagrangeBasisExample.f90
diff --git a/LinearElasticity/2DExtensionPlaneStressLagrangeBasis/OpenCMISS.cmake b/LinearElasticity/2DExtensionPlaneStressLagrangeBasis/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/LinearElasticity/2DExtensionPlaneStressLagrangeBasis/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/LinearElasticity/2DExtensionPlaneStressLagrangeBasis/build_debug/build.sh b/LinearElasticity/2DExtensionPlaneStressLagrangeBasis/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/LinearElasticity/2DExtensionPlaneStressLagrangeBasis/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/LinearElasticity/3DExtensionHermiteBasis/CMakeLists.txt b/LinearElasticity/3DExtensionHermiteBasis/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/LinearElasticity/3DExtensionHermiteBasis/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/LinearElasticity/3DExtensionHermiteBasis/Fortran/CMakeLists.txt b/LinearElasticity/3DExtensionHermiteBasis/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..28ea81f3
--- /dev/null
+++ b/LinearElasticity/3DExtensionHermiteBasis/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(3DExtensionHermiteBasis  src/3DExtensionHermiteBasisExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(3DExtensionHermiteBasis PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(3DExtensionHermiteBasis PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_3DExtensionHermiteBasis COMMAND 3DExtensionHermiteBasis)
+add_opencmiss_environment(test_3DExtensionHermiteBasis)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/LinearElasticity/3DExtensionHermiteBasis/src/3DExtensionHermiteBasisExample.f90 b/LinearElasticity/3DExtensionHermiteBasis/Fortran/src/3DExtensionHermiteBasisExample.f90
similarity index 100%
rename from LinearElasticity/3DExtensionHermiteBasis/src/3DExtensionHermiteBasisExample.f90
rename to LinearElasticity/3DExtensionHermiteBasis/Fortran/src/3DExtensionHermiteBasisExample.f90
diff --git a/LinearElasticity/3DExtensionHermiteBasis/OpenCMISS.cmake b/LinearElasticity/3DExtensionHermiteBasis/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/LinearElasticity/3DExtensionHermiteBasis/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/LinearElasticity/3DExtensionHermiteBasis/build_debug/build.sh b/LinearElasticity/3DExtensionHermiteBasis/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/LinearElasticity/3DExtensionHermiteBasis/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/LinearElasticity/3DExtensionLagrangeBasis/CMakeLists.txt b/LinearElasticity/3DExtensionLagrangeBasis/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/LinearElasticity/3DExtensionLagrangeBasis/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/LinearElasticity/3DExtensionLagrangeBasis/Fortran/CMakeLists.txt b/LinearElasticity/3DExtensionLagrangeBasis/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..36e232aa
--- /dev/null
+++ b/LinearElasticity/3DExtensionLagrangeBasis/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(3DExtensionLagrangeBasis  src/3DExtensionLagrangeBasisExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(3DExtensionLagrangeBasis PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(3DExtensionLagrangeBasis PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_3DExtensionLagrangeBasis COMMAND 3DExtensionLagrangeBasis)
+add_opencmiss_environment(test_3DExtensionLagrangeBasis)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/LinearElasticity/3DExtensionLagrangeBasis/src/3DExtensionLagrangeBasisExample.f90 b/LinearElasticity/3DExtensionLagrangeBasis/Fortran/src/3DExtensionLagrangeBasisExample.f90
similarity index 100%
rename from LinearElasticity/3DExtensionLagrangeBasis/src/3DExtensionLagrangeBasisExample.f90
rename to LinearElasticity/3DExtensionLagrangeBasis/Fortran/src/3DExtensionLagrangeBasisExample.f90
diff --git a/LinearElasticity/3DExtensionLagrangeBasis/OpenCMISS.cmake b/LinearElasticity/3DExtensionLagrangeBasis/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/LinearElasticity/3DExtensionLagrangeBasis/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/LinearElasticity/3DExtensionLagrangeBasis/build_debug/build.sh b/LinearElasticity/3DExtensionLagrangeBasis/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/LinearElasticity/3DExtensionLagrangeBasis/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/LinearElasticity/Analytic/CantileverBeam/CMakeLists.txt b/LinearElasticity/Analytic/CantileverBeam/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/LinearElasticity/Analytic/CantileverBeam/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/LinearElasticity/Analytic/CantileverBeam/Fortran/CMakeLists.txt b/LinearElasticity/Analytic/CantileverBeam/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..eebeadf8
--- /dev/null
+++ b/LinearElasticity/Analytic/CantileverBeam/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(CantileverBeam  src/CantileverBeamExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(CantileverBeam PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(CantileverBeam PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_CantileverBeam COMMAND CantileverBeam)
+add_opencmiss_environment(test_CantileverBeam)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/LinearElasticity/Analytic/CantileverBeam/src/CantileverBeamExample.f90 b/LinearElasticity/Analytic/CantileverBeam/Fortran/src/CantileverBeamExample.f90
similarity index 100%
rename from LinearElasticity/Analytic/CantileverBeam/src/CantileverBeamExample.f90
rename to LinearElasticity/Analytic/CantileverBeam/Fortran/src/CantileverBeamExample.f90
diff --git a/LinearElasticity/Analytic/CantileverBeam/OpenCMISS.cmake b/LinearElasticity/Analytic/CantileverBeam/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/LinearElasticity/Analytic/CantileverBeam/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/LinearElasticity/Analytic/CantileverBeam/build_debug/build.sh b/LinearElasticity/Analytic/CantileverBeam/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/LinearElasticity/Analytic/CantileverBeam/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/LinearElasticity/Analytic/Extension/CMakeLists.txt b/LinearElasticity/Analytic/Extension/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/LinearElasticity/Analytic/Extension/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/LinearElasticity/Analytic/Extension/Fortran/CMakeLists.txt b/LinearElasticity/Analytic/Extension/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..54c08fb2
--- /dev/null
+++ b/LinearElasticity/Analytic/Extension/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Extension  src/ExtensionExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Extension PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Extension PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Extension COMMAND Extension)
+add_opencmiss_environment(test_Extension)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/LinearElasticity/Analytic/Extension/src/ExtensionExample.f90 b/LinearElasticity/Analytic/Extension/Fortran/src/ExtensionExample.f90
similarity index 100%
rename from LinearElasticity/Analytic/Extension/src/ExtensionExample.f90
rename to LinearElasticity/Analytic/Extension/Fortran/src/ExtensionExample.f90
diff --git a/LinearElasticity/Analytic/Extension/OpenCMISS.cmake b/LinearElasticity/Analytic/Extension/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/LinearElasticity/Analytic/Extension/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/LinearElasticity/Analytic/Extension/build_debug/build.sh b/LinearElasticity/Analytic/Extension/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/LinearElasticity/Analytic/Extension/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Meshes/1DCubicHermite/CMakeLists.txt b/Meshes/1DCubicHermite/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Meshes/1DCubicHermite/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Meshes/1DCubicHermite/Fortran/CMakeLists.txt b/Meshes/1DCubicHermite/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..293a8510
--- /dev/null
+++ b/Meshes/1DCubicHermite/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(1DCubicHermite  src/1DCubicHermiteExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(1DCubicHermite PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(1DCubicHermite PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_1DCubicHermite COMMAND 1DCubicHermite)
+add_opencmiss_environment(test_1DCubicHermite)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Meshes/1DCubicHermite/src/1DCubicHermiteExample.f90 b/Meshes/1DCubicHermite/Fortran/src/1DCubicHermiteExample.f90
similarity index 100%
rename from Meshes/1DCubicHermite/src/1DCubicHermiteExample.f90
rename to Meshes/1DCubicHermite/Fortran/src/1DCubicHermiteExample.f90
diff --git a/Meshes/1DCubicHermite/OpenCMISS.cmake b/Meshes/1DCubicHermite/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Meshes/1DCubicHermite/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Meshes/1DCubicHermite/build_debug/build.sh b/Meshes/1DCubicHermite/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Meshes/1DCubicHermite/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Meshes/LagrangeSimplexMesh/CMakeLists.txt b/Meshes/LagrangeSimplexMesh/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Meshes/LagrangeSimplexMesh/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Meshes/LagrangeSimplexMesh/Fortran/CMakeLists.txt b/Meshes/LagrangeSimplexMesh/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..9df15542
--- /dev/null
+++ b/Meshes/LagrangeSimplexMesh/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(LagrangeSimplexMesh  src/LagrangeSimplexMeshExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(LagrangeSimplexMesh PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(LagrangeSimplexMesh PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_LagrangeSimplexMesh COMMAND LagrangeSimplexMesh)
+add_opencmiss_environment(test_LagrangeSimplexMesh)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Meshes/LagrangeSimplexMesh/src/LagrangeSimplexMeshExample.f90 b/Meshes/LagrangeSimplexMesh/Fortran/src/LagrangeSimplexMeshExample.f90
similarity index 100%
rename from Meshes/LagrangeSimplexMesh/src/LagrangeSimplexMeshExample.f90
rename to Meshes/LagrangeSimplexMesh/Fortran/src/LagrangeSimplexMeshExample.f90
diff --git a/Meshes/LagrangeSimplexMesh/OpenCMISS.cmake b/Meshes/LagrangeSimplexMesh/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Meshes/LagrangeSimplexMesh/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Meshes/LagrangeSimplexMesh/build_debug/build.sh b/Meshes/LagrangeSimplexMesh/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Meshes/LagrangeSimplexMesh/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Meshes/MoreComplexMesh/CMakeLists.txt b/Meshes/MoreComplexMesh/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Meshes/MoreComplexMesh/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Meshes/MoreComplexMesh/Fortran/CMakeLists.txt b/Meshes/MoreComplexMesh/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..2bdc6cc5
--- /dev/null
+++ b/Meshes/MoreComplexMesh/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(MoreComplexMesh  src/MoreComplexMeshExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(MoreComplexMesh PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(MoreComplexMesh PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_MoreComplexMesh COMMAND MoreComplexMesh)
+add_opencmiss_environment(test_MoreComplexMesh)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Meshes/MoreComplexMesh/src/MoreComplexMeshExample.f90 b/Meshes/MoreComplexMesh/Fortran/src/MoreComplexMeshExample.f90
similarity index 100%
rename from Meshes/MoreComplexMesh/src/MoreComplexMeshExample.f90
rename to Meshes/MoreComplexMesh/Fortran/src/MoreComplexMeshExample.f90
diff --git a/Meshes/MoreComplexMesh/OpenCMISS.cmake b/Meshes/MoreComplexMesh/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Meshes/MoreComplexMesh/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Meshes/MoreComplexMesh/build_debug/build.sh b/Meshes/MoreComplexMesh/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Meshes/MoreComplexMesh/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Meshes/MoreComplexMeshC/CMakeLists.txt b/Meshes/MoreComplexMeshC/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Meshes/MoreComplexMeshC/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Meshes/MoreComplexMeshC/Fortran/CMakeLists.txt b/Meshes/MoreComplexMeshC/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..e4043e37
--- /dev/null
+++ b/Meshes/MoreComplexMeshC/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(MoreComplexMeshC  src/MoreComplexMeshCExample.c)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(MoreComplexMeshC PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(MoreComplexMeshC PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_MoreComplexMeshC COMMAND MoreComplexMeshC)
+add_opencmiss_environment(test_MoreComplexMeshC)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Meshes/MoreComplexMeshC/src/MoreComplexMeshCExample.c b/Meshes/MoreComplexMeshC/Fortran/src/MoreComplexMeshCExample.c
similarity index 100%
rename from Meshes/MoreComplexMeshC/src/MoreComplexMeshCExample.c
rename to Meshes/MoreComplexMeshC/Fortran/src/MoreComplexMeshCExample.c
diff --git a/Meshes/MoreComplexMeshC/OpenCMISS.cmake b/Meshes/MoreComplexMeshC/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Meshes/MoreComplexMeshC/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Meshes/MoreComplexMeshC/build_debug/build.sh b/Meshes/MoreComplexMeshC/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Meshes/MoreComplexMeshC/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Meshes/MultipleMeshComponents/CMakeLists.txt b/Meshes/MultipleMeshComponents/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Meshes/MultipleMeshComponents/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Meshes/MultipleMeshComponents/Fortran/CMakeLists.txt b/Meshes/MultipleMeshComponents/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..6c10abcd
--- /dev/null
+++ b/Meshes/MultipleMeshComponents/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(MultipleMeshComponents  src/MultipleMeshComponentsExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(MultipleMeshComponents PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(MultipleMeshComponents PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_MultipleMeshComponents COMMAND MultipleMeshComponents)
+add_opencmiss_environment(test_MultipleMeshComponents)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Meshes/MultipleMeshComponents/src/MultipleMeshComponentsExample.f90 b/Meshes/MultipleMeshComponents/Fortran/src/MultipleMeshComponentsExample.f90
similarity index 100%
rename from Meshes/MultipleMeshComponents/src/MultipleMeshComponentsExample.f90
rename to Meshes/MultipleMeshComponents/Fortran/src/MultipleMeshComponentsExample.f90
diff --git a/Meshes/MultipleMeshComponents/OpenCMISS.cmake b/Meshes/MultipleMeshComponents/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Meshes/MultipleMeshComponents/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Meshes/MultipleMeshComponents/build_debug/build.sh b/Meshes/MultipleMeshComponents/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Meshes/MultipleMeshComponents/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Meshes/Simplex/Tetrahedral/Cubic/CMakeLists.txt b/Meshes/Simplex/Tetrahedral/Cubic/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Meshes/Simplex/Tetrahedral/Cubic/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Meshes/Simplex/Tetrahedral/Cubic/Fortran/CMakeLists.txt b/Meshes/Simplex/Tetrahedral/Cubic/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..2e1a82bc
--- /dev/null
+++ b/Meshes/Simplex/Tetrahedral/Cubic/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Cubic  src/CubicExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Cubic PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Cubic PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Cubic COMMAND Cubic)
+add_opencmiss_environment(test_Cubic)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Meshes/Simplex/Tetrahedral/Cubic/src/CubicExample.f90 b/Meshes/Simplex/Tetrahedral/Cubic/Fortran/src/CubicExample.f90
similarity index 100%
rename from Meshes/Simplex/Tetrahedral/Cubic/src/CubicExample.f90
rename to Meshes/Simplex/Tetrahedral/Cubic/Fortran/src/CubicExample.f90
diff --git a/Meshes/Simplex/Tetrahedral/Cubic/OpenCMISS.cmake b/Meshes/Simplex/Tetrahedral/Cubic/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Meshes/Simplex/Tetrahedral/Cubic/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Meshes/Simplex/Tetrahedral/Cubic/build_debug/build.sh b/Meshes/Simplex/Tetrahedral/Cubic/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Meshes/Simplex/Tetrahedral/Cubic/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Meshes/Simplex/Tetrahedral/Linear/CMakeLists.txt b/Meshes/Simplex/Tetrahedral/Linear/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Meshes/Simplex/Tetrahedral/Linear/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Meshes/Simplex/Tetrahedral/Linear/Fortran/CMakeLists.txt b/Meshes/Simplex/Tetrahedral/Linear/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..78e65438
--- /dev/null
+++ b/Meshes/Simplex/Tetrahedral/Linear/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Linear  src/LinearExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Linear PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Linear PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Linear COMMAND Linear)
+add_opencmiss_environment(test_Linear)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Meshes/Simplex/Tetrahedral/Linear/src/LinearExample.f90 b/Meshes/Simplex/Tetrahedral/Linear/Fortran/src/LinearExample.f90
similarity index 100%
rename from Meshes/Simplex/Tetrahedral/Linear/src/LinearExample.f90
rename to Meshes/Simplex/Tetrahedral/Linear/Fortran/src/LinearExample.f90
diff --git a/Meshes/Simplex/Tetrahedral/Linear/OpenCMISS.cmake b/Meshes/Simplex/Tetrahedral/Linear/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Meshes/Simplex/Tetrahedral/Linear/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Meshes/Simplex/Tetrahedral/Linear/build_debug/build.sh b/Meshes/Simplex/Tetrahedral/Linear/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Meshes/Simplex/Tetrahedral/Linear/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Meshes/Simplex/Tetrahedral/Quadratic/CMakeLists.txt b/Meshes/Simplex/Tetrahedral/Quadratic/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Meshes/Simplex/Tetrahedral/Quadratic/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Meshes/Simplex/Tetrahedral/Quadratic/Fortran/CMakeLists.txt b/Meshes/Simplex/Tetrahedral/Quadratic/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..36193b4d
--- /dev/null
+++ b/Meshes/Simplex/Tetrahedral/Quadratic/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Quadratic  src/QuadraticExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Quadratic PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Quadratic PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Quadratic COMMAND Quadratic)
+add_opencmiss_environment(test_Quadratic)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Meshes/Simplex/Tetrahedral/Quadratic/src/QuadraticExample.f90 b/Meshes/Simplex/Tetrahedral/Quadratic/Fortran/src/QuadraticExample.f90
similarity index 100%
rename from Meshes/Simplex/Tetrahedral/Quadratic/src/QuadraticExample.f90
rename to Meshes/Simplex/Tetrahedral/Quadratic/Fortran/src/QuadraticExample.f90
diff --git a/Meshes/Simplex/Tetrahedral/Quadratic/OpenCMISS.cmake b/Meshes/Simplex/Tetrahedral/Quadratic/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Meshes/Simplex/Tetrahedral/Quadratic/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Meshes/Simplex/Tetrahedral/Quadratic/build_debug/build.sh b/Meshes/Simplex/Tetrahedral/Quadratic/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Meshes/Simplex/Tetrahedral/Quadratic/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Meshes/Simplex/Triangular/Cubic/CMakeLists.txt b/Meshes/Simplex/Triangular/Cubic/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Meshes/Simplex/Triangular/Cubic/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Meshes/Simplex/Triangular/Cubic/Fortran/CMakeLists.txt b/Meshes/Simplex/Triangular/Cubic/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..2e1a82bc
--- /dev/null
+++ b/Meshes/Simplex/Triangular/Cubic/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Cubic  src/CubicExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Cubic PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Cubic PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Cubic COMMAND Cubic)
+add_opencmiss_environment(test_Cubic)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Meshes/Simplex/Triangular/Cubic/src/CubicExample.f90 b/Meshes/Simplex/Triangular/Cubic/Fortran/src/CubicExample.f90
similarity index 100%
rename from Meshes/Simplex/Triangular/Cubic/src/CubicExample.f90
rename to Meshes/Simplex/Triangular/Cubic/Fortran/src/CubicExample.f90
diff --git a/Meshes/Simplex/Triangular/Cubic/OpenCMISS.cmake b/Meshes/Simplex/Triangular/Cubic/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Meshes/Simplex/Triangular/Cubic/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Meshes/Simplex/Triangular/Cubic/build_debug/build.sh b/Meshes/Simplex/Triangular/Cubic/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Meshes/Simplex/Triangular/Cubic/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Meshes/Simplex/Triangular/Linear/CMakeLists.txt b/Meshes/Simplex/Triangular/Linear/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Meshes/Simplex/Triangular/Linear/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Meshes/Simplex/Triangular/Linear/Fortran/CMakeLists.txt b/Meshes/Simplex/Triangular/Linear/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..78e65438
--- /dev/null
+++ b/Meshes/Simplex/Triangular/Linear/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Linear  src/LinearExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Linear PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Linear PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Linear COMMAND Linear)
+add_opencmiss_environment(test_Linear)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Meshes/Simplex/Triangular/Linear/src/LinearExample.f90 b/Meshes/Simplex/Triangular/Linear/Fortran/src/LinearExample.f90
similarity index 100%
rename from Meshes/Simplex/Triangular/Linear/src/LinearExample.f90
rename to Meshes/Simplex/Triangular/Linear/Fortran/src/LinearExample.f90
diff --git a/Meshes/Simplex/Triangular/Linear/OpenCMISS.cmake b/Meshes/Simplex/Triangular/Linear/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Meshes/Simplex/Triangular/Linear/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Meshes/Simplex/Triangular/Linear/build_debug/build.sh b/Meshes/Simplex/Triangular/Linear/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Meshes/Simplex/Triangular/Linear/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Meshes/Simplex/Triangular/Quadratic/CMakeLists.txt b/Meshes/Simplex/Triangular/Quadratic/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Meshes/Simplex/Triangular/Quadratic/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Meshes/Simplex/Triangular/Quadratic/Fortran/CMakeLists.txt b/Meshes/Simplex/Triangular/Quadratic/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..36193b4d
--- /dev/null
+++ b/Meshes/Simplex/Triangular/Quadratic/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Quadratic  src/QuadraticExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Quadratic PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Quadratic PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Quadratic COMMAND Quadratic)
+add_opencmiss_environment(test_Quadratic)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Meshes/Simplex/Triangular/Quadratic/src/QuadraticExample.f90 b/Meshes/Simplex/Triangular/Quadratic/Fortran/src/QuadraticExample.f90
similarity index 100%
rename from Meshes/Simplex/Triangular/Quadratic/src/QuadraticExample.f90
rename to Meshes/Simplex/Triangular/Quadratic/Fortran/src/QuadraticExample.f90
diff --git a/Meshes/Simplex/Triangular/Quadratic/OpenCMISS.cmake b/Meshes/Simplex/Triangular/Quadratic/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Meshes/Simplex/Triangular/Quadratic/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Meshes/Simplex/Triangular/Quadratic/build_debug/build.sh b/Meshes/Simplex/Triangular/Quadratic/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Meshes/Simplex/Triangular/Quadratic/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Meshes/Simplex/Triangular/QuadraticSimplexManual/CMakeLists.txt b/Meshes/Simplex/Triangular/QuadraticSimplexManual/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Meshes/Simplex/Triangular/QuadraticSimplexManual/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Meshes/Simplex/Triangular/QuadraticSimplexManual/Fortran/CMakeLists.txt b/Meshes/Simplex/Triangular/QuadraticSimplexManual/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..41467b5e
--- /dev/null
+++ b/Meshes/Simplex/Triangular/QuadraticSimplexManual/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(QuadraticSimplexManual  src/SimplexMeshExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(QuadraticSimplexManual PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(QuadraticSimplexManual PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_QuadraticSimplexManual COMMAND QuadraticSimplexManual)
+add_opencmiss_environment(test_QuadraticSimplexManual)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Meshes/Simplex/Triangular/QuadraticSimplexManual/src/SimplexMeshExample.f90 b/Meshes/Simplex/Triangular/QuadraticSimplexManual/Fortran/src/SimplexMeshExample.f90
similarity index 100%
rename from Meshes/Simplex/Triangular/QuadraticSimplexManual/src/SimplexMeshExample.f90
rename to Meshes/Simplex/Triangular/QuadraticSimplexManual/Fortran/src/SimplexMeshExample.f90
diff --git a/Meshes/Simplex/Triangular/QuadraticSimplexManual/OpenCMISS.cmake b/Meshes/Simplex/Triangular/QuadraticSimplexManual/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Meshes/Simplex/Triangular/QuadraticSimplexManual/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Meshes/Simplex/Triangular/QuadraticSimplexManual/build_debug/build.sh b/Meshes/Simplex/Triangular/QuadraticSimplexManual/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Meshes/Simplex/Triangular/QuadraticSimplexManual/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/Meshes/Versions3DLaplace/CMakeLists.txt b/Meshes/Versions3DLaplace/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/Meshes/Versions3DLaplace/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/Meshes/Versions3DLaplace/Fortran/CMakeLists.txt b/Meshes/Versions3DLaplace/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..67c46664
--- /dev/null
+++ b/Meshes/Versions3DLaplace/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Versions3DLaplace  src/Versions3DLaplaceExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Versions3DLaplace PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Versions3DLaplace PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Versions3DLaplace COMMAND Versions3DLaplace)
+add_opencmiss_environment(test_Versions3DLaplace)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/Meshes/Versions3DLaplace/src/Versions3DLaplaceExample.f90 b/Meshes/Versions3DLaplace/Fortran/src/Versions3DLaplaceExample.f90
similarity index 100%
rename from Meshes/Versions3DLaplace/src/Versions3DLaplaceExample.f90
rename to Meshes/Versions3DLaplace/Fortran/src/Versions3DLaplaceExample.f90
diff --git a/Meshes/Versions3DLaplace/OpenCMISS.cmake b/Meshes/Versions3DLaplace/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/Meshes/Versions3DLaplace/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/Meshes/Versions3DLaplace/build_debug/build.sh b/Meshes/Versions3DLaplace/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/Meshes/Versions3DLaplace/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/simple_geometry/CMakeLists.txt b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/simple_geometry/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/simple_geometry/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/simple_geometry/Fortran/CMakeLists.txt b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/simple_geometry/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..1a6da7cd
--- /dev/null
+++ b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/simple_geometry/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(simple_geometry  src/simple_geometryExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(simple_geometry PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(simple_geometry PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_simple_geometry COMMAND simple_geometry)
+add_opencmiss_environment(test_simple_geometry)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/simple_geometry/src/simple_geometryExample.f90 b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/simple_geometry/Fortran/src/simple_geometryExample.f90
similarity index 100%
rename from MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/simple_geometry/src/simple_geometryExample.f90
rename to MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/simple_geometry/Fortran/src/simple_geometryExample.f90
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/simple_geometry/OpenCMISS.cmake b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/simple_geometry/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/simple_geometry/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/simple_geometry/build_debug/build.sh b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/simple_geometry/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/simple_geometry/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/titin_10/CMakeLists.txt b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/titin_10/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/titin_10/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/titin_10/Fortran/CMakeLists.txt b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/titin_10/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..b4813d14
--- /dev/null
+++ b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/titin_10/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(titin_10  src/titin_10Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(titin_10 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(titin_10 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_titin_10 COMMAND titin_10)
+add_opencmiss_environment(test_titin_10)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/titin_10/src/titin_10Example.f90 b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/titin_10/Fortran/src/titin_10Example.f90
similarity index 100%
rename from MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/titin_10/src/titin_10Example.f90
rename to MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/titin_10/Fortran/src/titin_10Example.f90
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/titin_10/OpenCMISS.cmake b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/titin_10/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/titin_10/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/titin_10/build_debug/build.sh b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/titin_10/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/titin_10/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/while_loop/CMakeLists.txt b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/while_loop/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/while_loop/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/while_loop/Fortran/CMakeLists.txt b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/while_loop/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..9effedf2
--- /dev/null
+++ b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/while_loop/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(while_loop  src/while_loopExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(while_loop PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(while_loop PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_while_loop COMMAND while_loop)
+add_opencmiss_environment(test_while_loop)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/while_loop/src/while_loopExample.f90 b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/while_loop/Fortran/src/while_loopExample.f90
similarity index 100%
rename from MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/while_loop/src/while_loopExample.f90
rename to MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/while_loop/Fortran/src/while_loopExample.f90
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/while_loop/OpenCMISS.cmake b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/while_loop/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/while_loop/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/while_loop/build_debug/build.sh b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/while_loop/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticity1D3DMesh/while_loop/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticitySameMesh/CMakeLists.txt b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticitySameMesh/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticitySameMesh/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticitySameMesh/Fortran/CMakeLists.txt b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticitySameMesh/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..a3337589
--- /dev/null
+++ b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticitySameMesh/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(GudunovMonodomainElasticitySameMesh  src/GudunovMonodomainElasticitySameMeshExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(GudunovMonodomainElasticitySameMesh PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(GudunovMonodomainElasticitySameMesh PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_GudunovMonodomainElasticitySameMesh COMMAND GudunovMonodomainElasticitySameMesh)
+add_opencmiss_environment(test_GudunovMonodomainElasticitySameMesh)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticitySameMesh/src/GudunovMonodomainElasticitySameMeshExample.f90 b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticitySameMesh/Fortran/src/GudunovMonodomainElasticitySameMeshExample.f90
similarity index 100%
rename from MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticitySameMesh/src/GudunovMonodomainElasticitySameMeshExample.f90
rename to MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticitySameMesh/Fortran/src/GudunovMonodomainElasticitySameMeshExample.f90
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticitySameMesh/OpenCMISS.cmake b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticitySameMesh/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticitySameMesh/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticitySameMesh/build_debug/build.sh b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticitySameMesh/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/BioelectricFiniteElasticity/GudunovMonodomainElasticitySameMesh/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/CoupledDiffusionAdvectionDiffusion/CMakeLists.txt b/MultiPhysics/CoupledDiffusionAdvectionDiffusion/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionAdvectionDiffusion/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/CoupledDiffusionAdvectionDiffusion/Fortran/CMakeLists.txt b/MultiPhysics/CoupledDiffusionAdvectionDiffusion/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..0fce269b
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionAdvectionDiffusion/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(CoupledDiffusionAdvectionDiffusion  src/CoupledDiffusionAdvectionDiffusionExample.f90 src/CoupledDiffusionAdvectionDiffusionExample_old.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(CoupledDiffusionAdvectionDiffusion PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(CoupledDiffusionAdvectionDiffusion PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_CoupledDiffusionAdvectionDiffusion COMMAND CoupledDiffusionAdvectionDiffusion)
+add_opencmiss_environment(test_CoupledDiffusionAdvectionDiffusion)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/CoupledDiffusionAdvectionDiffusion/src/CoupledDiffusionAdvectionDiffusionExample.f90 b/MultiPhysics/CoupledDiffusionAdvectionDiffusion/Fortran/src/CoupledDiffusionAdvectionDiffusionExample.f90
similarity index 100%
rename from MultiPhysics/CoupledDiffusionAdvectionDiffusion/src/CoupledDiffusionAdvectionDiffusionExample.f90
rename to MultiPhysics/CoupledDiffusionAdvectionDiffusion/Fortran/src/CoupledDiffusionAdvectionDiffusionExample.f90
diff --git a/MultiPhysics/CoupledDiffusionAdvectionDiffusion/src/CoupledDiffusionAdvectionDiffusionExample_old.f90 b/MultiPhysics/CoupledDiffusionAdvectionDiffusion/Fortran/src/CoupledDiffusionAdvectionDiffusionExample_old.f90
similarity index 100%
rename from MultiPhysics/CoupledDiffusionAdvectionDiffusion/src/CoupledDiffusionAdvectionDiffusionExample_old.f90
rename to MultiPhysics/CoupledDiffusionAdvectionDiffusion/Fortran/src/CoupledDiffusionAdvectionDiffusionExample_old.f90
diff --git a/MultiPhysics/CoupledDiffusionAdvectionDiffusion/OpenCMISS.cmake b/MultiPhysics/CoupledDiffusionAdvectionDiffusion/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionAdvectionDiffusion/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/CoupledDiffusionAdvectionDiffusion/build_debug/build.sh b/MultiPhysics/CoupledDiffusionAdvectionDiffusion/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionAdvectionDiffusion/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/CoupledDiffusionDiffusion/CMakeLists.txt b/MultiPhysics/CoupledDiffusionDiffusion/CoupledDiffusionDiffusion/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/CoupledDiffusionDiffusion/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/CoupledDiffusionDiffusion/Fortran/CMakeLists.txt b/MultiPhysics/CoupledDiffusionDiffusion/CoupledDiffusionDiffusion/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..fc100426
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/CoupledDiffusionDiffusion/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(CoupledDiffusionDiffusion  src/CoupledDiffusionDiffusionExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(CoupledDiffusionDiffusion PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(CoupledDiffusionDiffusion PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_CoupledDiffusionDiffusion COMMAND CoupledDiffusionDiffusion)
+add_opencmiss_environment(test_CoupledDiffusionDiffusion)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/CoupledDiffusionDiffusion/src/CoupledDiffusionDiffusionExample.f90 b/MultiPhysics/CoupledDiffusionDiffusion/CoupledDiffusionDiffusion/Fortran/src/CoupledDiffusionDiffusionExample.f90
similarity index 100%
rename from MultiPhysics/CoupledDiffusionDiffusion/CoupledDiffusionDiffusion/src/CoupledDiffusionDiffusionExample.f90
rename to MultiPhysics/CoupledDiffusionDiffusion/CoupledDiffusionDiffusion/Fortran/src/CoupledDiffusionDiffusionExample.f90
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/CoupledDiffusionDiffusion/OpenCMISS.cmake b/MultiPhysics/CoupledDiffusionDiffusion/CoupledDiffusionDiffusion/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/CoupledDiffusionDiffusion/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/CoupledDiffusionDiffusion/build_debug/build.sh b/MultiPhysics/CoupledDiffusionDiffusion/CoupledDiffusionDiffusion/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/CoupledDiffusionDiffusion/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicAnalyticTestThreeCompThreeDim/CMakeLists.txt b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicAnalyticTestThreeCompThreeDim/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicAnalyticTestThreeCompThreeDim/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicAnalyticTestThreeCompThreeDim/Fortran/CMakeLists.txt b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicAnalyticTestThreeCompThreeDim/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..f89e43b1
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicAnalyticTestThreeCompThreeDim/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(MonolithicAnalyticTestThreeCompThreeDim  src/MonolithicAnalyticTestThreeCompThreeDimExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(MonolithicAnalyticTestThreeCompThreeDim PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(MonolithicAnalyticTestThreeCompThreeDim PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_MonolithicAnalyticTestThreeCompThreeDim COMMAND MonolithicAnalyticTestThreeCompThreeDim)
+add_opencmiss_environment(test_MonolithicAnalyticTestThreeCompThreeDim)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicAnalyticTestThreeCompThreeDim/src/MonolithicAnalyticTestThreeCompThreeDimExample.f90 b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicAnalyticTestThreeCompThreeDim/Fortran/src/MonolithicAnalyticTestThreeCompThreeDimExample.f90
similarity index 100%
rename from MultiPhysics/CoupledDiffusionDiffusion/MonolithicAnalyticTestThreeCompThreeDim/src/MonolithicAnalyticTestThreeCompThreeDimExample.f90
rename to MultiPhysics/CoupledDiffusionDiffusion/MonolithicAnalyticTestThreeCompThreeDim/Fortran/src/MonolithicAnalyticTestThreeCompThreeDimExample.f90
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicAnalyticTestThreeCompThreeDim/OpenCMISS.cmake b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicAnalyticTestThreeCompThreeDim/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicAnalyticTestThreeCompThreeDim/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicAnalyticTestThreeCompThreeDim/build_debug/build.sh b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicAnalyticTestThreeCompThreeDim/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicAnalyticTestThreeCompThreeDim/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest/CMakeLists.txt b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest/Fortran/CMakeLists.txt b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..44a2cb71
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(MonolithicSchemeTest  src/MonolithicSchemeTestExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(MonolithicSchemeTest PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(MonolithicSchemeTest PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_MonolithicSchemeTest COMMAND MonolithicSchemeTest)
+add_opencmiss_environment(test_MonolithicSchemeTest)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest/src/MonolithicSchemeTestExample.f90 b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest/Fortran/src/MonolithicSchemeTestExample.f90
similarity index 100%
rename from MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest/src/MonolithicSchemeTestExample.f90
rename to MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest/Fortran/src/MonolithicSchemeTestExample.f90
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest/OpenCMISS.cmake b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest/build_debug/build.sh b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTestAnalytic/CMakeLists.txt b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTestAnalytic/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTestAnalytic/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTestAnalytic/Fortran/CMakeLists.txt b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTestAnalytic/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..f492b50d
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTestAnalytic/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(MonolithicSchemeTestAnalytic  src/MonolithicSchemeTestAnalyticExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(MonolithicSchemeTestAnalytic PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(MonolithicSchemeTestAnalytic PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_MonolithicSchemeTestAnalytic COMMAND MonolithicSchemeTestAnalytic)
+add_opencmiss_environment(test_MonolithicSchemeTestAnalytic)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTestAnalytic/src/MonolithicSchemeTestAnalyticExample.f90 b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTestAnalytic/Fortran/src/MonolithicSchemeTestAnalyticExample.f90
similarity index 100%
rename from MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTestAnalytic/src/MonolithicSchemeTestAnalyticExample.f90
rename to MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTestAnalytic/Fortran/src/MonolithicSchemeTestAnalyticExample.f90
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTestAnalytic/OpenCMISS.cmake b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTestAnalytic/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTestAnalytic/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTestAnalytic/build_debug/build.sh b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTestAnalytic/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTestAnalytic/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest_FieldML/CMakeLists.txt b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest_FieldML/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest_FieldML/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest_FieldML/Fortran/CMakeLists.txt b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest_FieldML/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..0bc41fdf
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest_FieldML/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(MonolithicSchemeTest_FieldML  src/MonolithicSchemeTest_FieldMLExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(MonolithicSchemeTest_FieldML PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(MonolithicSchemeTest_FieldML PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_MonolithicSchemeTest_FieldML COMMAND MonolithicSchemeTest_FieldML)
+add_opencmiss_environment(test_MonolithicSchemeTest_FieldML)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest_FieldML/src/MonolithicSchemeTest_FieldMLExample.f90 b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest_FieldML/Fortran/src/MonolithicSchemeTest_FieldMLExample.f90
similarity index 100%
rename from MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest_FieldML/src/MonolithicSchemeTest_FieldMLExample.f90
rename to MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest_FieldML/Fortran/src/MonolithicSchemeTest_FieldMLExample.f90
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest_FieldML/OpenCMISS.cmake b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest_FieldML/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest_FieldML/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest_FieldML/build_debug/build.sh b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest_FieldML/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/CoupledDiffusionDiffusion/MonolithicSchemeTest_FieldML/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/MultiCompTransport/MultiCompAdvectionDiffusion/MonolithicSchemeAdvectionDiffusion_FieldML/CMakeLists.txt b/MultiPhysics/MultiCompTransport/MultiCompAdvectionDiffusion/MonolithicSchemeAdvectionDiffusion_FieldML/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/MultiCompTransport/MultiCompAdvectionDiffusion/MonolithicSchemeAdvectionDiffusion_FieldML/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/MultiCompTransport/MultiCompAdvectionDiffusion/MonolithicSchemeAdvectionDiffusion_FieldML/Fortran/CMakeLists.txt b/MultiPhysics/MultiCompTransport/MultiCompAdvectionDiffusion/MonolithicSchemeAdvectionDiffusion_FieldML/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..c50ad3bd
--- /dev/null
+++ b/MultiPhysics/MultiCompTransport/MultiCompAdvectionDiffusion/MonolithicSchemeAdvectionDiffusion_FieldML/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(MonolithicSchemeAdvectionDiffusion_FieldML  src/MonolithicSchemeAdvectionDiffusion_FieldMLExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(MonolithicSchemeAdvectionDiffusion_FieldML PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(MonolithicSchemeAdvectionDiffusion_FieldML PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_MonolithicSchemeAdvectionDiffusion_FieldML COMMAND MonolithicSchemeAdvectionDiffusion_FieldML)
+add_opencmiss_environment(test_MonolithicSchemeAdvectionDiffusion_FieldML)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/MultiCompTransport/MultiCompAdvectionDiffusion/MonolithicSchemeAdvectionDiffusion_FieldML/src/MonolithicSchemeAdvectionDiffusion_FieldMLExample.f90 b/MultiPhysics/MultiCompTransport/MultiCompAdvectionDiffusion/MonolithicSchemeAdvectionDiffusion_FieldML/Fortran/src/MonolithicSchemeAdvectionDiffusion_FieldMLExample.f90
similarity index 100%
rename from MultiPhysics/MultiCompTransport/MultiCompAdvectionDiffusion/MonolithicSchemeAdvectionDiffusion_FieldML/src/MonolithicSchemeAdvectionDiffusion_FieldMLExample.f90
rename to MultiPhysics/MultiCompTransport/MultiCompAdvectionDiffusion/MonolithicSchemeAdvectionDiffusion_FieldML/Fortran/src/MonolithicSchemeAdvectionDiffusion_FieldMLExample.f90
diff --git a/MultiPhysics/MultiCompTransport/MultiCompAdvectionDiffusion/MonolithicSchemeAdvectionDiffusion_FieldML/OpenCMISS.cmake b/MultiPhysics/MultiCompTransport/MultiCompAdvectionDiffusion/MonolithicSchemeAdvectionDiffusion_FieldML/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/MultiCompTransport/MultiCompAdvectionDiffusion/MonolithicSchemeAdvectionDiffusion_FieldML/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/MultiCompTransport/MultiCompAdvectionDiffusion/MonolithicSchemeAdvectionDiffusion_FieldML/build_debug/build.sh b/MultiPhysics/MultiCompTransport/MultiCompAdvectionDiffusion/MonolithicSchemeAdvectionDiffusion_FieldML/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/MultiCompTransport/MultiCompAdvectionDiffusion/MonolithicSchemeAdvectionDiffusion_FieldML/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenDarcy/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenDarcy/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenDarcy/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenDarcy/Fortran/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenDarcy/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..75c0e4f3
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenDarcy/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(CylinderInflationDrivenDarcy  src/CylinderInflationDrivenDarcyExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(CylinderInflationDrivenDarcy PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(CylinderInflationDrivenDarcy PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_CylinderInflationDrivenDarcy COMMAND CylinderInflationDrivenDarcy)
+add_opencmiss_environment(test_CylinderInflationDrivenDarcy)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenDarcy/src/CylinderInflationDrivenDarcyExample.f90 b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenDarcy/Fortran/src/CylinderInflationDrivenDarcyExample.f90
similarity index 100%
rename from MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenDarcy/src/CylinderInflationDrivenDarcyExample.f90
rename to MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenDarcy/Fortran/src/CylinderInflationDrivenDarcyExample.f90
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenDarcy/OpenCMISS.cmake b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenDarcy/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenDarcy/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenDarcy/build_debug/build.sh b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenDarcy/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenDarcy/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenMultiCompDarcy/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenMultiCompDarcy/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenMultiCompDarcy/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenMultiCompDarcy/Fortran/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenMultiCompDarcy/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..90dd8b72
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenMultiCompDarcy/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(CylinderInflationDrivenMultiCompDarcy  src/CylinderInflationDrivenMultiCompDarcyExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(CylinderInflationDrivenMultiCompDarcy PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(CylinderInflationDrivenMultiCompDarcy PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_CylinderInflationDrivenMultiCompDarcy COMMAND CylinderInflationDrivenMultiCompDarcy)
+add_opencmiss_environment(test_CylinderInflationDrivenMultiCompDarcy)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenMultiCompDarcy/src/CylinderInflationDrivenMultiCompDarcyExample.f90 b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenMultiCompDarcy/Fortran/src/CylinderInflationDrivenMultiCompDarcyExample.f90
similarity index 100%
rename from MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenMultiCompDarcy/src/CylinderInflationDrivenMultiCompDarcyExample.f90
rename to MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenMultiCompDarcy/Fortran/src/CylinderInflationDrivenMultiCompDarcyExample.f90
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenMultiCompDarcy/OpenCMISS.cmake b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenMultiCompDarcy/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenMultiCompDarcy/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenMultiCompDarcy/build_debug/build.sh b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenMultiCompDarcy/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/CylinderInflationDrivenMultiCompDarcy/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompElastDrivenDarcy_AnalyticDarcy/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompElastDrivenDarcy_AnalyticDarcy/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompElastDrivenDarcy_AnalyticDarcy/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompElastDrivenDarcy_AnalyticDarcy/Fortran/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompElastDrivenDarcy_AnalyticDarcy/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..a6a12071
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompElastDrivenDarcy_AnalyticDarcy/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(IncompElastDrivenDarcy_AnalyticDarcy  src/IncompElastDrivenDarcy_AnalyticDarcyExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(IncompElastDrivenDarcy_AnalyticDarcy PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(IncompElastDrivenDarcy_AnalyticDarcy PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_IncompElastDrivenDarcy_AnalyticDarcy COMMAND IncompElastDrivenDarcy_AnalyticDarcy)
+add_opencmiss_environment(test_IncompElastDrivenDarcy_AnalyticDarcy)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompElastDrivenDarcy_AnalyticDarcy/src/IncompElastDrivenDarcy_AnalyticDarcyExample.f90 b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompElastDrivenDarcy_AnalyticDarcy/Fortran/src/IncompElastDrivenDarcy_AnalyticDarcyExample.f90
similarity index 100%
rename from MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompElastDrivenDarcy_AnalyticDarcy/src/IncompElastDrivenDarcy_AnalyticDarcyExample.f90
rename to MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompElastDrivenDarcy_AnalyticDarcy/Fortran/src/IncompElastDrivenDarcy_AnalyticDarcyExample.f90
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompElastDrivenDarcy_AnalyticDarcy/OpenCMISS.cmake b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompElastDrivenDarcy_AnalyticDarcy/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompElastDrivenDarcy_AnalyticDarcy/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompElastDrivenDarcy_AnalyticDarcy/build_debug/build.sh b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompElastDrivenDarcy_AnalyticDarcy/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompElastDrivenDarcy_AnalyticDarcy/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcy/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcy/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcy/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcy/Fortran/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcy/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..10f5c7ae
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcy/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(IncompressibleElasticityDrivenDarcy  src/IncompressibleElasticityDrivenDarcyExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(IncompressibleElasticityDrivenDarcy PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(IncompressibleElasticityDrivenDarcy PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_IncompressibleElasticityDrivenDarcy COMMAND IncompressibleElasticityDrivenDarcy)
+add_opencmiss_environment(test_IncompressibleElasticityDrivenDarcy)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcy/src/IncompressibleElasticityDrivenDarcyExample.f90 b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcy/Fortran/src/IncompressibleElasticityDrivenDarcyExample.f90
similarity index 100%
rename from MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcy/src/IncompressibleElasticityDrivenDarcyExample.f90
rename to MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcy/Fortran/src/IncompressibleElasticityDrivenDarcyExample.f90
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcy/OpenCMISS.cmake b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcy/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcy/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcy/build_debug/build.sh b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcy/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcy/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO/Fortran/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..56c7961a
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(IncompressibleElasticityDrivenDarcyIO  src/IncompressibleElasticityDrivenDarcyIOExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(IncompressibleElasticityDrivenDarcyIO PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(IncompressibleElasticityDrivenDarcyIO PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_IncompressibleElasticityDrivenDarcyIO COMMAND IncompressibleElasticityDrivenDarcyIO)
+add_opencmiss_environment(test_IncompressibleElasticityDrivenDarcyIO)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO/src/IncompressibleElasticityDrivenDarcyIOExample.f90 b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO/Fortran/src/IncompressibleElasticityDrivenDarcyIOExample.f90
similarity index 100%
rename from MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO/src/IncompressibleElasticityDrivenDarcyIOExample.f90
rename to MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO/Fortran/src/IncompressibleElasticityDrivenDarcyIOExample.f90
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO/OpenCMISS.cmake b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO/build_debug/build.sh b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO2/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO2/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO2/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO2/Fortran/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO2/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..bd8461aa
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO2/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(IncompressibleElasticityDrivenDarcyIO2  src/IncompressibleElasticityDrivenDarcyIO2Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(IncompressibleElasticityDrivenDarcyIO2 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(IncompressibleElasticityDrivenDarcyIO2 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_IncompressibleElasticityDrivenDarcyIO2 COMMAND IncompressibleElasticityDrivenDarcyIO2)
+add_opencmiss_environment(test_IncompressibleElasticityDrivenDarcyIO2)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO2/src/IncompressibleElasticityDrivenDarcyIO2Example.f90 b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO2/Fortran/src/IncompressibleElasticityDrivenDarcyIO2Example.f90
similarity index 100%
rename from MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO2/src/IncompressibleElasticityDrivenDarcyIO2Example.f90
rename to MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO2/Fortran/src/IncompressibleElasticityDrivenDarcyIO2Example.f90
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO2/OpenCMISS.cmake b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO2/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO2/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO2/build_debug/build.sh b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO2/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO2/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/Fortran/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..c3723240
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(IncompressibleElasticityDrivenDarcyIO3  src/IncompressibleElasticityDrivenDarcyIO3Example.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(IncompressibleElasticityDrivenDarcyIO3 PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(IncompressibleElasticityDrivenDarcyIO3 PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_IncompressibleElasticityDrivenDarcyIO3 COMMAND IncompressibleElasticityDrivenDarcyIO3)
+add_opencmiss_environment(test_IncompressibleElasticityDrivenDarcyIO3)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/src/IncompressibleElasticityDrivenDarcyIO3Example.f90 b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/Fortran/src/IncompressibleElasticityDrivenDarcyIO3Example.f90
similarity index 100%
rename from MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/src/IncompressibleElasticityDrivenDarcyIO3Example.f90
rename to MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/Fortran/src/IncompressibleElasticityDrivenDarcyIO3Example.f90
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/OpenCMISS.cmake b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/build_debug/build.sh b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyIO3/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/Fortran/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..4735b14d
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(IncompressibleElasticityDrivenDarcyMatSolve  src/IncompressibleElasticityDrivenDarcyMatSolveExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(IncompressibleElasticityDrivenDarcyMatSolve PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(IncompressibleElasticityDrivenDarcyMatSolve PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_IncompressibleElasticityDrivenDarcyMatSolve COMMAND IncompressibleElasticityDrivenDarcyMatSolve)
+add_opencmiss_environment(test_IncompressibleElasticityDrivenDarcyMatSolve)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/src/IncompressibleElasticityDrivenDarcyMatSolveExample.f90 b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/Fortran/src/IncompressibleElasticityDrivenDarcyMatSolveExample.f90
similarity index 100%
rename from MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/src/IncompressibleElasticityDrivenDarcyMatSolveExample.f90
rename to MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/Fortran/src/IncompressibleElasticityDrivenDarcyMatSolveExample.f90
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/OpenCMISS.cmake b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/build_debug/build.sh b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenDarcyMatSolve/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/Fortran/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..e0a66874
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(IncompressibleElasticityDrivenMultiCompDarcy  src/IncompressibleElasticityDrivenMultiCompDarcyExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(IncompressibleElasticityDrivenMultiCompDarcy PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(IncompressibleElasticityDrivenMultiCompDarcy PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_IncompressibleElasticityDrivenMultiCompDarcy COMMAND IncompressibleElasticityDrivenMultiCompDarcy)
+add_opencmiss_environment(test_IncompressibleElasticityDrivenMultiCompDarcy)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/src/IncompressibleElasticityDrivenMultiCompDarcyExample.f90 b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/Fortran/src/IncompressibleElasticityDrivenMultiCompDarcyExample.f90
similarity index 100%
rename from MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/src/IncompressibleElasticityDrivenMultiCompDarcyExample.f90
rename to MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/Fortran/src/IncompressibleElasticityDrivenMultiCompDarcyExample.f90
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/OpenCMISS.cmake b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/build_debug/build.sh b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcy/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/Fortran/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..89df600d
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(IncompressibleElasticityDrivenMultiCompDarcyIO  src/IncompressibleElasticityDrivenMultiCompDarcyIOExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(IncompressibleElasticityDrivenMultiCompDarcyIO PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(IncompressibleElasticityDrivenMultiCompDarcyIO PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_IncompressibleElasticityDrivenMultiCompDarcyIO COMMAND IncompressibleElasticityDrivenMultiCompDarcyIO)
+add_opencmiss_environment(test_IncompressibleElasticityDrivenMultiCompDarcyIO)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/src/IncompressibleElasticityDrivenMultiCompDarcyIOExample.f90 b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/Fortran/src/IncompressibleElasticityDrivenMultiCompDarcyIOExample.f90
similarity index 100%
rename from MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/src/IncompressibleElasticityDrivenMultiCompDarcyIOExample.f90
rename to MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/Fortran/src/IncompressibleElasticityDrivenMultiCompDarcyIOExample.f90
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/OpenCMISS.cmake b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/build_debug/build.sh b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/IncompressibleElasticityDrivenMultiCompDarcyIO/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/Fortran/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..fe950854
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(InriaModel  src/InriaModelExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(InriaModel PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(InriaModel PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_InriaModel COMMAND InriaModel)
+add_opencmiss_environment(test_InriaModel)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/src/InriaModelExample.f90 b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/Fortran/src/InriaModelExample.f90
similarity index 100%
rename from MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/src/InriaModelExample.f90
rename to MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/Fortran/src/InriaModelExample.f90
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/OpenCMISS.cmake b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/build_debug/build.sh b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/InriaModel/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/Fortran/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..77a5ac5d
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(QuadraticEllipsoidDrivenDarcy  src/QuadraticEllipsoidDrivenDarcyExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(QuadraticEllipsoidDrivenDarcy PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(QuadraticEllipsoidDrivenDarcy PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_QuadraticEllipsoidDrivenDarcy COMMAND QuadraticEllipsoidDrivenDarcy)
+add_opencmiss_environment(test_QuadraticEllipsoidDrivenDarcy)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/src/QuadraticEllipsoidDrivenDarcyExample.f90 b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/Fortran/src/QuadraticEllipsoidDrivenDarcyExample.f90
similarity index 100%
rename from MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/src/QuadraticEllipsoidDrivenDarcyExample.f90
rename to MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/Fortran/src/QuadraticEllipsoidDrivenDarcyExample.f90
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/OpenCMISS.cmake b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/build_debug/build.sh b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenDarcy/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/Fortran/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..402d64b2
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(QuadraticEllipsoidDrivenMultiCompDarcy  src/QuadraticEllipsoidDrivenMultiCompDarcyExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(QuadraticEllipsoidDrivenMultiCompDarcy PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(QuadraticEllipsoidDrivenMultiCompDarcy PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_QuadraticEllipsoidDrivenMultiCompDarcy COMMAND QuadraticEllipsoidDrivenMultiCompDarcy)
+add_opencmiss_environment(test_QuadraticEllipsoidDrivenMultiCompDarcy)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/src/QuadraticEllipsoidDrivenMultiCompDarcyExample.f90 b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/Fortran/src/QuadraticEllipsoidDrivenMultiCompDarcyExample.f90
similarity index 100%
rename from MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/src/QuadraticEllipsoidDrivenMultiCompDarcyExample.f90
rename to MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/Fortran/src/QuadraticEllipsoidDrivenMultiCompDarcyExample.f90
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/OpenCMISS.cmake b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/build_debug/build.sh b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/QuadraticEllipsoidDrivenMultiCompDarcy/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/Fortran/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..3e94c509
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(SameRegionSameMesh  src/SameRegionSameMeshExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(SameRegionSameMesh PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(SameRegionSameMesh PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_SameRegionSameMesh COMMAND SameRegionSameMesh)
+add_opencmiss_environment(test_SameRegionSameMesh)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/src/SameRegionSameMeshExample.f90 b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/Fortran/src/SameRegionSameMeshExample.f90
similarity index 100%
rename from MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/src/SameRegionSameMeshExample.f90
rename to MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/Fortran/src/SameRegionSameMeshExample.f90
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/OpenCMISS.cmake b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/build_debug/build.sh b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityDarcy/SameRegionSameMesh/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/Fortran/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..903c30d8
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(Cantilever  src/CantileverExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(Cantilever PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(Cantilever PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_Cantilever COMMAND Cantilever)
+add_opencmiss_environment(test_Cantilever)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/src/CantileverExample.f90 b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/Fortran/src/CantileverExample.f90
similarity index 100%
rename from MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/src/CantileverExample.f90
rename to MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/Fortran/src/CantileverExample.f90
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/OpenCMISS.cmake b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/build_debug/build.sh b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/Cantilever/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/Fortran/CMakeLists.txt b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..7f48f045
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(StaticExtension  src/StaticExtensionExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(StaticExtension PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(StaticExtension PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_StaticExtension COMMAND StaticExtension)
+add_opencmiss_environment(test_StaticExtension)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/src/StaticExtensionExample.f90 b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/Fortran/src/StaticExtensionExample.f90
similarity index 100%
rename from MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/src/StaticExtensionExample.f90
rename to MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/Fortran/src/StaticExtensionExample.f90
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/OpenCMISS.cmake b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/build_debug/build.sh b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/MultiPhysics/Poroelasticity/FiniteElasticityFluidPressure/StaticExtension/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/TwoRegions/CMakeLists.txt b/TwoRegions/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/TwoRegions/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/TwoRegions/Fortran/CMakeLists.txt b/TwoRegions/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..6cf55aca
--- /dev/null
+++ b/TwoRegions/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(TwoRegions  src/TwoRegionsExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(TwoRegions PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(TwoRegions PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_TwoRegions COMMAND TwoRegions)
+add_opencmiss_environment(test_TwoRegions)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/TwoRegions/src/TwoRegionsExample.f90 b/TwoRegions/Fortran/src/TwoRegionsExample.f90
similarity index 100%
rename from TwoRegions/src/TwoRegionsExample.f90
rename to TwoRegions/Fortran/src/TwoRegionsExample.f90
diff --git a/TwoRegions/OpenCMISS.cmake b/TwoRegions/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/TwoRegions/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/TwoRegions/build_debug/build.sh b/TwoRegions/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/TwoRegions/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/cellml/CMakeLists.txt b/cellml/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/cellml/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/cellml/Fortran/CMakeLists.txt b/cellml/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..e06c6dff
--- /dev/null
+++ b/cellml/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(cellml  src/FortranExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(cellml PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(cellml PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_cellml COMMAND cellml)
+add_opencmiss_environment(test_cellml)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/cellml/OpenCMISS.cmake b/cellml/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/cellml/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/cellml/build_debug/build.sh b/cellml/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/cellml/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/cellml/model-integration/CMakeLists.txt b/cellml/model-integration/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/cellml/model-integration/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/cellml/model-integration/Fortran/CMakeLists.txt b/cellml/model-integration/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..9ff021fe
--- /dev/null
+++ b/cellml/model-integration/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(model-integration  src/FortranExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(model-integration PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(model-integration PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_model-integration COMMAND model-integration)
+add_opencmiss_environment(test_model-integration)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/cellml/model-integration/OpenCMISS.cmake b/cellml/model-integration/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/cellml/model-integration/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/cellml/model-integration/build_debug/build.sh b/cellml/model-integration/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/cellml/model-integration/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/define-geometry-and-export/CMakeLists.txt b/define-geometry-and-export/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/define-geometry-and-export/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/define-geometry-and-export/Fortran/CMakeLists.txt b/define-geometry-and-export/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..ebe0ede0
--- /dev/null
+++ b/define-geometry-and-export/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(define-geometry-and-export  src/define-geometry-and-exportExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(define-geometry-and-export PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(define-geometry-and-export PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_define-geometry-and-export COMMAND define-geometry-and-export)
+add_opencmiss_environment(test_define-geometry-and-export)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/define-geometry-and-export/src/define-geometry-and-exportExample.f90 b/define-geometry-and-export/Fortran/src/define-geometry-and-exportExample.f90
similarity index 100%
rename from define-geometry-and-export/src/define-geometry-and-exportExample.f90
rename to define-geometry-and-export/Fortran/src/define-geometry-and-exportExample.f90
diff --git a/define-geometry-and-export/OpenCMISS.cmake b/define-geometry-and-export/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/define-geometry-and-export/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/define-geometry-and-export/build_debug/build.sh b/define-geometry-and-export/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/define-geometry-and-export/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/scripts/create_cmakefiles.py b/scripts/create_cmakefiles.py
new file mode 100755
index 00000000..522ef4a1
--- /dev/null
+++ b/scripts/create_cmakefiles.py
@@ -0,0 +1,114 @@
+#!/usr/bin/env python
+# -*- coding: utf-8 -*-
+import sys
+import numpy as np
+import matplotlib.pyplot as plt
+import csv
+import collections
+import copy
+from sets import Set
+import os
+from shutil import copyfile
+
+cmake_content = """
+# Add example executable
+add_executable({executable_name} {src})
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options({executable_name} PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries({executable_name} PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_{executable_name} COMMAND {executable_name})
+add_opencmiss_environment(test_{executable_name})
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
+"""
+
+
+for (dirpath, subdirectories, filenames) in os.walk(".."):
+  print "directory {}".format(dirpath)
+  src_found = False
+  if "src" in subdirectories:
+    directory_content = os.listdir(os.path.join(dirpath, "src"))
+    if os.path.basename(dirpath) != "Fortran":
+      #os.mkdir("Fortran")
+      print 'rename "{}" to "{}"'.format(os.path.join(dirpath,"src"), os.path.join(dirpath,"Fortran","src"))
+      try:
+        os.mkdir(os.path.join(dirpath,"Fortran"))
+      except:
+        pass
+      os.rename(os.path.join(dirpath,"src"), os.path.join(dirpath,"Fortran","src"))
+      src_found = True
+    
+  if "Fortran" in subdirectories:
+    src_found = True
+      
+  if src_found:
+    print "process directory {}".format(dirpath)
+    
+    
+    copyfile("resources/CMakeLists-1.txt", os.path.join(dirpath,"CMakeLists.txt"))
+    copyfile("resources/OpenCMISS.cmake", os.path.join(dirpath,"OpenCMISS.cmake"))
+    
+    src_files = os.listdir(os.path.join(dirpath, "Fortran","src"))
+    src_string = ""
+    for filename in src_files:
+      src_string += " src/"+filename
+    executable_name = os.path.basename(dirpath)
+    
+    with open(os.path.join(dirpath,"Fortran","CMakeLists.txt"),'w') as file:
+      file.write(cmake_content.format(src=src_string, executable_name=executable_name, PROC_OPT="{PROC_OPT}", OPT="{OPT}", EXAMPLE_BINARY="{EXAMPLE_BINARY}"))
+      
+    try:
+      os.mkdir(os.path.join(dirpath,"build_debug"))
+    except:
+      pass
+    copyfile("resources/build.sh", os.path.join(dirpath,"build_debug","build.sh"))
diff --git a/scripts/resources/CMakeLists-1.txt b/scripts/resources/CMakeLists-1.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/scripts/resources/CMakeLists-1.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/scripts/resources/OpenCMISS.cmake b/scripts/resources/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/scripts/resources/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/scripts/resources/build.sh b/scripts/resources/build.sh
new file mode 100755
index 00000000..e6624bac
--- /dev/null
+++ b/scripts/resources/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
diff --git a/simple-field-manipulation-direct-access/CMakeLists.txt b/simple-field-manipulation-direct-access/CMakeLists.txt
new file mode 100644
index 00000000..a22b61ee
--- /dev/null
+++ b/simple-field-manipulation-direct-access/CMakeLists.txt
@@ -0,0 +1,35 @@
+# OpenCMISS (Open Continuum Mechanics, Imaging, Signal processing and System identification)
+# is a mathematical modelling environment that enables the application of finite element
+# analysis techniques to a variety of complex bioengineering problems.
+# 
+# The OpenCMISS project website can be found at http://www.opencmiss.org
+# For more information see http://www.opencmiss.org/documentation
+
+# Include the OpenCMISS initalisation & macro definition file.
+include(./OpenCMISS.cmake)
+
+# Project setup
+# -------------
+cmake_minimum_required(VERSION 3.3 FATAL_ERROR)
+project(OpenCMISS-Example VERSION 1.0 LANGUAGES C)
+enable_language(Fortran OPTIONAL)
+enable_testing()
+
+# Find OpenCMISS
+# --------------
+#
+# This call tries to find a matching OpenCMISS (SDK) installation for your (default) Toolchain and MPI choice. 
+# Currently available OpenCMISS package components: Iron Zinc
+# Requiring Iron will also include the iron_c bindings target if available.
+#
+# This function creates a link target 'opencmiss' that contains references to the requested OpenCMISS components.
+# For Iron, it also adds the necessary MPI information - no further find_package(MPI ..) and setting of extra include
+# paths needed!               
+find_package(OpenCMISS 1.1 REQUIRED COMPONENTS Iron CONFIG)
+
+# CMake application code
+# ----------------------
+#add_subdirectory(C)
+if (CMAKE_Fortran_COMPILER)
+    add_subdirectory(Fortran)
+endif()
diff --git a/simple-field-manipulation-direct-access/Fortran/CMakeLists.txt b/simple-field-manipulation-direct-access/Fortran/CMakeLists.txt
new file mode 100644
index 00000000..559a1911
--- /dev/null
+++ b/simple-field-manipulation-direct-access/Fortran/CMakeLists.txt
@@ -0,0 +1,60 @@
+
+# Add example executable
+add_executable(simple-field-manipulation-direct-access  src/simple-field-manipulation-direct-accessExample.f90)
+
+# Turn on Fortran preprocessing (#include directives)
+if (MSVC)
+    set(PROC_OPT "/fpp")
+else()
+    set(PROC_OPT "-cpp")
+endif()
+
+# in debug mode, add flag that make Floating point exceptions fatal
+set(OPT "")
+if (FALSE)
+    if(CMAKE_BUILD_TYPE MATCHES DEBUG)
+        set(OPT "-ffpe-trap=invalid,zero,underflow,overflow,denormal")		# GCC: make floating point exceptions fatal
+    endif()
+endif()
+
+target_compile_options(simple-field-manipulation-direct-access PRIVATE ${PROC_OPT} ${OPT} "-fbacktrace")
+
+# Link to opencmiss
+# -----------------
+#
+# This simply uses the opencmiss target created by OC_INIT() above.
+#
+# Alternatively, you can also directly invoke 'find_package(Iron <IRON_VERSION>)' to explicitly
+# require that version. But then you have to deal with setting up the correct MPI include directives and library paths.
+#
+# If required, add any other required link libraries (cellml, petsc ..) here, too.
+# For example, if you needed PetSC functionality, issue
+#
+#     find_package(PETSC <PETSC_VERSION> REQUIRED)
+#     target_link_libraries(${EXAMPLE_BINARY} PRIVATE petsc)
+#
+# All the OpenCMISS dependencies provide a target you can link against corresponding to the (lowercase) component name.
+target_link_libraries(simple-field-manipulation-direct-access PRIVATE opencmiss)
+
+# Add a simple test that runs the executable
+add_test(NAME test_simple-field-manipulation-direct-access COMMAND simple-field-manipulation-direct-access)
+add_opencmiss_environment(test_simple-field-manipulation-direct-access)
+
+###################
+# Developer notice!
+#
+# If you write Fortran code and use MPI, you need to use the following MPI directives:
+#
+# #ifndef NOMPIMOD
+#   USE MPI
+# #endif
+# [...]
+#   IMPLICIT NONE
+# [...]
+# #ifdef NOMPIMOD
+#     #include "mpif.h"
+# #endif
+#
+# Reasoning: In some cases like Windows/MPICH2 there sometimes is no mpi.mod file. In order to yet make
+# the example work the build system adds the definition 'NOMPIMOD', which can be checked and acted to accordingly.
+#
diff --git a/simple-field-manipulation-direct-access/src/simple-field-manipulation-direct-accessExample.f90 b/simple-field-manipulation-direct-access/Fortran/src/simple-field-manipulation-direct-accessExample.f90
similarity index 100%
rename from simple-field-manipulation-direct-access/src/simple-field-manipulation-direct-accessExample.f90
rename to simple-field-manipulation-direct-access/Fortran/src/simple-field-manipulation-direct-accessExample.f90
diff --git a/simple-field-manipulation-direct-access/OpenCMISS.cmake b/simple-field-manipulation-direct-access/OpenCMISS.cmake
new file mode 100644
index 00000000..3d6cf515
--- /dev/null
+++ b/simple-field-manipulation-direct-access/OpenCMISS.cmake
@@ -0,0 +1,95 @@
+###########################
+# *DO NOT CHANGE THIS FILE*
+###########################
+#
+# Prepares the use of OpenCMISS by scanning at various path locations for OpenCMISS (SDK) installations.
+#
+# Search order:
+#     - OPENCMISS_INSTALL_DIR variable
+#     - OPENCMISS_INSTALL_DIR environment variable
+#     - OPENCMISS_SDK_DIR variable
+#     - OPENCMISS_SDK_DIR environment variable
+#     - [Windows only] The Registry is searched additionally for installed SDKs.
+#
+# If found
+#     - Includes the toolchain config script of the found opencmiss installation to enable toolchain selection logic (non-windows)
+
+# Convenience: The OPENCMISS_INSTALL_DIR may also be defined in the environment and various other places
+if (DEFINED OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using specified installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The specified OPENCMISS_INSTALL_DIR '${OPENCMISS_INSTALL_DIR}' does not exist. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_INSTALL_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_INSTALL_DIR}" OPENCMISS_INSTALL_DIR)
+    get_filename_component(OPENCMISS_INSTALL_DIR "${OPENCMISS_INSTALL_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+        message(STATUS "Using environment installation directory '${OPENCMISS_INSTALL_DIR}'")
+    else()
+        message(WARNING "The environment variable OPENCMISS_INSTALL_DIR='${OPENCMISS_INSTALL_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_INSTALL_DIR)
+    endif()
+endif()
+if (NOT OPENCMISS_INSTALL_DIR AND DEFINED OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The specified OPENCMISS_SDK_DIR '${OPENCMISS_SDK_DIR}' does not exist. Skipping.")
+    endif()
+endif()    
+if(NOT OPENCMISS_INSTALL_DIR AND NOT "$ENV{OPENCMISS_SDK_DIR}" STREQUAL "")
+    file(TO_CMAKE_PATH "$ENV{OPENCMISS_SDK_DIR}" OPENCMISS_SDK_DIR)
+    get_filename_component(OPENCMISS_SDK_DIR "${OPENCMISS_SDK_DIR}" ABSOLUTE)
+    if (EXISTS "${OPENCMISS_SDK_DIR}")
+        message(STATUS "Using environment SDK installation directory: ${OPENCMISS_SDK_DIR}")
+        set(OPENCMISS_INSTALL_DIR "${OPENCMISS_SDK_DIR}")
+    else()
+        message(WARNING "The environment variable OPENCMISS_SDK_DIR='${OPENCMISS_SDK_DIR}' contains an invalid path. Skipping.")
+        unset(OPENCMISS_SDK_DIR)
+    endif()
+endif()
+# On windows: check the registry for installed OpenCMISS SDKs
+if(NOT OPENCMISS_INSTALL_DIR AND WIN32)
+    foreach(ROOT HKEY_CURRENT_USER HKEY_LOCAL_MACHINE)
+        foreach(PACKAGE OpenCMISSUserSDK OpenCMISSDeveloperSDK)
+            set(_REG_KEY "[${ROOT}\\Software\\Auckland Bioengineering Institute\\${PACKAGE}]")
+            get_filename_component(OPENCMISS_INSTALL_DIR "${_REG_KEY}" ABSOLUTE)
+            #message(STATUS "Trying registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+            if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+                message(STATUS "Found ${PACKAGE} in Windows registry key ${_REG_KEY}: ${OPENCMISS_INSTALL_DIR}")
+                break()
+            else()
+                unset(OPENCMISS_INSTALL_DIR)
+            endif()         
+        endforeach()
+        if (EXISTS "${OPENCMISS_INSTALL_DIR}")
+            break()
+        endif()
+    endforeach()
+endif()
+
+if(OPENCMISS_INSTALL_DIR)
+    message(STATUS "OPENCMISS_INSTALL_DIR=${OPENCMISS_INSTALL_DIR}")
+    # Use the OpenCMISS scripts to also allow choosing a separate toolchain
+    # This file is located at the opencmiss installation rather than the local example
+    # as it avoids file replication and makes maintenance much easier
+    if (TOOLCHAIN)
+        set(_OCTC ${OPENCMISS_INSTALL_DIR}/cmake/OCToolchainCompilers.cmake)
+        if (EXISTS "${_OCTC}")
+            include(${_OCTC})
+        else()
+            message(WARNING "TOOLCHAIN specified but OpenCMISS config script could not be found at ${_OCTC}. Trying CMake defaults.")
+        endif()
+        unset(_OCTC)
+    endif()
+    set(OpenCMISS_DIR "${OPENCMISS_INSTALL_DIR}" CACHE PATH "Path to the found OpenCMISS (SDK) installation")    
+else()
+    message(WARNING "No OpenCMISS (SDK) installation directory detected. Using default system environment.")
+endif()
+ 
\ No newline at end of file
diff --git a/simple-field-manipulation-direct-access/build_debug/build.sh b/simple-field-manipulation-direct-access/build_debug/build.sh
new file mode 100644
index 00000000..e6624bac
--- /dev/null
+++ b/simple-field-manipulation-direct-access/build_debug/build.sh
@@ -0,0 +1,2 @@
+#ccc && cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all
+cmake -DOPENCMISS_BUILD_TYPE=DEBUG -DCMAKE_BUILD_TYPE=DEBUG  .. && make all