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1.6.0-DEV-3bfcb743c2.log
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Julia Version 1.6.0-DEV.1185
Commit 3bfcb743c2 (2020-10-11 23:29 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: AMD EPYC 7502 32-Core Processor
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-10.0.1 (ORCJIT, znver2)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
JULIA_MAX_NUM_PRECOMPILE_FILES = 9223372036854775807
Resolving package versions...
Installed CompilerSupportLibraries_jll ─ v0.3.3+0
Installed Adapt ──────────────────────── v2.3.0
Installed OrderedCollections ─────────── v1.3.1
Installed GPUCompiler ────────────────── v0.6.1
Installed DataStructures ─────────────── v0.18.7
Installed NNlib ──────────────────────── v0.7.5
Installed GeophysicalFlows ───────────── v0.8.0
Installed LLVM ───────────────────────── v2.0.0
Installed MacroTools ─────────────────── v0.5.5
Installed JLD2 ───────────────────────── v0.2.3
Installed IntelOpenMP_jll ────────────── v2018.0.3+0
Installed FFTW ───────────────────────── v1.2.4
Installed OffsetArrays ───────────────── v1.3.1
Installed SpecialFunctions ───────────── v0.10.3
Installed TranscodingStreams ─────────── v0.9.5
Installed Ratios ─────────────────────── v0.4.0
Installed BinaryProvider ─────────────── v0.5.10
Installed FourierFlows ───────────────── v0.6.2
Installed JLLWrappers ────────────────── v1.1.1
Installed FFTW_jll ───────────────────── v3.3.9+5
Installed StaticArrays ───────────────── v0.12.4
Installed CEnum ──────────────────────── v0.4.1
Installed Compat ─────────────────────── v3.20.0
Installed AbstractFFTs ───────────────── v0.5.0
Installed WoodburyMatrices ───────────── v0.5.2
Installed MKL_jll ────────────────────── v2020.2.254+0
Installed AxisAlgorithms ─────────────── v1.0.0
Installed Zlib_jll ───────────────────── v1.2.11+17
Installed ExprTools ──────────────────── v0.1.2
Installed Requires ───────────────────── v1.1.0
Installed DocStringExtensions ────────── v0.8.3
Installed GPUArrays ──────────────────── v5.2.1
Installed CodecZlib ──────────────────── v0.7.0
Installed CUDA ───────────────────────── v1.3.3
Installed TimerOutputs ───────────────── v0.5.6
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed Reexport ───────────────────── v0.2.0
Installed Interpolations ─────────────── v0.12.10
Updating `~/.julia/environments/v1.6/Project.toml`
[44ee3b1c] + GeophysicalFlows v0.8.0
Updating `~/.julia/environments/v1.6/Manifest.toml`
[621f4979] + AbstractFFTs v0.5.0
[79e6a3ab] + Adapt v2.3.0
[13072b0f] + AxisAlgorithms v1.0.0
[b99e7846] + BinaryProvider v0.5.10
[fa961155] + CEnum v0.4.1
[052768ef] + CUDA v1.3.3
[944b1d66] + CodecZlib v0.7.0
[34da2185] + Compat v3.20.0
[e66e0078] + CompilerSupportLibraries_jll v0.3.3+0
[864edb3b] + DataStructures v0.18.7
[ffbed154] + DocStringExtensions v0.8.3
[e2ba6199] + ExprTools v0.1.2
[7a1cc6ca] + FFTW v1.2.4
[f5851436] + FFTW_jll v3.3.9+5
[2aec4490] + FourierFlows v0.6.2
[0c68f7d7] + GPUArrays v5.2.1
[61eb1bfa] + GPUCompiler v0.6.1
[44ee3b1c] + GeophysicalFlows v0.8.0
[1d5cc7b8] + IntelOpenMP_jll v2018.0.3+0
[a98d9a8b] + Interpolations v0.12.10
[033835bb] + JLD2 v0.2.3
[692b3bcd] + JLLWrappers v1.1.1
[929cbde3] + LLVM v2.0.0
[856f044c] + MKL_jll v2020.2.254+0
[1914dd2f] + MacroTools v0.5.5
[872c559c] + NNlib v0.7.5
[6fe1bfb0] + OffsetArrays v1.3.1
[efe28fd5] + OpenSpecFun_jll v0.5.3+3
[bac558e1] + OrderedCollections v1.3.1
[c84ed2f1] + Ratios v0.4.0
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.1.0
[276daf66] + SpecialFunctions v0.10.3
[90137ffa] + StaticArrays v0.12.4
[a759f4b9] + TimerOutputs v0.5.6
[3bb67fe8] + TranscodingStreams v0.9.5
[efce3f68] + WoodburyMatrices v0.5.2
[83775a58] + Zlib_jll v1.2.11+17
[56f22d72] + Artifacts
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[fa267f1f] + TOML
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building FFTW → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/8b7c16b56936047ca41bf25effa137ae0b381ae8/build.log`
Testing GeophysicalFlows
Status `/tmp/jl_8OQy20/Project.toml`
[052768ef] CUDA v1.3.3
[a2441757] Coverage v1.1.1
[7a1cc6ca] FFTW v1.2.4
[2aec4490] FourierFlows v0.6.2
[44ee3b1c] GeophysicalFlows v0.8.0
[033835bb] JLD2 v0.2.3
[189a3867] Reexport v0.2.0
[276daf66] SpecialFunctions v0.10.3
[90137ffa] StaticArrays v0.12.4
[37e2e46d] LinearAlgebra
[9a3f8284] Random
[10745b16] Statistics
[8dfed614] Test
Status `/tmp/jl_8OQy20/Manifest.toml`
[621f4979] AbstractFFTs v0.5.0
[79e6a3ab] Adapt v2.3.0
[13072b0f] AxisAlgorithms v1.0.0
[b99e7846] BinaryProvider v0.5.10
[fa961155] CEnum v0.4.1
[052768ef] CUDA v1.3.3
[944b1d66] CodecZlib v0.7.0
[34da2185] Compat v3.20.0
[e66e0078] CompilerSupportLibraries_jll v0.3.3+0
[a2441757] Coverage v1.1.1
[c36e975a] CoverageTools v1.1.0
[864edb3b] DataStructures v0.18.7
[ffbed154] DocStringExtensions v0.8.3
[e2ba6199] ExprTools v0.1.2
[7a1cc6ca] FFTW v1.2.4
[f5851436] FFTW_jll v3.3.9+5
[2aec4490] FourierFlows v0.6.2
[0c68f7d7] GPUArrays v5.2.1
[61eb1bfa] GPUCompiler v0.6.1
[44ee3b1c] GeophysicalFlows v0.8.0
[cd3eb016] HTTP v0.8.19
[83e8ac13] IniFile v0.5.0
[1d5cc7b8] IntelOpenMP_jll v2018.0.3+0
[a98d9a8b] Interpolations v0.12.10
[033835bb] JLD2 v0.2.3
[692b3bcd] JLLWrappers v1.1.1
[682c06a0] JSON v0.21.1
[929cbde3] LLVM v2.0.0
[856f044c] MKL_jll v2020.2.254+0
[1914dd2f] MacroTools v0.5.5
[739be429] MbedTLS v1.0.2
[c8ffd9c3] MbedTLS_jll v2.16.8+0
[872c559c] NNlib v0.7.5
[6fe1bfb0] OffsetArrays v1.3.1
[efe28fd5] OpenSpecFun_jll v0.5.3+3
[bac558e1] OrderedCollections v1.3.1
[69de0a69] Parsers v1.0.11
[c84ed2f1] Ratios v0.4.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.1.0
[276daf66] SpecialFunctions v0.10.3
[90137ffa] StaticArrays v0.12.4
[a759f4b9] TimerOutputs v0.5.6
[3bb67fe8] TranscodingStreams v0.9.5
[efce3f68] WoodburyMatrices v0.5.2
[83775a58] Zlib_jll v1.2.11+17
[56f22d72] Artifacts
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[fa267f1f] TOML
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Testing Running tests...
[ Info: FourierFlows will use 2 threads
[ Info: FourierFlows will use 2 threads
ERROR: LoadError: LoadError: UndefVarError: getfieldspecs not defined
Stacktrace:
[1] include(mod::Module, _path::String)
@ Base ./Base.jl:389
[2] include(x::String)
@ GeophysicalFlows ~/.julia/packages/GeophysicalFlows/mZXo8/src/GeophysicalFlows.jl:1
[3] top-level scope
@ ~/.julia/packages/GeophysicalFlows/mZXo8/src/GeophysicalFlows.jl:13
[4] include
@ ./Base.jl:389 [inlined]
[5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt64}}, source::String)
@ Base ./loading.jl:1225
[6] top-level scope
@ none:1
[7] eval
@ ./boot.jl:360 [inlined]
[8] eval(x::Expr)
@ Base.MainInclude ./client.jl:446
[9] top-level scope
@ none:1
in expression starting at /home/pkgeval/.julia/packages/GeophysicalFlows/mZXo8/src/barotropicqg.jl:1
in expression starting at /home/pkgeval/.julia/packages/GeophysicalFlows/mZXo8/src/GeophysicalFlows.jl:1
ERROR: LoadError: Failed to precompile GeophysicalFlows [44ee3b1c-bc02-53fa-8355-8e347616e15e] to /home/pkgeval/.julia/compiled/v1.6/GeophysicalFlows/xFqhg_PO3Um.ji.
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:33
[2] compilecache(pkg::Base.PkgId, path::String, show_errors::Bool, do_logging::Bool)
@ Base ./loading.jl:1360
[3] compilecache
@ ./loading.jl:1313 [inlined]
[4] _require(pkg::Base.PkgId)
@ Base ./loading.jl:1033
[5] require(uuidkey::Base.PkgId)
@ Base ./loading.jl:926
[6] require(into::Module, mod::Symbol)
@ Base ./loading.jl:913
[7] include(fname::String)
@ Base.MainInclude ./client.jl:444
[8] top-level scope
@ none:6
in expression starting at /home/pkgeval/.julia/packages/GeophysicalFlows/mZXo8/test/runtests.jl:9
ERROR: Package GeophysicalFlows errored during testing
Stacktrace:
[1] pkgerror(msg::String)
@ Pkg.Types /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Types.jl:52
[2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing)
@ Pkg.Operations /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1609
[3] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:331
[4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:318
[5] #test#62
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:68 [inlined]
[6] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:68 [inlined]
[7] #test#61
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[8] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[9] test(pkg::String; kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[10] test(pkg::String)
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[11] top-level scope
@ none:31