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ChangeLog.md

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Change log for the PCRamp program

  • Version 0.3 (August 25, 2020)

    • Fixed a bug in random traget sequence selection step in PCR::random_assay().
    • Fixed formatting error in JSON output file ( missed a '\n' in write_json() ).
    • Added additional, synonymous command line arguments --T.prefix (a synonym for --target.prefix) and --B.prefix (a synonym for --background.prefix) to try to make the command line arguments internally consistent.
    • Modified confusing command line arguments to improve consistency
    • Removed the option of JSON-formatted input configuration file. This option can be added back, but this method of specifying the input configuration is currently not well-tested (and would need more detailed documentation to be useful).
  • Version 0.2 (April 23, 2020)

    • Improved the multiplex compatibility algorithm to better exclude overlapping amplicons.