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1.6.0-DEV-3bfcb743c2.log
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Julia Version 1.6.0-DEV.1185
Commit 3bfcb743c2 (2020-10-11 23:29 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: AMD EPYC 7502 32-Core Processor
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-10.0.1 (ORCJIT, znver2)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
JULIA_MAX_NUM_PRECOMPILE_FILES = 9223372036854775807
Resolving package versions...
Installed TreeViews ─────────────────── v0.3.0
Installed PyDSTool ──────────────────── v0.6.1
Installed Conda ─────────────────────── v1.4.1
Installed Tables ────────────────────── v1.1.0
Installed Parsers ───────────────────── v1.0.11
Installed Parameters ────────────────── v0.12.1
Installed JSON ──────────────────────── v0.21.1
Installed DiffEqBase ────────────────── v6.48.0
Installed LabelledArrays ────────────── v1.3.0
Installed RecursiveFactorization ────── v0.1.4
Installed RecursiveArrayTools ───────── v2.7.1
Installed OrderedCollections ────────── v1.3.1
Installed PyCall ────────────────────── v1.92.1
Installed MacroTools ────────────────── v0.5.5
Installed DataStructures ────────────── v0.18.7
Installed IterativeSolvers ──────────── v0.8.4
Installed OffsetArrays ──────────────── v1.3.1
Installed UnPack ────────────────────── v1.0.2
Installed CpuId ─────────────────────── v0.2.2
Installed SIMDPirates ───────────────── v0.8.25
Installed VectorizationBase ─────────── v0.12.33
Installed SLEEFPirates ──────────────── v0.5.5
Installed ChainRulesCore ────────────── v0.9.13
Installed StaticArrays ──────────────── v0.12.4
Installed RecipesBase ───────────────── v1.1.0
Installed DataValueInterfaces ───────── v1.0.0
Installed ArrayInterface ────────────── v2.13.4
Installed MuladdMacro ───────────────── v0.2.2
Installed DataAPI ───────────────────── v1.3.0
Installed ZygoteRules ───────────────── v0.2.0
Installed TableTraits ───────────────── v1.0.0
Installed Compat ────────────────────── v3.20.0
Installed DocStringExtensions ───────── v0.8.3
Installed Requires ──────────────────── v1.1.0
Installed FunctionWrappers ──────────── v1.1.1
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed VersionParsing ────────────── v1.2.0
Installed Roots ─────────────────────── v1.0.5
Installed LoopVectorization ─────────── v0.8.26
Updating `~/.julia/environments/v1.6/Project.toml`
[7186c646] + PyDSTool v0.6.1
Updating `~/.julia/environments/v1.6/Manifest.toml`
[4fba245c] + ArrayInterface v2.13.4
[d360d2e6] + ChainRulesCore v0.9.13
[34da2185] + Compat v3.20.0
[8f4d0f93] + Conda v1.4.1
[adafc99b] + CpuId v0.2.2
[9a962f9c] + DataAPI v1.3.0
[864edb3b] + DataStructures v0.18.7
[e2d170a0] + DataValueInterfaces v1.0.0
[2b5f629d] + DiffEqBase v6.48.0
[ffbed154] + DocStringExtensions v0.8.3
[069b7b12] + FunctionWrappers v1.1.1
[42fd0dbc] + IterativeSolvers v0.8.4
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.1
[2ee39098] + LabelledArrays v1.3.0
[bdcacae8] + LoopVectorization v0.8.26
[1914dd2f] + MacroTools v0.5.5
[46d2c3a1] + MuladdMacro v0.2.2
[6fe1bfb0] + OffsetArrays v1.3.1
[bac558e1] + OrderedCollections v1.3.1
[d96e819e] + Parameters v0.12.1
[69de0a69] + Parsers v1.0.11
[438e738f] + PyCall v1.92.1
[7186c646] + PyDSTool v0.6.1
[3cdcf5f2] + RecipesBase v1.1.0
[731186ca] + RecursiveArrayTools v2.7.1
[f2c3362d] + RecursiveFactorization v0.1.4
[ae029012] + Requires v1.1.0
[f2b01f46] + Roots v1.0.5
[21efa798] + SIMDPirates v0.8.25
[476501e8] + SLEEFPirates v0.5.5
[90137ffa] + StaticArrays v0.12.4
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v1.1.0
[a2a6695c] + TreeViews v0.3.0
[3a884ed6] + UnPack v1.0.2
[3d5dd08c] + VectorizationBase v0.12.33
[81def892] + VersionParsing v1.2.0
[700de1a5] + ZygoteRules v0.2.0
[56f22d72] + Artifacts
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[fa267f1f] + TOML
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building Conda ───────→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/7a58bb32ce5d85f8bf7559aa7c2842f9aecf52fc/build.log`
Building PyCall ──────→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b6dff5fa725eff4f775f472acd86756d6e31fb02/build.log`
Building SLEEFPirates → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/67ae90a18aa8c22bf159318300e765fbd89ddf6e/build.log`
Testing PyDSTool
Status `/tmp/jl_gW2GmZ/Project.toml`
[8f4d0f93] Conda v1.4.1
[864edb3b] DataStructures v0.18.7
[2b5f629d] DiffEqBase v6.48.0
[65888b18] ParameterizedFunctions v5.6.0
[438e738f] PyCall v1.92.1
[7186c646] PyDSTool v0.6.1
[3cdcf5f2] RecipesBase v1.1.0
[37e2e46d] LinearAlgebra
[8dfed614] Test
Status `/tmp/jl_gW2GmZ/Manifest.toml`
[c3fe647b] AbstractAlgebra v0.10.0
[ec485272] ArnoldiMethod v0.0.4
[4fba245c] ArrayInterface v2.13.4
[a603d957] CanonicalTraits v0.2.3
[d360d2e6] ChainRulesCore v0.9.13
[861a8166] Combinatorics v1.0.2
[34da2185] Compat v3.20.0
[e66e0078] CompilerSupportLibraries_jll v0.3.3+0
[8f4d0f93] Conda v1.4.1
[187b0558] ConstructionBase v1.0.0
[adafc99b] CpuId v0.2.2
[9a962f9c] DataAPI v1.3.0
[864edb3b] DataStructures v0.18.7
[e2d170a0] DataValueInterfaces v1.0.0
[2b5f629d] DiffEqBase v6.48.0
[c894b116] DiffEqJump v6.10.1
[b552c78f] DiffRules v1.0.1
[ffbed154] DocStringExtensions v0.8.3
[59287772] Formatting v0.4.1
[069b7b12] FunctionWrappers v1.1.1
[6b9d7cbe] GeneralizedGenerated v0.2.7
[615f187c] IfElse v0.1.0
[d25df0c9] Inflate v0.1.2
[42fd0dbc] IterativeSolvers v0.8.4
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.1
[b14d175d] JuliaVariables v0.2.3
[b964fa9f] LaTeXStrings v1.2.0
[2ee39098] LabelledArrays v1.3.0
[23fbe1c1] Latexify v0.14.0
[093fc24a] LightGraphs v1.3.0
[bdcacae8] LoopVectorization v0.8.26
[d8e11817] MLStyle v0.4.6
[1914dd2f] MacroTools v0.5.5
[961ee093] ModelingToolkit v3.21.0
[46d2c3a1] MuladdMacro v0.2.2
[77ba4419] NaNMath v0.3.4
[71a1bf82] NameResolution v0.1.5
[6fe1bfb0] OffsetArrays v1.3.1
[efe28fd5] OpenSpecFun_jll v0.5.3+3
[bac558e1] OrderedCollections v1.3.1
[65888b18] ParameterizedFunctions v5.6.0
[d96e819e] Parameters v0.12.1
[69de0a69] Parsers v1.0.11
[e409e4f3] PoissonRandom v0.4.0
[8162dcfd] PrettyPrint v0.2.0
[438e738f] PyCall v1.92.1
[7186c646] PyDSTool v0.6.1
[e6cf234a] RandomNumbers v1.4.0
[3cdcf5f2] RecipesBase v1.1.0
[731186ca] RecursiveArrayTools v2.7.1
[f2c3362d] RecursiveFactorization v0.1.4
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.1.0
[f2b01f46] Roots v1.0.5
[21efa798] SIMDPirates v0.8.25
[476501e8] SLEEFPirates v0.5.5
[1bc83da4] SafeTestsets v0.0.1
[699a6c99] SimpleTraits v0.9.3
[276daf66] SpecialFunctions v0.10.3
[90137ffa] StaticArrays v0.12.4
[d1185830] SymbolicUtils v0.5.1
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.1.0
[a759f4b9] TimerOutputs v0.5.6
[a2a6695c] TreeViews v0.3.0
[3a884ed6] UnPack v1.0.2
[1986cc42] Unitful v1.4.1
[3d5dd08c] VectorizationBase v0.12.33
[81def892] VersionParsing v1.2.0
[700de1a5] ZygoteRules v0.2.0
[56f22d72] Artifacts
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[fa267f1f] TOML
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Testing Running tests...
[ Info: Installing PyDSTool via the Conda pydstool package...
[ Info: Running `conda config --add channels conda-forge --file /home/pkgeval/.julia/conda/3/condarc-julia.yml --force` in root environment
[ Info: Running `conda install -q -y pydstool` in root environment
Collecting package metadata (current_repodata.json): ...working... done
Solving environment: ...working... done
## Package Plan ##
environment location: /home/pkgeval/.julia/conda/3
added / updated specs:
- pydstool
The following packages will be downloaded:
package | build
---------------------------|-----------------
ca-certificates-2020.6.20 | hecda079_0 145 KB conda-forge
certifi-2020.6.20 | py38h924ce5b_2 151 KB conda-forge
conda-4.8.5 | py38h924ce5b_2 3.0 MB conda-forge
libgfortran-ng-7.5.0 | hae1eefd_17 22 KB conda-forge
libgfortran4-7.5.0 | hae1eefd_17 1.3 MB conda-forge
openssl-1.1.1h | h516909a_0 2.1 MB conda-forge
pydstool-0.91.0 | pyh9f0ad1d_0 3.0 MB conda-forge
python_abi-3.8 | 1_cp38 4 KB conda-forge
scipy-1.5.2 | py38h0b6359f_0 14.5 MB
------------------------------------------------------------
Total: 24.2 MB
The following NEW packages will be INSTALLED:
libgfortran-ng conda-forge/linux-64::libgfortran-ng-7.5.0-hae1eefd_17
libgfortran4 conda-forge/linux-64::libgfortran4-7.5.0-hae1eefd_17
pydstool conda-forge/noarch::pydstool-0.91.0-pyh9f0ad1d_0
python_abi conda-forge/linux-64::python_abi-3.8-1_cp38
scipy pkgs/main/linux-64::scipy-1.5.2-py38h0b6359f_0
The following packages will be UPDATED:
certifi pkgs/main::certifi-2020.6.20-py38_0 --> conda-forge::certifi-2020.6.20-py38h924ce5b_2
conda pkgs/main::conda-4.8.5-py38_0 --> conda-forge::conda-4.8.5-py38h924ce5b_2
The following packages will be SUPERSEDED by a higher-priority channel:
ca-certificates pkgs/main::ca-certificates-2020.7.22-0 --> conda-forge::ca-certificates-2020.6.20-hecda079_0
openssl pkgs/main::openssl-1.1.1h-h7b6447c_0 --> conda-forge::openssl-1.1.1h-h516909a_0
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = build_ode(name::String, ics::Dict{String, Real}, pars::Dict{String, Float64}, vars::Dict{String, String}, tdomain::Vector{Int64}) at ode_construct_solve.jl:2
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/ode_construct_solve.jl:2
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = set_name(dsargs::PyObject, name::String) at constants.jl:16
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/constants.jl:16
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = set_ics(dsargs::PyObject, icdict::PyDict{String, Real, true}) at constants.jl:18
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/constants.jl:18
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = set_pars(dsargs::PyObject, pardict::PyDict{String, Float64, true}) at constants.jl:21
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/constants.jl:21
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = set_vars(dsargs::PyObject, vardict::PyDict{String, String, true}) at constants.jl:24
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/constants.jl:24
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = set_tdomain(dsargs::PyObject, tdomain::Vector{Int64}) at constants.jl:31
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/constants.jl:31
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = solve_ode(dsargs::PyObject, alg::Symbol, name::String) at ode_construct_solve.jl:25
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/ode_construct_solve.jl:25
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = solve_ode(dsargs::PyObject, alg::Symbol, name::String) at ode_construct_solve.jl:25
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/ode_construct_solve.jl:25
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = solve_ode(dsargs::PyObject, alg::Symbol, name::String) at ode_construct_solve.jl:26
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/ode_construct_solve.jl:26
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = interpert_traj(traj::PyObject) at ode_construct_solve.jl:38
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/ode_construct_solve.jl:38
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = interpert_traj(traj::PyObject) at ode_construct_solve.jl:38
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/ode_construct_solve.jl:38
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = interpert_traj(traj::PyObject) at ode_construct_solve.jl:39
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/ode_construct_solve.jl:39
Test Summary: |
Linear Solve | No tests
5.866887 seconds (5.35 M allocations: 316.893 MiB, 2.11% gc time, 93.93% compilation time)
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = build_ode(name::String, ics::Dict{String, Any}, pars::Dict{String, Any}, vars::Dict{String, Any}, tdomain::Vector{Int64}) at ode_construct_solve.jl:2
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/ode_construct_solve.jl:2
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = set_ics(dsargs::PyObject, icdict::PyDict{String, PyAny, true}) at constants.jl:18
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/constants.jl:18
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = set_pars(dsargs::PyObject, pardict::PyDict{String, PyAny, true}) at constants.jl:21
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/constants.jl:21
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = set_vars(dsargs::PyObject, vardict::PyDict{String, PyAny, true}) at constants.jl:24
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/constants.jl:24
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = top-level scope at calcium.jl:30
└ @ Core ~/.julia/packages/PyDSTool/zytsh/test/calcium.jl:30
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = top-level scope at calcium.jl:30
└ @ Core ~/.julia/packages/PyDSTool/zytsh/test/calcium.jl:30
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = top-level scope at calcium.jl:31
└ @ Core ~/.julia/packages/PyDSTool/zytsh/test/calcium.jl:31
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = top-level scope at calcium.jl:32
└ @ Core ~/.julia/packages/PyDSTool/zytsh/test/calcium.jl:32
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = top-level scope at calcium.jl:33
└ @ Core ~/.julia/packages/PyDSTool/zytsh/test/calcium.jl:33
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:88
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:88
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:89
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:89
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:90
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:90
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:91
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:91
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:92
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:92
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:93
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:93
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:94
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:94
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:95
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:95
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:96
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:96
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:97
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:97
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:98
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:98
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:99
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:99
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:105
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:105
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:107
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:107
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:107
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:107
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:112
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:112
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:112
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:112
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:117
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:117
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:117
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:117
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:131
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:131
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = (::PyDSTool.var"#6#7"{PyObject, String})(i::Int64) at none:0
└ @ PyDSTool ./none:0
┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead.
│ caller = (::PyDSTool.var"#6#7"{PyObject, String})(i::Int64) at none:0
└ @ PyDSTool ./none:0
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:140
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:140
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:141
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:141
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:141
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:141
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:142
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:142
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:142
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:142
┌ Warning: `getindex(o::PyObject, s::AbstractString)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o."s"` instead of `o["s"]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::Nothing, solver_sequence::Vector{Symbol}) at bifurcation.jl:142
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:142
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:88
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:88
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:89
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:89
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:90
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:90
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:91
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:91
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:92
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:92
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:93
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:93
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:94
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:94
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:95
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:95
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:96
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:96
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:97
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:97
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:98
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:98
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:99
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:99
┌ Warning: `setindex!(o::PyObject, v, s::Union{Symbol, AbstractString})` is deprecated in favor of `setproperty!(o, s, v)`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:101
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:101
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:105
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:105
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:107
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:107
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:107
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:107
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:112
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:112
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:112
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:112
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:117
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:117
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:117
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:117
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:131
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:131
┌ Warning: `getindex(o::PyObject, s::Symbol)` is deprecated in favor of dot overloading (`getproperty`) so elements should now be accessed as e.g. `o.s` instead of `o[:s]`.
│ caller = bifurcation_curve(PC::PyObject, bif_type::String, freepars::Vector{String}; max_num_points::Int64, max_stepsize::Int64, min_stepsize::Float64, stepsize::Float64, loc_bif_points::String, save_eigen::Bool, name::String, print_info::Bool, calc_stab::Bool, var_tol::Float64, func_tol::Float64, test_tol::Float64, initpoint::String, solver_sequence::Vector{Symbol}) at bifurcation.jl:140
└ @ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/bifurcation.jl:140
Test Summary: | Pass Total
Calcium Direct | 2 2
45.732117 seconds (2.81 M allocations: 177.282 MiB, 0.18% gc time, 7.67% compilation time)
Calcium Parameterized: Error During Test at /home/pkgeval/.julia/packages/PyDSTool/zytsh/test/runtests.jl:6
Got exception outside of a @test
LoadError: type Calcium has no field params
Stacktrace:
[1] getproperty(x::Function, f::Symbol)
@ Base ./Base.jl:33
[2] build_ode(f::Calcium{var"###ParameterizedDiffEqFunction#257", Nothing, Nothing, Nothing, Nothing, ODESystem}, u0::Vector{Int64}, tspan::Vector{Int64}, p::Vector{Float64})
@ PyDSTool ~/.julia/packages/PyDSTool/zytsh/src/ode_construct_solve.jl:14
[3] top-level scope
@ ~/.julia/packages/PyDSTool/zytsh/test/pf_calcium.jl:11
[4] include(fname::String)
@ Base.MainInclude ./client.jl:444
[5] macro expansion
@ ~/.julia/packages/PyDSTool/zytsh/test/runtests.jl:6 [inlined]
[6] macro expansion
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1144 [inlined]
[7] macro expansion
@ ~/.julia/packages/PyDSTool/zytsh/test/runtests.jl:6 [inlined]
[8] macro expansion
@ ./timing.jl:192 [inlined]
[9] macro expansion
@ ~/.julia/packages/PyDSTool/zytsh/test/runtests.jl:6 [inlined]
[10] top-level scope
@ ./timing.jl:192
[11] include(fname::String)
@ Base.MainInclude ./client.jl:444
[12] top-level scope
@ none:6
[13] eval(m::Module, e::Any)
@ Core ./boot.jl:360
[14] exec_options(opts::Base.JLOptions)
@ Base ./client.jl:261
[15] _start()
@ Base ./client.jl:485
in expression starting at /home/pkgeval/.julia/packages/PyDSTool/zytsh/test/pf_calcium.jl:11
Test Summary: | Error Total
Calcium Parameterized | 1 1
ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/PyDSTool/zytsh/test/runtests.jl:3
Warning: matplotlib failed to import properly and so is not
providing a graphing interface
LP Point found
LP Point found
PyCont curve EQ1 (type EP-C)
Using model: Calcium channel model
Model Info
----------
Variables : v, w
Parameters: gca, c, v2, v1, vl, vca, gl, i
Continuation Parameters
-----------------------
name = EQ1
auxpars = []
freepars = ['i']
MaxNumPoints = 450
MaxCorrIters = 5
MaxTestIters = 10
MaxStepSize = 2
MinStepSize = 1e-05
StepSize = 2
VarTol = 1e-06
FuncTol = 1e-06
TestTol = 0.0001
LocBifPoints = ['B', 'SP', 'BP', 'LP', 'H']
verbosity = 1
ClosedCurve = 50
SaveJacobian = False
SaveEigen = True
Corrector = <bound method Continuation._MoorePenrose of PyCont curve EQ1 (type EP-C)>
UseAuto = False
StopAtPoints = []
SPOut = None
Special Points
--------------
P1, P2, LP1, LP2
PyCont curve SN1 (type LP-C)
Using model: Calcium channel model
Model Info
----------
Variables : v, w
Parameters: gca, c, v2, v1, vl, vca, gl, i
Continuation Parameters
-----------------------
name = SN1
auxpars = []
freepars = ['i', 'gca']
MaxNumPoints = 200
MaxCorrIters = 5
MaxTestIters = 10
MaxStepSize = 2
MinStepSize = 1e-05
StepSize = 2
VarTol = 1e-06
FuncTol = 1e-06
TestTol = 0.0001
LocBifPoints = ['CP']
verbosity = 1
ClosedCurve = 50
SaveJacobian = False
SaveEigen = True
Corrector = <bound method Continuation._MoorePenrose of PyCont curve SN1 (type LP-C)>
UseAuto = False
StopAtPoints = []
SPOut = None
Special Points
--------------
P1, P2
ERROR: Package PyDSTool errored during testing
Stacktrace:
[1] pkgerror(msg::String)
@ Pkg.Types /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Types.jl:52
[2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing)
@ Pkg.Operations /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1609
[3] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:331
[4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:318
[5] #test#62
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:68 [inlined]
[6] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:68 [inlined]
[7] #test#61
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[8] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[9] test(pkg::String; kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[10] test(pkg::String)
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[11] top-level scope
@ none:31