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Defaults to placing log and tmp dirs in home dir #23

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afolarin opened this issue May 18, 2016 · 1 comment
Open

Defaults to placing log and tmp dirs in home dir #23

afolarin opened this issue May 18, 2016 · 1 comment

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@afolarin
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ngsprojectdir:
@echo "Make Top level project directories"
mkdir -v -p $(INSTALLDIR)/ngs_projects &&
mkdir -v -p $(INSTALLDIR)/ngs_projects/raw_fastq &&
mkdir -v -p $(INSTALLDIR)/ngs_projects/config_files &&
mkdir -v -p $(INSTALLDIR)/ngs_projects/run_logs &&
mkdir -v -p $(INSTALLDIR)/ngs_projects/ngseasy_resources &&
mkdir -v -p $(HOME)/ngseasy_logs &&
mkdir -v -p $(HOME)/ngseasy_tmp

should why put log and tmp in the home dir ?
mkdir -v -p $(HOME)/ngseasy_logs
mkdir -v -p $(HOME)/ngseasy_tmp

@snewhouse
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yeah - all this needs cleaning up...rush job

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