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Iso Seq Public Datasets

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Elizabeth Tseng edited this page Sep 8, 2021 · 23 revisions

Last Updated: 2021/09/07

Human - Single-Cell Iso-Seq

Key	Detail
Species	Mouse, postnatal brain
Sequencing	Sequel II
Analysis	Iso-Seq & R code
Data	GSE

Joglekar et al., "A spatially resolved brain region- and cell type-specific isoform atlas of the postnatal mouse brain", Nature Communications (2021)

Plant & Animal

Arabidopsis thaliana

Key	Detail
Species	A. thaliana, various tissues
Sequencing	Sequel I
Analysis	Iso-Seq & TAMA
Data	SRA PRJNA755474

Reference: Zhang et al. "A high resolution single molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis", biorxiv (2021)