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1.6.0-DEV-3bfcb743c2.log
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Julia Version 1.6.0-DEV.1185
Commit 3bfcb743c2 (2020-10-11 23:29 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: AMD EPYC 7502 32-Core Processor
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-10.0.1 (ORCJIT, znver2)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
JULIA_MAX_NUM_PRECOMPILE_FILES = 9223372036854775807
Resolving package versions...
Installed XML2_jll ─────────── v2.9.10+2
Installed MbedTLS_jll ──────── v2.16.8+0
Installed IniFile ──────────── v0.5.0
Installed OrderedCollections ─ v1.3.1
Installed MbedTLS ──────────── v1.0.2
Installed BioServices ──────── v0.3.2
Installed HTTP ─────────────── v0.8.19
Installed JLLWrappers ──────── v1.1.1
Installed Libiconv_jll ─────── v1.16.0+6
Installed AbstractTrees ────── v0.3.3
Installed Zlib_jll ─────────── v1.2.11+17
Installed IterTools ────────── v1.3.0
Installed Gumbo ────────────── v0.8.0
Installed EzXML ────────────── v1.1.0
Installed JSON ─────────────── v0.21.1
Installed XMLDict ──────────── v0.4.1
Installed Gumbo_jll ────────── v0.10.1+1
Installed Parsers ──────────── v1.0.11
Updating `~/.julia/environments/v1.6/Project.toml`
[a0d4ced5] + BioServices v0.3.2
Updating `~/.julia/environments/v1.6/Manifest.toml`
[1520ce14] + AbstractTrees v0.3.3
[a0d4ced5] + BioServices v0.3.2
[8f5d6c58] + EzXML v1.1.0
[708ec375] + Gumbo v0.8.0
[528830af] + Gumbo_jll v0.10.1+1
[cd3eb016] + HTTP v0.8.19
[83e8ac13] + IniFile v0.5.0
[c8e1da08] + IterTools v1.3.0
[692b3bcd] + JLLWrappers v1.1.1
[682c06a0] + JSON v0.21.1
[94ce4f54] + Libiconv_jll v1.16.0+6
[739be429] + MbedTLS v1.0.2
[c8ffd9c3] + MbedTLS_jll v2.16.8+0
[bac558e1] + OrderedCollections v1.3.1
[69de0a69] + Parsers v1.0.11
[02c8fc9c] + XML2_jll v2.9.10+2
[228000da] + XMLDict v0.4.1
[83775a58] + Zlib_jll v1.2.11+17
[56f22d72] + Artifacts
[2a0f44e3] + Base64
[ade2ca70] + Dates
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[6462fe0b] + Sockets
[fa267f1f] + TOML
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing BioServices
Status `/tmp/jl_wXYw4X/Project.toml`
[a0d4ced5] BioServices v0.3.2
[708ec375] Gumbo v0.8.0
[cd3eb016] HTTP v0.8.19
[682c06a0] JSON v0.21.1
[228000da] XMLDict v0.4.1
[ade2ca70] Dates
[8dfed614] Test
Status `/tmp/jl_wXYw4X/Manifest.toml`
[1520ce14] AbstractTrees v0.3.3
[a0d4ced5] BioServices v0.3.2
[8f5d6c58] EzXML v1.1.0
[708ec375] Gumbo v0.8.0
[528830af] Gumbo_jll v0.10.1+1
[cd3eb016] HTTP v0.8.19
[83e8ac13] IniFile v0.5.0
[c8e1da08] IterTools v1.3.0
[692b3bcd] JLLWrappers v1.1.1
[682c06a0] JSON v0.21.1
[94ce4f54] Libiconv_jll v1.16.0+6
[739be429] MbedTLS v1.0.2
[c8ffd9c3] MbedTLS_jll v2.16.8+0
[bac558e1] OrderedCollections v1.3.1
[69de0a69] Parsers v1.0.11
[02c8fc9c] XML2_jll v2.9.10+2
[228000da] XMLDict v0.4.1
[83775a58] Zlib_jll v1.2.11+17
[56f22d72] Artifacts
[2a0f44e3] Base64
[ade2ca70] Dates
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[6462fe0b] Sockets
[fa267f1f] TOML
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Testing Running tests...
Running tests:
-----------------------------------------
-----------------------------------------
Testing: EUtils
-----------------------------------------
-----------------------------------------
Test Summary: | Pass Total
EUtils | 45 45
-----------------------------------------
-----------------------------------------
Testing: UMLS
-----------------------------------------
-----------------------------------------
┌ Warning: UMLS tests could not run: Set up credentials as enviroment variables: UMLS_USER, UMLS_PSSWD and UMLS_APIKEY
└ @ Main.TestBioServices ~/.julia/packages/BioServices/KPZxN/test/umls.jl:13
Test Summary: |
UMLS | No tests
-----------------------------------------
-----------------------------------------
Testing: GGGenome
-----------------------------------------
-----------------------------------------
Test Summary: | Pass Total
GGGenome | 6 6
Testing BioServices tests passed