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######################################################################
# Below is mostly taken from the web. Common things to ignore for C++
######################################################################
# Compiled files
*.slo
*.lo
*.o
*.Plo
*.so
*.dylib
*.lai
*.la
*.a
# Temporary files
*.swp
*~
*#
.#*
# Backup files
*.bk
*.backup
# Ctags files
tags
TAGS
# Build files
Makefile
Makefile.in
*.deps/
make_check_output
# Other version control systems
.svn/
# Callgrind output
callgrind.out.*
# Documentation files
*.pdf
latex/
html/
*header.html
*txt_doxygenified.*
doc/index/oomph_index.txt
doc/picture_show/rotate_gifs.php
doc/the_data_structure/doxygen_entrydb_*.tmp
doc/the_data_structure/doxygen_objdb_*.tmp
# Files generated by automake 1.13 test harness
test-suite.log
validate.sh.log
validate.sh.trs
test-driver
self_test/analyse_self_tests/analyse.sh.log
self_test/analyse_self_tests/analyse.sh.trs
########################################
# Oomph-lib specific generated files
########################################
# User drivers should go in your own version control I guess
user_drivers/
# private OOMPH-LIB directory configure lists are automatically generated.
config/configure.ac_scripts/private.dir_list
config/configure.ac_scripts/private_user_drivers.dir_list
config/configure.ac_scripts/private_user_src.dir_list
config/configure.ac_scripts/makefile_list
config/configure.ac_scripts/new_makefile_list
# So is the automake init command
config/configure.ac_scripts/automake_init_command_file
validation.log
config/configure.ac_scripts/user_drivers.dir_list
config/configure.ac_scripts/user_drivers.dir_list.backup
config/configure_options/current
demo_drivers/*/Validation/
demo_drivers/*/*/Validation/
demo_drivers/*/*/*/Validation/
self_test/*/Validation
self_test/*/*/Validation
make_check_output
aclocal.m4
autogen_fresh.dat
autom4te.cache/
build/
config.guess
config.h
config.h.in
config.log
config.status*
config.sub
configure
depcomp
install-sh
libtool
ltmain.sh
missing
old_symbolic_links.txt
oomph-lib-config.h
stamp-h1
config.cache
doc/the_distribution/joe_cool_makefile.am
doc/the_distribution/linked_make_file.am
compile
# Some binaries/scripts that are generated
bin/create_fluid_and_solid_surface_mesh_from_fluid_xda_mesh
bin/txt2h.sh
bin/minimal_mpi_test
external_distributions/hypre/build_script.bash
external_distributions/trilinos/build_script.bash
# Hypre/Trilinos build files
external_distributions/hypre/hypre-*
external_distributions/hypre/hypre_default_installation/
external_distributions/trilinos/trilinos-*
external_distributions/trilinos/trilinos_default_installation/
# arpack and hsl files which are automatically generated.
external_src/oomph_arpack/all_arpack_sources.f
external_src/oomph_arpack/debug.h
external_src/oomph_arpack/stat.h
external_src/oomph_hsl/frontal.f
# Files generated by automake 1.13 test harness
test-suite.log
validate.sh.log
validate.sh.trs
test-driver
self_test/analyse_self_tests/analyse.sh.log
self_test/analyse_self_tests/analyse.sh.trs
# Junk generated by demo_drivers/interaction/fsi_channel_seg_and_precond
demo_drivers/interaction/fsi_channel_seg_and_precond/STEADY_PRECONDITIONED_*
demo_drivers/interaction/fsi_channel_seg_and_precond/UNSTEADY_PRECONDITIONED_*
demo_drivers/interaction/fsi_channel_seg_and_precond/STEADY_SEGREGATED_*
################################################################
# Auto generated list of binaries etc.
# Generated using "git ls-files --other --exclude-standard | xclip"
################################################################
demo_drivers/FAQ/broken_this_demo
demo_drivers/FAQ/customising_output
demo_drivers/advection_diffusion/two_d_adv_diff_SUPG/two_d_adv_diff_SUPG
demo_drivers/advection_diffusion/two_d_adv_diff_adapt/two_d_adv_diff_adapt
demo_drivers/advection_diffusion/two_d_adv_diff_adapt/two_d_adv_diff_adapt2
demo_drivers/advection_diffusion/two_d_adv_diff_flux_bc/two_d_adv_diff_flux_bc
demo_drivers/advection_diffusion/two_d_variable_diff/two_d_variable_diff_adapt
demo_drivers/axisym_advection_diffusion/pipe/pipe
demo_drivers/axisym_advection_diffusion/pipe/pipe_variable_diff
demo_drivers/axisym_displ_based_foeppl_von_karman/axisym_displ_based_fvk
demo_drivers/axisym_foeppl_von_karman/axisym_fvk
demo_drivers/axisym_linear_elasticity/cylinder/cylinder
demo_drivers/axisym_navier_stokes/axi_static_cap/axi_static_cap
demo_drivers/axisym_navier_stokes/counter_rotating_disks/counter_rotating_disks
demo_drivers/axisym_navier_stokes/counter_rotating_disks/counter_rotating_disks_ref
demo_drivers/axisym_navier_stokes/fibre/fibre
demo_drivers/axisym_navier_stokes/rayleigh_instability/rayleigh_instability
demo_drivers/axisym_navier_stokes/rotating_ends/rotating_ends
demo_drivers/axisym_navier_stokes/single_layer_free_surface_axisym/single_layer_free_surface_axisym
demo_drivers/axisym_navier_stokes/spin_up/spin_up
demo_drivers/axisym_navier_stokes/torus/torus
demo_drivers/axisym_navier_stokes/two_fluid_spherical_cap/two_fluid_spherical_cap
demo_drivers/axisym_navier_stokes/two_layer_interface_axisym/elastic_two_layer_interface_axisym
demo_drivers/axisym_navier_stokes/two_layer_interface_axisym/spine_two_layer_interface_axisym
demo_drivers/axisym_navier_stokes/unstructured_torus/unstructured_torus
demo_drivers/axisym_poroelasticity/unstructured_two_d_curved/adaptive_unstructured_two_d_curved
demo_drivers/axisym_poroelasticity/unstructured_two_d_curved/unstructured_two_d_curved
demo_drivers/beam/steady_ring/steady_ring
demo_drivers/beam/steady_third_ring/steady_third_ring
demo_drivers/beam/tensioned_string/tensioned_string
demo_drivers/beam/unsteady_ring/lin_unsteady_ring
demo_drivers/beam/unsteady_ring/unsteady_ring
demo_drivers/bifurcation_tracking/adaptive_hopf
demo_drivers/bifurcation_tracking/adaptive_pitchfork
demo_drivers/bifurcation_tracking/fold
demo_drivers/bifurcation_tracking/hopf
demo_drivers/bifurcation_tracking/periodic_orbit
demo_drivers/bifurcation_tracking/pitchfork
demo_drivers/bifurcation_tracking/track_pitch
demo_drivers/biharmonic/structured_2d_biharmonic/structured_2d_biharmonic_bellelement
demo_drivers/biharmonic/two_d_biharmonic/two_d_biharmonic
demo_drivers/biharmonic/unstructured_2d_biharmonic/unstructured_2d_biharmonic_bellelement
demo_drivers/biharmonic/unstructured_2d_biharmonic/unstructured_2d_biharmonic_curvedelement
demo_drivers/darcy/unstructured_two_d_circle/adaptive_unstructured_two_d_circle
demo_drivers/darcy/unstructured_two_d_circle/unstructured_two_d_circle
demo_drivers/flux_transport/advection/one_d_advection
demo_drivers/flux_transport/advection/two_d_advection
demo_drivers/flux_transport/euler/couette
demo_drivers/flux_transport/euler/ff_step
demo_drivers/flux_transport/euler/one_d_euler
demo_drivers/flux_transport/euler/ramp
demo_drivers/flux_transport/euler/two_d_euler
demo_drivers/foeppl_von_karman/circular_disk/circular_disk
demo_drivers/fourier_decomposed_helmholtz/sphere_scattering/sphere_scattering
demo_drivers/fourier_decomposed_helmholtz/sphere_scattering/unstructured_adaptive_sphere_scattering
demo_drivers/fourier_decomposed_helmholtz/sphere_scattering/unstructured_sphere_scattering
demo_drivers/generalised_fourier_decomposed_helmholtz/oscillating_sphere/adaptive_oscillating_sphere
demo_drivers/generalised_fourier_decomposed_helmholtz/oscillating_sphere/oscillating_sphere
demo_drivers/generalised_helmholtz/scattering/unstructured_two_d_helmholtz
demo_drivers/generalised_helmholtz/scattering/unstructured_two_d_helmholtz_adapt
demo_drivers/generalised_helmholtz/scattering/unstructured_two_d_helmholtz_scattering
demo_drivers/generalised_time_harmonic_linear_elasticity/time_harmonic_elasticity_driver
demo_drivers/generalised_time_harmonic_linear_elasticity/time_harmonic_elasticity_driver_source
demo_drivers/heat_transfer_and_melting/two_d_unsteady_heat_melt/melt
demo_drivers/heat_transfer_and_melting/two_d_unsteady_heat_melt/pretend_melt
demo_drivers/heat_transfer_and_melting/two_d_unsteady_heat_melt/spring_contact
demo_drivers/heat_transfer_and_melting/two_d_unsteady_heat_melt/stefan_boltzmann
demo_drivers/heat_transfer_and_melting/two_d_unsteady_heat_melt/stefan_boltzmann_melt
demo_drivers/helmholtz/point_source/adaptive_helmholtz_point_source
demo_drivers/helmholtz/point_source/helmholtz_point_source
demo_drivers/helmholtz/scattering/adaptive_scattering
demo_drivers/helmholtz/scattering/adaptive_unstructured_scattering
demo_drivers/helmholtz/scattering/scattering
demo_drivers/helmholtz/scattering/unstructured_scattering
demo_drivers/homogenisation/two_dim/two_dim
demo_drivers/homogenisation/two_dim/two_dim_hex
demo_drivers/interaction/acoustic_fsi/acoustic_fsi
demo_drivers/interaction/acoustic_fsi/unstructured_acoustic_fsi
demo_drivers/interaction/elastic_bretherton/elastic_bretherton
demo_drivers/interaction/fourier_decomposed_acoustic_fsi/adaptive_unstructured_fourier_decomposed_acoustic_fsi
demo_drivers/interaction/fourier_decomposed_acoustic_fsi/fourier_decomposed_acoustic_fsi
demo_drivers/interaction/fourier_decomposed_acoustic_fsi/unstructured_fourier_decomposed_acoustic_fsi
demo_drivers/interaction/free_boundary_poisson/algebraic_free_boundary_poisson
demo_drivers/interaction/free_boundary_poisson/circle
demo_drivers/interaction/free_boundary_poisson/doc_sparse_macro_node_update
demo_drivers/interaction/free_boundary_poisson/elastic_poisson
demo_drivers/interaction/free_boundary_poisson/free_boundary_poisson_with_elastic_mesh_update
demo_drivers/interaction/free_boundary_poisson/geom_object_element
demo_drivers/interaction/free_boundary_poisson/macro_element_free_boundary_poisson
demo_drivers/interaction/free_boundary_poisson/macro_element_free_boundary_poisson_non_ref
demo_drivers/interaction/free_boundary_poisson/old_macro_element_free_boundary_poisson_for_doc
demo_drivers/interaction/fsi_channel_seg_and_precond/fsi_collapsible_channel_precond_driver
demo_drivers/interaction/fsi_channel_seg_and_precond/fsi_collapsible_channel_segregated_driver
demo_drivers/interaction/fsi_channel_seg_and_precond/simple_segregated_driver
demo_drivers/interaction/fsi_channel_with_leaflet/fsi_channel_with_leaflet
demo_drivers/interaction/fsi_collapsible_channel/fsi_collapsible_channel_algebraic_CR
demo_drivers/interaction/fsi_collapsible_channel/fsi_collapsible_channel_algebraic_TH
demo_drivers/interaction/fsi_collapsible_channel/fsi_collapsible_channel_algebraic_adapt_CR
demo_drivers/interaction/fsi_collapsible_channel/fsi_collapsible_channel_algebraic_adapt_TH
demo_drivers/interaction/fsi_collapsible_channel/fsi_collapsible_channel_macro_CR
demo_drivers/interaction/fsi_collapsible_channel/fsi_collapsible_channel_macro_TH
demo_drivers/interaction/fsi_collapsible_channel/fsi_collapsible_channel_macro_adapt_CR
demo_drivers/interaction/fsi_collapsible_channel/fsi_collapsible_channel_macro_adapt_TH
demo_drivers/interaction/fsi_collapsible_channel/fsi_pseudo_solid_collapsible_channel_CR
demo_drivers/interaction/fsi_collapsible_channel/fsi_pseudo_solid_collapsible_channel_TH
demo_drivers/interaction/fsi_collapsible_channel/fsi_pseudo_solid_collapsible_channel_adapt_CR
demo_drivers/interaction/fsi_collapsible_channel/fsi_pseudo_solid_collapsible_channel_adapt_TH
demo_drivers/interaction/fsi_driven_cavity/fsi_driven_cavity_driver
demo_drivers/interaction/fsi_driven_cavity/fsi_driven_cavity_segregated_driver
demo_drivers/interaction/fsi_osc_ring/fsi_osc_ring
demo_drivers/interaction/fsi_osc_ring/fsi_osc_ring_compare_jacs
demo_drivers/interaction/fsi_osc_ring/osc_ring_alg
demo_drivers/interaction/fsi_osc_ring/osc_ring_macro
demo_drivers/interaction/linearised_fsi_pulsewave/linearised_fsi_pulsewave
demo_drivers/interaction/linearised_poroelastic_fsi_pulsewave/linearised_poroelastic_fsi_pulsewave
demo_drivers/interaction/pseudo_solid_collapsible_tube/pseudo_solid_collapsible_tube
demo_drivers/interaction/pseudo_solid_collapsible_tube/pseudo_solid_collapsible_tube_work
demo_drivers/interaction/pseudo_solid_fsi_channel_with_leaflet/fsi_channel_with_leaflet_precond
demo_drivers/interaction/turek_flag/turek_flag
demo_drivers/interaction/unsteady_vmtk_fsi/unsteady_vmtk_fsi
demo_drivers/interaction/unstructured_adaptive_fsi/unstructured_adaptive_2d_fsi
demo_drivers/interaction/unstructured_fsi/unstructured_two_d_fsi
demo_drivers/interaction/unstructured_three_d_fsi/unstructured_three_d_fsi
demo_drivers/interaction/vmtk_fsi/vmtk_fsi
demo_drivers/linear_elasticity/periodic_load/periodic_load
demo_drivers/linear_elasticity/periodic_load/refineable_periodic_load
demo_drivers/linear_solvers/HypreSolver_test
demo_drivers/linear_solvers/TrilinosSolver_test
demo_drivers/linear_solvers/adv_diff_iterative_linear_solver_tester
demo_drivers/linear_solvers/direct_solver_test
demo_drivers/linear_solvers/driven_cavity
demo_drivers/linear_solvers/two_d_linear_elasticity_with_simple_block_diagonal_preconditioner
demo_drivers/linear_solvers/two_d_poisson_cg
demo_drivers/linear_solvers/two_d_poisson_dense_lu
demo_drivers/linear_wave/two_d_linear_wave/two_d_linear_wave
demo_drivers/linear_wave/two_d_linear_wave/two_d_linear_wave_flux
demo_drivers/linear_wave/two_d_linear_wave_adapt/two_d_linear_wave_adapt
demo_drivers/linking/demo_code
demo_drivers/linking/makefile.sample
demo_drivers/linking/my_demo_code
demo_drivers/meshing/mesh_from_geompack/convert_geom_file
demo_drivers/meshing/mesh_from_geompack/mesh_from_geompack_poisson
demo_drivers/meshing/mesh_from_inline_triangle/mesh_from_inline_triangle
demo_drivers/meshing/mesh_from_inline_triangle/mesh_from_inline_triangle_no_adapt
demo_drivers/meshing/mesh_from_inline_triangle/mesh_from_inline_triangle_polygon
demo_drivers/meshing/mesh_from_inline_triangle_internal_boundaries/mesh_from_inline_triangle_internal_boundaries
demo_drivers/meshing/mesh_from_inline_triangle_internal_boundaries/mesh_from_inline_triangle_internal_boundaries_extra
demo_drivers/meshing/mesh_from_tetgen/mesh_from_tetgen_navier_stokes
demo_drivers/meshing/mesh_from_tetgen/mesh_from_tetgen_poisson
demo_drivers/meshing/mesh_from_triangle/mesh_from_triangle_navier_stokes
demo_drivers/meshing/mesh_from_triangle/mesh_from_triangle_poisson
demo_drivers/meshing/mesh_from_vmtk/create_fluid_and_solid_surface_mesh_from_fluid_xda_mesh
demo_drivers/meshing/mesh_from_xfig_triangle/mesh_from_xfig_navier_stokes
demo_drivers/meshing/mesh_from_xfig_triangle/mesh_from_xfig_poisson
demo_drivers/meshing/quadratic_vmtk_tetgen/snap_mesh
demo_drivers/meshing/quadratic_vmtk_tetgen/xda_to_poly_fsi
demo_drivers/multi_physics/3d_boussinesq_convection/3d_multimesh_ref_b_convect
demo_drivers/multi_physics/3d_boussinesq_convection/3d_ref_b_convect
demo_drivers/multi_physics/axisym_heat_sphere/axisym_heat_sphere
demo_drivers/multi_physics/axisym_heat_sphere/multi_domain_axisym_heat_sphere
demo_drivers/multi_physics/b_convection_sphere/b_convection_sphere
demo_drivers/multi_physics/b_convection_sphere/multi_domain_b_convect_sph
demo_drivers/multi_physics/boussinesq_convection/boussinesq_convection
demo_drivers/multi_physics/boussinesq_convection/boussinesq_convection_analytic
demo_drivers/multi_physics/boussinesq_convection/boussinesq_convection_fd
demo_drivers/multi_physics/boussinesq_convection/multi_domain_boussinesq_convection
demo_drivers/multi_physics/boussinesq_convection/multi_domain_ref_b_convection
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src/navier_stokes/navier_stokes.h
src/poisson/poisson.h
src/polar_navier_stokes/polar_navier_stokes.h
src/poroelasticity/poroelasticity.h
src/rigid_body/rigid_body.h
src/shell/shell.h
src/solid/solid.h
src/spherical_advection_diffusion/spherical_advection_diffusion.h
src/spherical_navier_stokes/spherical_navier_stokes.h
src/steady_axisym_advection_diffusion/steady_axisym_advection_diffusion.h
src/time_harmonic_fourier_decomposed_linear_elasticity/time_harmonic_fourier_decomposed_linear_elasticity.h
src/time_harmonic_linear_elasticity/time_harmonic_linear_elasticity.h
src/linearised_axisym_navier_stokes/linearised_axisym_navier_stokes.h
src/unsteady_heat/unsteady_heat.h
src/womersley/womersley.h
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demo_drivers/ode/imr_ode/imr_ode
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demo_drivers/heat_transfer_and_melting/result_spring_contact_kuhn_tucker.dat
demo_drivers/heat_transfer_and_melting/two_d_unsteady_heat_melt/OUTPUT
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demo_drivers/poisson/eighth_sphere_poisson_hp_adapt/eighth_sphere_poisson_hp_adapt
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