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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(beta_coal_block_size_alpha_mle)
export(beta_coalsim)
export(bias_new)
export(BNPR)
export(BNPR_Lambda)
export(BNPR_PS)
export(BNPR_PS_ada)
export(BNPR_multiple)
export(BNPR_samp_only)
export(BNPR_sel)
export(boombust_traj)
export(bottleneck_traj)
export(coalsim)
export(create_F)
export(dev_new)
export(dist_pairwise)
export(estimate_mu)
export(gen_Fmat)
export(cyclic_traj)
export(envelope_new)
export(exp_traj)
export(extract_out)
export(extract_spmrf)
export(find_info2)
export(gen_Amat)
export(generate_newick)
export(generate_newick_multif)
export(generate_newick_rand)
export(graph_gene_tree2)
export(hist2heat)
export(inference_all)
export(inference_times)
export(initial_MCMC)
export(initial_MCMC_het)
export(initial_tajima)
export(initial_tajima_het)
export(inla.models)
export(king_initial_sampnodes)
export(kingman_perphylo)
export(label_dist)
export(label_king)
export(log_samp_mat)
export(logistic_traj)
export(make_taxa)
export(mcmc_sampling)
export(mcmc_sampling_times)
export(mesa_traj)
export(ml_exp_coal)
export(MLE_BoundCoal)
export(mse)
export(plot_BEAST)
export(plot_BNPR)
export(plot_beta)
export(plot_mrw)
export(plot_res)
export(plot_seasonality)
export(posterior_beta_coal_hybrid)
export(posterior_beta_coal_MCMC_w_sHMC)
export(posterior_coal_check)
export(posterior_samp_check)
export(pref_sample)
export(rbeta_coal)
export(read_times)
export(reformat_slt)
export(sample_genealogy)
export(sample_tree)
export(sampsim_thin)
export(set_prec_parameters)
export(simulate_data)
export(simulate_data_het)
export(simulate_SLData)
export(siscount_tree)
export(sloped_traj)
export(smcp_sampling)
export(steep_cyc_traj)
export(subsample)
export(sufficient_stats)
export(summarize_multif_phylo)
export(summarize_phylo)
export(traj_beta)
export(unif_traj)
export(updateFmat_Markov_FREE)
export(updateFmat_Markov_FREE_het)
export(updateSingleTime)
export(updateTheta)
export(updateTheta_het)
export(updateTimes)
export(updateTimes_hetLocal)